| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160873772
Identifier: 160873772
GI number: 160873772
Start: 784935
End: 786305
Strand: Direct
Name: 160873772
Synonym: Sbal195_0650
Alternate gene names: NA
Gene position: 784935-786305 (Clockwise)
Preceding gene: 160873770
Following gene: 160873773
Centisome position: 14.68
GC content: 44.57
Gene sequence:
>1371_bases ATGATAAAAAGTAAGCTAAAGGGATTCGCTGCGGTGACTGTTGCCTGTTTAGCGGTAACGGCATGTGGCTCAGACAGCAA TAATGAAGATGGAACAGATCAGAATGCCACCTATGTGCAATTCTATAACGCTTCGGCCGGAAGCACAGCAACGGCACTAA AAGTCGCCGATAAAACCTATGAAAGCGTGATCTATGGGGACACTATGCCGCGCTTTACGTCGACGGCGGGCGTGAGTGCG ATTGAAGTGATGGCTAAGGACGCCTCTGACAAAGATATCTCCATCTATAAAGAAGATATCGATTTGAAAGTCGCTACAGA TCATTTCTTTGTATTGCATGGTGATTTTGCCGAACCTAAATTACTCAATATCAACTATTCCCGCACTGAACTCGATAAAC TCAATGAAGTGGCAGAAAACAGTAAAATGCAGCTTTTGATTGCGAATACTGCTGTGCATGCCCAAGCCTTTGATGCCTAT GTGTCTAAGTCGACACAAACCTTTGCCGATGCCGTGATGTTAGGCAGTGTGGCCTACGGTGAAGCGTCGCAGCCGCAAGT GATGGATACGGGGGAATATAAGGTTTACCTCGCTCCTGCGGGAACGACCAATGTGTCTTACACGACTGCGAACATTAAAT TCAGTGCTAAGGTGCCTTATAAGTTGATCATCCGTGAAGGTTTTGGCGCTTCGGATTCAAAAATCACCTTAGACAGCGTC GATTCAACCACCAATGTTCGTAACCATGTGGCGCTAGAAGCAAGTGTCGATTATCGCGTCTTTAACGGTTTAGGCTCGCA CATTATTGATGTGAAAGTGGCCAGCAGTAAGCAAGATACCCTGTTTAGCGAAGTGCCATCTTTTGGAGTGACTAGTTATC AAGGCGCCGAGTTTAATGATTTTGGTGTGAGCGTGTTCGATCACGGTACGCAAAATAAATTGCTCGATAACGTGCTGATC ACCCTTAATCAAGATGATATTAAAACCATCTTCATTTACGAGCAGGCGACTGAGCAAGGCAGCCAAGTGAAGGCGATGGA GATGAAGCAAACTCAGACTCCAAGCCCCTATAGCTTTAAGTTCGACATTGTGAGTTTTGCCGATAAAAGCAATCTCACTG TGTATTTCTTAAAAGCAAATGACACGATTGAAACTGCGGTAAATAAAATCACTGCGGTCAATCCAGCTAGCCCTCAGTCA GTGACTGTGCCTGCAGGCGAATATTCTATTAAAGTTATCGCAGTCGAAAACGGCACTAAAACCGTTGTCTATGCCTCCGA TTTAATGGATTTCAGCAATGAAGACAATGTCACTATGGTGCTGAATAAAGATCCTGCGACTAGCTTTGGTTATAACTTGA TTAAGATCTAA
Upstream 100 bases:
>100_bases TGTGAAATATTTGTTTTTGTTTTTAAGGTAAAAAGGCATTGTTGTCATTGGATATCTGGGTAGACTGAACTGAATTTTAT GTCAGTCAATGAGGGAAACA
Downstream 100 bases:
>100_bases CCGCTAAGGTGAGTAAACTTAGCTAATACAAGAGCGCTACTTAGGTAGCGCTTTTTTTGGGCTGTTTTTTAGGTGTTGGT TTTAGAGAGGCTTAATAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 456; Mature: 456
Protein sequence:
>456_residues MIKSKLKGFAAVTVACLAVTACGSDSNNEDGTDQNATYVQFYNASAGSTATALKVADKTYESVIYGDTMPRFTSTAGVSA IEVMAKDASDKDISIYKEDIDLKVATDHFFVLHGDFAEPKLLNINYSRTELDKLNEVAENSKMQLLIANTAVHAQAFDAY VSKSTQTFADAVMLGSVAYGEASQPQVMDTGEYKVYLAPAGTTNVSYTTANIKFSAKVPYKLIIREGFGASDSKITLDSV DSTTNVRNHVALEASVDYRVFNGLGSHIIDVKVASSKQDTLFSEVPSFGVTSYQGAEFNDFGVSVFDHGTQNKLLDNVLI TLNQDDIKTIFIYEQATEQGSQVKAMEMKQTQTPSPYSFKFDIVSFADKSNLTVYFLKANDTIETAVNKITAVNPASPQS VTVPAGEYSIKVIAVENGTKTVVYASDLMDFSNEDNVTMVLNKDPATSFGYNLIKI
Sequences:
