| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is pqqL [H]
Identifier: 160873770
GI number: 160873770
Start: 778883
End: 781690
Strand: Direct
Name: pqqL [H]
Synonym: Sbal195_0648
Alternate gene names: 160873770
Gene position: 778883-781690 (Clockwise)
Preceding gene: 160873769
Following gene: 160873772
Centisome position: 14.57
GC content: 50.18
Gene sequence:
>2808_bases ATGCGCCAGTGGTTACTGCTGGCATTATTAAGTGTGGCGTTGCCGCTACAGGCGAGCGAAGATCCGCTGTGGATGGGGAC GGCTGACTTGCCCATGAGTGGGCGAATCCAGACCGGTGAACTTGCCAATGGCATGCGCTATTTATTAGTGAGCAATAAGA CGCCAGAGCAGGCTGTCATAGTACGCATGCGGGTGGACGTGGGCTCAGTGGTGGAGTCTGATACCGAGCAGGGGTTAGTG CATTTTCTTGAACACATGGCCTTTAATGGCTCGACGGGTTTGGCTGCGGGGGAGATGATCCCGACATTGCAGCGTCTTGG TCTGAGTTTTGGCGCCGATACCAATGCAGTGACTGAGTTTCAGCAGACGGTTTATCAATTCAACTTGCCCAGTAATAGCC AAGATAAAGTCGATACCGCTTTGTTTTTAATGCGCGAAATTGGCAGTAATTTATTACTCGACCCGGCGCTTATCGAGCGT GAAAAAGCTGTGGTATTGGCTGAACTGCGTGAGCGTAGCGGTGCGGATCTGGAGAATTACCGCAATCAATTACAGTTTTT AATGCCAGATACACTGTTGTCAAAGCGCTTACCTGTGGGTGAGGCGAACAGCATCAAGAATGCTACTCGCGAGACGCTGC TGTCTTTATACCAAGGTTTTTACACGCCCTCACGCACCACCTTAATTGTGGTGGGTGATATCGAGGTAGCCGCAGTTGAG CAAAAGATAAAACAACAGTTTGCCAGTTGGCAGGCCGCGCCTTTGGCGGCGAAGGTTAAGCCGCAAGCGCTAGGCATTGT CGAAGAGCGTCAAAGCGTCGATGCGGCGGCATTTTTCGATCCTAGCCTATCGACCTCGGTTTCACTCGGTATGCTCAAGC CTATGGCATACCCTGCCGACAGCCCTGCCGTGCGAGAGCAGGAAATACTGCTTGAACTCGCCCACGGCATCTTGTATCGC AGAATGGAGTCACAGTTACTGCATAGCCAAGGTTTATCTGGCGTTAGCCTGCAGGTTGGGGATCAATTTGATATCGCCTA TGGCACTCAAATGAGCTTAGGTACGCAGGAGAATAACTGGCAAGAGGGCATAGCAATATTGGAGCAAACCCTGCGCCAAG CACAAGAGTTTGGTTTTAGTCAGCAGGAAATTGACCAACAAATCAAACGTATGCACAAAGGGTATCAGCTCAGCGCAGCG GGTAGCACTACTATCCACAGTGTGAATATTGCCGAGGGGTTAGTGTATTCGGTCGCGGAAAATCGCGTGCCTGTAGAGCC TGAGTGGCAGCTGGCATTTTTTGAAAAAATACTGCCGACAGTGACGCCGCAAAAGCTAAAGCAAGTGTTTAATCAGACAT GGAACGCCACGCCGTATCTGTATCTGACGAGCAATAAGCCCATTGAAAATGCTGAAAAACAGCTTATCGCTAGCTATGAG AAAAGCCGCAAACAAGCTGTGAGTGCGCCAGCAACTAAGGCGATTGACGAGTTTGCATACACTCAATTTGGCGATCAAGG CAAGTTAGTGGCCGATAGTCGCGATGCCGAAACGGGCATTCGCCAGCTACAGTTTGCCAATGGCGTACGCCTTAATCTTA AGCCTACTGACTTTAATAAAGGCACCACATTGGTCAGCCTCAACATAGGCTTTGGTGAAGTGCCATTCCCTGAGTTAGAT GGCTTATCTTATCTGTTTAACAGTGCGTTTGTGCAGGGTGGACTCAAGGCCCATGATTATGAAAGCCTGCAGGAGATTTT TGCTGGGCAAGATATTTCCATCAACCTAGGCGTGCGTGAGCAGAGTTTTGGCGGTGAGATCAGTACCAATGCTGCAGAAC TGCGCACGCAGCTCGGTTTAATGACGGCCTTTTTGATTGAACCCGGCATGAATAAGCAGGCTGAGCAATTGTTCCGCGAG CAAGTGATTGCCGAGCAGCAAAGTCTCCATAGCAACCCGCAAACTGAGTTTTCTAATCAGTTTGACCGTATCTCCCACAG TGGTGATAAACGTTATGGTTATGGTGAACCGGAAGAAATTTTAAAACGTCAGTTTGCAGAGCTGGCGCCGAGTTTCCATT CAGCCGTCGAGCAAGGGGCAATTGAAATCGCCATAGTGGGTGATTTTGACGAAGCCAGCGCCATCGCTGCAGTGGCTGAA ACTCTCGGGGCAATCAAACGCAGCCCCATTAAAAATAGCCAGTCGCTAGTGCCTGTGTTCCCGAAAGTGCCTGCTAAGAT GACGTTAACACACTATGGTAATCCAGATTCAGCGGCGCTGGCCATGGTGTGGCCAACAACGGATATGACTCACCTAAGCC AACACGCTGGACTGGGATTGTTGGAGCAAGTGCTCAGCATCCTATTAACGGAGAACGTGAGAGAAAAAGCGGGCGCGAGT TATTCGCCCTCGGCCTTTTCTTACAATGATCTCAATGCCAGCGGTTATGGTTATCTCGGTCTATTTAGCGCGACGACTCA AGCCATGTTGCCAACGGTTTCCGAGTATTTCACCGCTGCAGTTAACCAAGTGAAGCAGCCGCAGGGGATTAGCGAGGACT TACTTAACCGAGCCCGCCAACCAGTGCTTGAATGGATGCAAGCCGCGCCGCAGAGCAATGGTTTTTGGTTAGATTTGGCA TCAAATGCCCAGAGTTATCCTGGACGCTTTGCTGCTTTCAAACAAAGGCAAGTGTTGGCACAGAAGATGACACCGGCTGA GCTCAGTAAATTGGCACAGCAATATTTGCCAGCTGATGGCAGTTTAACCATCCAAGTCCTTCCTGCACCACTTGAACCCC AGCAATGA
Upstream 100 bases:
>100_bases TTATTTTATCTGAAACTTAGGTGTGCGCTTCCTAGGTTTCTTATTTGATTTTGGGGGAAAAGTGCGAATTTTAATGAACA ATTTCAAGGTGATTAGTTTG
Downstream 100 bases:
>100_bases GTGTTGGTGCATAGAATAGAAGATTGATCATTCACCGCCATATCCCCTGTGCTAGCCAGTGCAGGGGATATTTTGTTCTA CCTCCAACGTTCCGTCTTGG
Product: peptidase M16 domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 935; Mature: 935
Protein sequence:
>935_residues MRQWLLLALLSVALPLQASEDPLWMGTADLPMSGRIQTGELANGMRYLLVSNKTPEQAVIVRMRVDVGSVVESDTEQGLV HFLEHMAFNGSTGLAAGEMIPTLQRLGLSFGADTNAVTEFQQTVYQFNLPSNSQDKVDTALFLMREIGSNLLLDPALIER EKAVVLAELRERSGADLENYRNQLQFLMPDTLLSKRLPVGEANSIKNATRETLLSLYQGFYTPSRTTLIVVGDIEVAAVE QKIKQQFASWQAAPLAAKVKPQALGIVEERQSVDAAAFFDPSLSTSVSLGMLKPMAYPADSPAVREQEILLELAHGILYR RMESQLLHSQGLSGVSLQVGDQFDIAYGTQMSLGTQENNWQEGIAILEQTLRQAQEFGFSQQEIDQQIKRMHKGYQLSAA GSTTIHSVNIAEGLVYSVAENRVPVEPEWQLAFFEKILPTVTPQKLKQVFNQTWNATPYLYLTSNKPIENAEKQLIASYE KSRKQAVSAPATKAIDEFAYTQFGDQGKLVADSRDAETGIRQLQFANGVRLNLKPTDFNKGTTLVSLNIGFGEVPFPELD GLSYLFNSAFVQGGLKAHDYESLQEIFAGQDISINLGVREQSFGGEISTNAAELRTQLGLMTAFLIEPGMNKQAEQLFRE QVIAEQQSLHSNPQTEFSNQFDRISHSGDKRYGYGEPEEILKRQFAELAPSFHSAVEQGAIEIAIVGDFDEASAIAAVAE TLGAIKRSPIKNSQSLVPVFPKVPAKMTLTHYGNPDSAALAMVWPTTDMTHLSQHAGLGLLEQVLSILLTENVREKAGAS YSPSAFSYNDLNASGYGYLGLFSATTQAMLPTVSEYFTAAVNQVKQPQGISEDLLNRARQPVLEWMQAAPQSNGFWLDLA SNAQSYPGRFAAFKQRQVLAQKMTPAELSKLAQQYLPADGSLTIQVLPAPLEPQQ
Sequences:
>Translated_935_residues MRQWLLLALLSVALPLQASEDPLWMGTADLPMSGRIQTGELANGMRYLLVSNKTPEQAVIVRMRVDVGSVVESDTEQGLV HFLEHMAFNGSTGLAAGEMIPTLQRLGLSFGADTNAVTEFQQTVYQFNLPSNSQDKVDTALFLMREIGSNLLLDPALIER EKAVVLAELRERSGADLENYRNQLQFLMPDTLLSKRLPVGEANSIKNATRETLLSLYQGFYTPSRTTLIVVGDIEVAAVE QKIKQQFASWQAAPLAAKVKPQALGIVEERQSVDAAAFFDPSLSTSVSLGMLKPMAYPADSPAVREQEILLELAHGILYR RMESQLLHSQGLSGVSLQVGDQFDIAYGTQMSLGTQENNWQEGIAILEQTLRQAQEFGFSQQEIDQQIKRMHKGYQLSAA GSTTIHSVNIAEGLVYSVAENRVPVEPEWQLAFFEKILPTVTPQKLKQVFNQTWNATPYLYLTSNKPIENAEKQLIASYE KSRKQAVSAPATKAIDEFAYTQFGDQGKLVADSRDAETGIRQLQFANGVRLNLKPTDFNKGTTLVSLNIGFGEVPFPELD GLSYLFNSAFVQGGLKAHDYESLQEIFAGQDISINLGVREQSFGGEISTNAAELRTQLGLMTAFLIEPGMNKQAEQLFRE QVIAEQQSLHSNPQTEFSNQFDRISHSGDKRYGYGEPEEILKRQFAELAPSFHSAVEQGAIEIAIVGDFDEASAIAAVAE TLGAIKRSPIKNSQSLVPVFPKVPAKMTLTHYGNPDSAALAMVWPTTDMTHLSQHAGLGLLEQVLSILLTENVREKAGAS YSPSAFSYNDLNASGYGYLGLFSATTQAMLPTVSEYFTAAVNQVKQPQGISEDLLNRARQPVLEWMQAAPQSNGFWLDLA SNAQSYPGRFAAFKQRQVLAQKMTPAELSKLAQQYLPADGSLTIQVLPAPLEPQQ >Mature_935_residues MRQWLLLALLSVALPLQASEDPLWMGTADLPMSGRIQTGELANGMRYLLVSNKTPEQAVIVRMRVDVGSVVESDTEQGLV HFLEHMAFNGSTGLAAGEMIPTLQRLGLSFGADTNAVTEFQQTVYQFNLPSNSQDKVDTALFLMREIGSNLLLDPALIER EKAVVLAELRERSGADLENYRNQLQFLMPDTLLSKRLPVGEANSIKNATRETLLSLYQGFYTPSRTTLIVVGDIEVAAVE QKIKQQFASWQAAPLAAKVKPQALGIVEERQSVDAAAFFDPSLSTSVSLGMLKPMAYPADSPAVREQEILLELAHGILYR RMESQLLHSQGLSGVSLQVGDQFDIAYGTQMSLGTQENNWQEGIAILEQTLRQAQEFGFSQQEIDQQIKRMHKGYQLSAA GSTTIHSVNIAEGLVYSVAENRVPVEPEWQLAFFEKILPTVTPQKLKQVFNQTWNATPYLYLTSNKPIENAEKQLIASYE KSRKQAVSAPATKAIDEFAYTQFGDQGKLVADSRDAETGIRQLQFANGVRLNLKPTDFNKGTTLVSLNIGFGEVPFPELD GLSYLFNSAFVQGGLKAHDYESLQEIFAGQDISINLGVREQSFGGEISTNAAELRTQLGLMTAFLIEPGMNKQAEQLFRE QVIAEQQSLHSNPQTEFSNQFDRISHSGDKRYGYGEPEEILKRQFAELAPSFHSAVEQGAIEIAIVGDFDEASAIAAVAE TLGAIKRSPIKNSQSLVPVFPKVPAKMTLTHYGNPDSAALAMVWPTTDMTHLSQHAGLGLLEQVLSILLTENVREKAGAS YSPSAFSYNDLNASGYGYLGLFSATTQAMLPTVSEYFTAAVNQVKQPQGISEDLLNRARQPVLEWMQAAPQSNGFWLDLA SNAQSYPGRFAAFKQRQVLAQKMTPAELSKLAQQYLPADGSLTIQVLPAPLEPQQ
Specific function: Unknown
COG id: COG0612
COG function: function code R; Predicted Zn-dependent peptidases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M16 family [H]
Homologues:
Organism=Escherichia coli, GI1787770, Length=932, Percent_Identity=22.4248927038627, Blast_Score=158, Evalue=1e-39, Organism=Drosophila melanogaster, GI21357875, Length=230, Percent_Identity=26.5217391304348, Blast_Score=67, Evalue=8e-11, Organism=Drosophila melanogaster, GI24646943, Length=230, Percent_Identity=26.5217391304348, Blast_Score=67, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011249 - InterPro: IPR011237 - InterPro: IPR011765 - InterPro: IPR001431 - InterPro: IPR007863 [H]
Pfam domain/function: PF00675 Peptidase_M16; PF05193 Peptidase_M16_C [H]
EC number: 3.4.99.- [C]
Molecular weight: Translated: 102819; Mature: 102819
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQWLLLALLSVALPLQASEDPLWMGTADLPMSGRIQTGELANGMRYLLVSNKTPEQAVI CCHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCHHHCCEEEEEEECCCCCCEEE VRMRVDVGSVVESDTEQGLVHFLEHMAFNGSTGLAAGEMIPTLQRLGLSFGADTNAVTEF EEEECCHHHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHH QQTVYQFNLPSNSQDKVDTALFLMREIGSNLLLDPALIEREKAVVLAELRERSGADLENY HHHHHEECCCCCCCHHHHHHHHHHHHHCCCCEECHHHHHHHHHHHHHHHHHHCCCCHHHH RNQLQFLMPDTLLSKRLPVGEANSIKNATRETLLSLYQGFYTPSRTTLIVVGDIEVAAVE HHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHH QKIKQQFASWQAAPLAAKVKPQALGIVEERQSVDAAAFFDPSLSTSVSLGMLKPMAYPAD HHHHHHHHCCCCCCCHHCCCHHHHHHHHHHHCCCHHEEECCCCCCCCHHHHHCCCCCCCC SPAVREQEILLELAHGILYRRMESQLLHSQGLSGVSLQVGDQFDIAYGTQMSLGTQENNW CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCEEEEECCEEECCCCCCCH QEGIAILEQTLRQAQEFGFSQQEIDQQIKRMHKGYQLSAAGSTTIHSVNIAEGLVYSVAE HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCEEEECCCCCEEEEEEHHHHHHHHHHC NRVPVEPEWQLAFFEKILPTVTPQKLKQVFNQTWNATPYLYLTSNKPIENAEKQLIASYE CCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHH KSRKQAVSAPATKAIDEFAYTQFGDQGKLVADSRDAETGIRQLQFANGVRLNLKPTDFNK HHHHHHHCCCHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHCCCEEEEEECCCCCC GTTLVSLNIGFGEVPFPELDGLSYLFNSAFVQGGLKAHDYESLQEIFAGQDISINLGVRE CCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCEEEEECCCC QSFGGEISTNAAELRTQLGLMTAFLIEPGMNKQAEQLFREQVIAEQQSLHSNPQTEFSNQ CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHH FDRISHSGDKRYGYGEPEEILKRQFAELAPSFHSAVEQGAIEIAIVGDFDEASAIAAVAE HHHHHCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHCCCEEEEEEECCCHHHHHHHHHH TLGAIKRSPIKNSQSLVPVFPKVPAKMTLTHYGNPDSAALAMVWPTTDMTHLSQHAGLGL HHHHHHCCCCCCCCCCEECCCCCCCEEEEEECCCCCCCEEEEEECCCCHHHHHHHCCHHH LEQVLSILLTENVREKAGASYSPSAFSYNDLNASGYGYLGLFSATTQAMLPTVSEYFTAA HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHH VNQVKQPQGISEDLLNRARQPVLEWMQAAPQSNGFWLDLASNAQSYPGRFAAFKQRQVLA HHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHH QKMTPAELSKLAQQYLPADGSLTIQVLPAPLEPQQ HHCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCC >Mature Secondary Structure MRQWLLLALLSVALPLQASEDPLWMGTADLPMSGRIQTGELANGMRYLLVSNKTPEQAVI CCHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCHHHCCEEEEEEECCCCCCEEE VRMRVDVGSVVESDTEQGLVHFLEHMAFNGSTGLAAGEMIPTLQRLGLSFGADTNAVTEF EEEECCHHHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHH QQTVYQFNLPSNSQDKVDTALFLMREIGSNLLLDPALIEREKAVVLAELRERSGADLENY HHHHHEECCCCCCCHHHHHHHHHHHHHCCCCEECHHHHHHHHHHHHHHHHHHCCCCHHHH RNQLQFLMPDTLLSKRLPVGEANSIKNATRETLLSLYQGFYTPSRTTLIVVGDIEVAAVE HHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHH QKIKQQFASWQAAPLAAKVKPQALGIVEERQSVDAAAFFDPSLSTSVSLGMLKPMAYPAD HHHHHHHHCCCCCCCHHCCCHHHHHHHHHHHCCCHHEEECCCCCCCCHHHHHCCCCCCCC SPAVREQEILLELAHGILYRRMESQLLHSQGLSGVSLQVGDQFDIAYGTQMSLGTQENNW CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCEEEEECCEEECCCCCCCH QEGIAILEQTLRQAQEFGFSQQEIDQQIKRMHKGYQLSAAGSTTIHSVNIAEGLVYSVAE HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCEEEECCCCCEEEEEEHHHHHHHHHHC NRVPVEPEWQLAFFEKILPTVTPQKLKQVFNQTWNATPYLYLTSNKPIENAEKQLIASYE CCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHH KSRKQAVSAPATKAIDEFAYTQFGDQGKLVADSRDAETGIRQLQFANGVRLNLKPTDFNK HHHHHHHCCCHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHCCCEEEEEECCCCCC GTTLVSLNIGFGEVPFPELDGLSYLFNSAFVQGGLKAHDYESLQEIFAGQDISINLGVRE CCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCEEEEECCCC QSFGGEISTNAAELRTQLGLMTAFLIEPGMNKQAEQLFREQVIAEQQSLHSNPQTEFSNQ CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHH FDRISHSGDKRYGYGEPEEILKRQFAELAPSFHSAVEQGAIEIAIVGDFDEASAIAAVAE HHHHHCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHCCCEEEEEEECCCHHHHHHHHHH TLGAIKRSPIKNSQSLVPVFPKVPAKMTLTHYGNPDSAALAMVWPTTDMTHLSQHAGLGL HHHHHHCCCCCCCCCCEECCCCCCCEEEEEECCCCCCCEEEEEECCCCHHHHHHHCCHHH LEQVLSILLTENVREKAGASYSPSAFSYNDLNASGYGYLGLFSATTQAMLPTVSEYFTAA HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHH VNQVKQPQGISEDLLNRARQPVLEWMQAAPQSNGFWLDLASNAQSYPGRFAAFKQRQVLA HHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHH QKMTPAELSKLAQQYLPADGSLTIQVLPAPLEPQQ HHCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Zn [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Endopeptidases of unknown catalytic mechanism [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503 [H]