>Translated_456_residues MIKSKLKGFAAVTVACLAVTACGSDSNNEDGTDQNATYVQFYNASAGSTATALKVADKTYESVIYGDTMPRFTSTAGVSA IEVMAKDASDKDISIYKEDIDLKVATDHFFVLHGDFAEPKLLNINYSRTELDKLNEVAENSKMQLLIANTAVHAQAFDAY VSKSTQTFADAVMLGSVAYGEASQPQVMDTGEYKVYLAPAGTTNVSYTTANIKFSAKVPYKLIIREGFGASDSKITLDSV DSTTNVRNHVALEASVDYRVFNGLGSHIIDVKVASSKQDTLFSEVPSFGVTSYQGAEFNDFGVSVFDHGTQNKLLDNVLI TLNQDDIKTIFIYEQATEQGSQVKAMEMKQTQTPSPYSFKFDIVSFADKSNLTVYFLKANDTIETAVNKITAVNPASPQS VTVPAGEYSIKVIAVENGTKTVVYASDLMDFSNEDNVTMVLNKDPATSFGYNLIKI >Mature_456_residues MIKSKLKGFAAVTVACLAVTACGSDSNNEDGTDQNATYVQFYNASAGSTATALKVADKTYESVIYGDTMPRFTSTAGVSA IEVMAKDASDKDISIYKEDIDLKVATDHFFVLHGDFAEPKLLNINYSRTELDKLNEVAENSKMQLLIANTAVHAQAFDAY VSKSTQTFADAVMLGSVAYGEASQPQVMDTGEYKVYLAPAGTTNVSYTTANIKFSAKVPYKLIIREGFGASDSKITLDSV DSTTNVRNHVALEASVDYRVFNGLGSHIIDVKVASSKQDTLFSEVPSFGVTSYQGAEFNDFGVSVFDHGTQNKLLDNVLI TLNQDDIKTIFIYEQATEQGSQVKAMEMKQTQTPSPYSFKFDIVSFADKSNLTVYFLKANDTIETAVNKITAVNPASPQS VTVPAGEYSIKVIAVENGTKTVVYASDLMDFSNEDNVTMVLNKDPATSFGYNLIKI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49453; Mature: 49453
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKSKLKGFAAVTVACLAVTACGSDSNNEDGTDQNATYVQFYNASAGSTATALKVADKTY CCCHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEHHHHH ESVIYGDTMPRFTSTAGVSAIEVMAKDASDKDISIYKEDIDLKVATDHFFVLHGDFAEPK HEEEECCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEECCEEEEECCEEEEEECCCCCCE LLNINYSRTELDKLNEVAENSKMQLLIANTAVHAQAFDAYVSKSTQTFADAVMLGSVAYG EEEEECCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHCCHHHHHHHHHCCCEECC EASQPQVMDTGEYKVYLAPAGTTNVSYTTANIKFSAKVPYKLIIREGFGASDSKITLDSV CCCCCCEEECCCEEEEEECCCCCCEEEEEEEEEEECCCCEEEEEECCCCCCCCEEEEECC DSTTNVRNHVALEASVDYRVFNGLGSHIIDVKVASSKQDTLFSEVPSFGVTSYQGAEFND CCCCCCCCEEEEEEECCEEECCCCCCEEEEEEEECCCCHHHHHHCCCCCCCCCCCCCCCC FGVSVFDHGTQNKLLDNVLITLNQDDIKTIFIYEQATEQGSQVKAMEMKQTQTPSPYSFK CCEEEECCCCHHHCCCEEEEEECCCCCEEEEEEECCCCCCCEEEEEEHHCCCCCCCCEEE FDIVSFADKSNLTVYFLKANDTIETAVNKITAVNPASPQSVTVPAGEYSIKVIAVENGTK EEEEEECCCCCCEEEEEECCCCHHHHHHHEEECCCCCCCEEEEECCCEEEEEEEEECCCE TVVYASDLMDFSNEDNVTMVLNKDPATSFGYNLIKI EEEEEHHHHCCCCCCCEEEEEECCCCCCCCEEEEEC >Mature Secondary Structure MIKSKLKGFAAVTVACLAVTACGSDSNNEDGTDQNATYVQFYNASAGSTATALKVADKTY CCCHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEHHHHH ESVIYGDTMPRFTSTAGVSAIEVMAKDASDKDISIYKEDIDLKVATDHFFVLHGDFAEPK HEEEECCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEECCEEEEECCEEEEEECCCCCCE LLNINYSRTELDKLNEVAENSKMQLLIANTAVHAQAFDAYVSKSTQTFADAVMLGSVAYG EEEEECCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHCCHHHHHHHHHCCCEECC EASQPQVMDTGEYKVYLAPAGTTNVSYTTANIKFSAKVPYKLIIREGFGASDSKITLDSV CCCCCCEEECCCEEEEEECCCCCCEEEEEEEEEEECCCCEEEEEECCCCCCCCEEEEECC DSTTNVRNHVALEASVDYRVFNGLGSHIIDVKVASSKQDTLFSEVPSFGVTSYQGAEFND CCCCCCCCEEEEEEECCEEECCCCCCEEEEEEEECCCCHHHHHHCCCCCCCCCCCCCCCC FGVSVFDHGTQNKLLDNVLITLNQDDIKTIFIYEQATEQGSQVKAMEMKQTQTPSPYSFK CCEEEECCCCHHHCCCEEEEEECCCCCEEEEEEECCCCCCCEEEEEEHHCCCCCCCCEEE FDIVSFADKSNLTVYFLKANDTIETAVNKITAVNPASPQSVTVPAGEYSIKVIAVENGTK EEEEEECCCCCCEEEEEECCCCHHHHHHHEEECCCCCCCEEEEECCCEEEEEEEEECCCE TVVYASDLMDFSNEDNVTMVLNKDPATSFGYNLIKI EEEEEHHHHCCCCCCCEEEEEECCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA