| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160873739
Identifier: 160873739
GI number: 160873739
Start: 736954
End: 739800
Strand: Direct
Name: 160873739
Synonym: Sbal195_0617
Alternate gene names: NA
Gene position: 736954-739800 (Clockwise)
Preceding gene: 160873738
Following gene: 160873740
Centisome position: 13.78
GC content: 32.63
Gene sequence:
>2847_bases ATGAATTTTATTATACACCTATTAACGTTATTTTTTGTTTTTTTTTCATCACACTCTTCGGCAAAAAATGAAGAGCAATC TTCATATCCGATTGAGTTCTCTGATTTCTATATAAAACAAACAGGAAAAGTTAGACTTGTTGTTGCTGGTGAAATTAAAG ATATTGAAGTAGTTGGTACTTTTAATTATGATGGTATTAATGTTTCCGCCGATGATGTAAACCAAAAAACGATAAGAAAT TATTTGGTAAACTATATCAATGATAAAGAAGTTGATATAGTCATCAGAGAACTCATTGATGGCATTAATGCTAACCCAGG CTGTGAAAATATCATTAGTGATTGCGTACCGAATGTTTTGCCTAATGAAGTAAGTTATTCTTTTGATTTTGATAACAATA CATTAAAGATATTTGCTGGCACATCATTGATTACTAAGCAGAATAATAAAGAGTATTTGCCGTCTTTAAGGAGTGGTAAT GGGCTTGTCAATAACTCAACCTTGTATACTCAGTTTAGTAATGAAGCGTCCACTAGTTTCAATTTTTCAAATAAAACCAC TATCGGTTTGCCGGTTGGGTTTGTAGAGTTAGACACCCAAGCTAGAAATGCAGGTGATAATTTTGATGTGTATAGTGCTG TTTTTGATACAGAATTTGGTGACAAGAGGATAGTGTTCGGCTACCTCAACAATACAGGAAGAAGCTTTAATACAACGGAT ATTTTGAATAATAACGCTGATTACTCAGCTTTTAATTTACAATTTGGGTCTAGCCAAAATCTACTTAAAGGTGGCGCAAA AGGTTCTCAACAATTGTCATTTATAGCTCCGCAAGATGGACAGATAGAACTCTATCTAGGTAATAGGTTATTGCTATCGA AGTCTGTATCATCAGGTAGACAAAGCATATCTTACTCAGAGTTACCTCAAGGCGCGTACACCGTAAATTTAAAACTCATA TCAGCAGGAACAGTACTTATTGACGATATGATTCAAGTGGTCAATAATAATAATTTTATATTAGCTTCTGGTGATGTTGA TTACGCATTCAATGCCGGTGTGTTTGACACCAAAAAATTTAGACATACGACGCATGATTATTTTAACGATGTGCATACAA CAGAAAATGATTTTAAAAGAGGTTATCTTCAGGCTAAATCTTCATGGAGATTAGCTGAGCCTGTTATATTATATAGTGGA ATAACAACAAATGTTGATGAGCATTATTCTCAAATCGGTGCAAGGTACATATATGAAGATTTATTTTCAGCAGATTACTT CTTAGGGTATTTTTCTACTGGTGACATATATCAATCAGCTAACATTAAATTTGGCCGATTATCGTTATCAGCTAAGGCGT TTGATTTAGATTACAACACTAGGAATTTTACACTTTCAAATCAATTATATGGTACGAATCCATATAAAAACTTTTCTATA AGTTATTCTAAACCTTTCTTTGGTGGCAATGGTTATTTAAATTACAATAATTACAGTAGTAAAAATTATTATGGAATAAA CAACGATAATAGTATTGTTATCGAGAAGCCAATTGATTATATCTATAATATTAATGCTTTAAATAATGTTTTAAATAATG CTTTAAACAATGGCTCATATAGTACAATAAGTAATGAGAACTATAATATAGGTTGGTCTACTAATATTTATAGCGGCACA TTAACGCTCAACAGTAACTACAATTCTAATAGTGCTTACGATGAGGTTAAATTCGGCATTTATTGGAGTCAACGTTTTGG TAAAAGTGTAGCCGGAGGTTTGTCTGTAATGACTAACAATAAAGGTTCTTCCCAATATAATAATTCATTGAGTTTAAATG CAAGTAATGATAATTGGTACGCCAATCATACAGTGATGGCCAGTTTACTTAATGACGATAATGATGATAATTTTGAGAGT TCTCTTTCCGGGACTTATTATTGGCAGAACGACAAGGCTACTGTTAATGCTTACAATTATGTAAACAGTAAAGGGTTACT TATTTCTTCAGGCACTTTGCAAAGCACTCAAGTAGTGTCAGCAGATTCGATATCTTTAACAAAGAGTAATGGTAATGCAT TTGCAAGCATAAACTTAGAATCTGACATTCCAATATCGAAAATACGTTACAATTTATATTCTGATAAGTACTCCAAAAGT GGCTATATTTCGGGTTCCGAAAATACGATATTAGATATAAATCCTTATGATCAGGTTTTGTTTTCGCTGGATGATGTAAA TAATGTTGAAATATTATCCCCAACTGAAAGCAAATTTGTTTATCCAGGTACGGTTATTAGTATAGACAACGTGATTAAAA GCCTTGATAGTCAGGTTTTTATTGTCAGCGATATTCTTGGTAAGCCAGTAAGTCAAATTCGATGTTCAGGGAATGGCTGT CGCGGTGTTGAACCTCTATCTAATGATGGCGTGTTTAGAGTTAAATTTCAAAAAGGGAGTACTTTCACATTAACATCTGA AAGACGTCAATGTGTTTTTGATAAAGATGAACCCAAAAAATATATTAATGCTGTTTGTTTGCAGGGCTTATATCATGCTG ATGACAATGAAATTACTCAAGCAGATGAAACAGAAGGCACTTTAGGTGACATTGAGGGCTTTGCTTATATCGGTTACACG TTAAATATGAATACTGTAGATGCTCTCGAAAAAGTTGGTTTACCTTTTAAAAGTATATTTGTAGGTAAAACACAATATAT TTATGTAAGGCATTCTAACTCATACAGCTCTGTTCAACTAGATGTTTTAGAGTCTATTGGTGCAAAGTTGATACCAAACA ATATCGATATTCAAACCTTATTTACAGGGTATTTCTATCATGAATAA
Upstream 100 bases:
>100_bases ATAAAGTAAGCTTTAACCTGTCCCAGGATATAGCGCCAACCACCGCTGCTGTTCGTTGTAACGGCTTGTTTTTTATGACC GGCACTAATGAATTTTAAAA
Downstream 100 bases:
>100_bases TATTTTCACCAGAATTTATGCATTACTGTTAATTCTATTTTTCCATGATGCAAATTCAATTGGAATTAGTTCAACAATGG AATTTGCTAATGAATCAGGA
Product: P pilus assembly protein porin PapC-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 948; Mature: 948
Protein sequence:
>948_residues MNFIIHLLTLFFVFFSSHSSAKNEEQSSYPIEFSDFYIKQTGKVRLVVAGEIKDIEVVGTFNYDGINVSADDVNQKTIRN YLVNYINDKEVDIVIRELIDGINANPGCENIISDCVPNVLPNEVSYSFDFDNNTLKIFAGTSLITKQNNKEYLPSLRSGN GLVNNSTLYTQFSNEASTSFNFSNKTTIGLPVGFVELDTQARNAGDNFDVYSAVFDTEFGDKRIVFGYLNNTGRSFNTTD ILNNNADYSAFNLQFGSSQNLLKGGAKGSQQLSFIAPQDGQIELYLGNRLLLSKSVSSGRQSISYSELPQGAYTVNLKLI SAGTVLIDDMIQVVNNNNFILASGDVDYAFNAGVFDTKKFRHTTHDYFNDVHTTENDFKRGYLQAKSSWRLAEPVILYSG ITTNVDEHYSQIGARYIYEDLFSADYFLGYFSTGDIYQSANIKFGRLSLSAKAFDLDYNTRNFTLSNQLYGTNPYKNFSI SYSKPFFGGNGYLNYNNYSSKNYYGINNDNSIVIEKPIDYIYNINALNNVLNNALNNGSYSTISNENYNIGWSTNIYSGT LTLNSNYNSNSAYDEVKFGIYWSQRFGKSVAGGLSVMTNNKGSSQYNNSLSLNASNDNWYANHTVMASLLNDDNDDNFES SLSGTYYWQNDKATVNAYNYVNSKGLLISSGTLQSTQVVSADSISLTKSNGNAFASINLESDIPISKIRYNLYSDKYSKS GYISGSENTILDINPYDQVLFSLDDVNNVEILSPTESKFVYPGTVISIDNVIKSLDSQVFIVSDILGKPVSQIRCSGNGC RGVEPLSNDGVFRVKFQKGSTFTLTSERRQCVFDKDEPKKYINAVCLQGLYHADDNEITQADETEGTLGDIEGFAYIGYT LNMNTVDALEKVGLPFKSIFVGKTQYIYVRHSNSYSSVQLDVLESIGAKLIPNNIDIQTLFTGYFYHE
Sequences:
>Translated_948_residues MNFIIHLLTLFFVFFSSHSSAKNEEQSSYPIEFSDFYIKQTGKVRLVVAGEIKDIEVVGTFNYDGINVSADDVNQKTIRN YLVNYINDKEVDIVIRELIDGINANPGCENIISDCVPNVLPNEVSYSFDFDNNTLKIFAGTSLITKQNNKEYLPSLRSGN GLVNNSTLYTQFSNEASTSFNFSNKTTIGLPVGFVELDTQARNAGDNFDVYSAVFDTEFGDKRIVFGYLNNTGRSFNTTD ILNNNADYSAFNLQFGSSQNLLKGGAKGSQQLSFIAPQDGQIELYLGNRLLLSKSVSSGRQSISYSELPQGAYTVNLKLI SAGTVLIDDMIQVVNNNNFILASGDVDYAFNAGVFDTKKFRHTTHDYFNDVHTTENDFKRGYLQAKSSWRLAEPVILYSG ITTNVDEHYSQIGARYIYEDLFSADYFLGYFSTGDIYQSANIKFGRLSLSAKAFDLDYNTRNFTLSNQLYGTNPYKNFSI SYSKPFFGGNGYLNYNNYSSKNYYGINNDNSIVIEKPIDYIYNINALNNVLNNALNNGSYSTISNENYNIGWSTNIYSGT LTLNSNYNSNSAYDEVKFGIYWSQRFGKSVAGGLSVMTNNKGSSQYNNSLSLNASNDNWYANHTVMASLLNDDNDDNFES SLSGTYYWQNDKATVNAYNYVNSKGLLISSGTLQSTQVVSADSISLTKSNGNAFASINLESDIPISKIRYNLYSDKYSKS GYISGSENTILDINPYDQVLFSLDDVNNVEILSPTESKFVYPGTVISIDNVIKSLDSQVFIVSDILGKPVSQIRCSGNGC RGVEPLSNDGVFRVKFQKGSTFTLTSERRQCVFDKDEPKKYINAVCLQGLYHADDNEITQADETEGTLGDIEGFAYIGYT LNMNTVDALEKVGLPFKSIFVGKTQYIYVRHSNSYSSVQLDVLESIGAKLIPNNIDIQTLFTGYFYHE >Mature_948_residues MNFIIHLLTLFFVFFSSHSSAKNEEQSSYPIEFSDFYIKQTGKVRLVVAGEIKDIEVVGTFNYDGINVSADDVNQKTIRN YLVNYINDKEVDIVIRELIDGINANPGCENIISDCVPNVLPNEVSYSFDFDNNTLKIFAGTSLITKQNNKEYLPSLRSGN GLVNNSTLYTQFSNEASTSFNFSNKTTIGLPVGFVELDTQARNAGDNFDVYSAVFDTEFGDKRIVFGYLNNTGRSFNTTD ILNNNADYSAFNLQFGSSQNLLKGGAKGSQQLSFIAPQDGQIELYLGNRLLLSKSVSSGRQSISYSELPQGAYTVNLKLI SAGTVLIDDMIQVVNNNNFILASGDVDYAFNAGVFDTKKFRHTTHDYFNDVHTTENDFKRGYLQAKSSWRLAEPVILYSG ITTNVDEHYSQIGARYIYEDLFSADYFLGYFSTGDIYQSANIKFGRLSLSAKAFDLDYNTRNFTLSNQLYGTNPYKNFSI SYSKPFFGGNGYLNYNNYSSKNYYGINNDNSIVIEKPIDYIYNINALNNVLNNALNNGSYSTISNENYNIGWSTNIYSGT LTLNSNYNSNSAYDEVKFGIYWSQRFGKSVAGGLSVMTNNKGSSQYNNSLSLNASNDNWYANHTVMASLLNDDNDDNFES SLSGTYYWQNDKATVNAYNYVNSKGLLISSGTLQSTQVVSADSISLTKSNGNAFASINLESDIPISKIRYNLYSDKYSKS GYISGSENTILDINPYDQVLFSLDDVNNVEILSPTESKFVYPGTVISIDNVIKSLDSQVFIVSDILGKPVSQIRCSGNGC RGVEPLSNDGVFRVKFQKGSTFTLTSERRQCVFDKDEPKKYINAVCLQGLYHADDNEITQADETEGTLGDIEGFAYIGYT LNMNTVDALEKVGLPFKSIFVGKTQYIYVRHSNSYSSVQLDVLESIGAKLIPNNIDIQTLFTGYFYHE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 105718; Mature: 105718
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFIIHLLTLFFVFFSSHSSAKNEEQSSYPIEFSDFYIKQTGKVRLVVAGEIKDIEVVGT CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEECCCEEEEEECCCCEEEEEEE FNYDGINVSADDVNQKTIRNYLVNYINDKEVDIVIRELIDGINANPGCENIISDCVPNVL ECCCCEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCC PNEVSYSFDFDNNTLKIFAGTSLITKQNNKEYLPSLRSGNGLVNNSTLYTQFSNEASTSF CCCCEEEEECCCCEEEEEECCEEEEECCCHHHCCCCCCCCCEEECCEEEEEECCCCCCEE NFSNKTTIGLPVGFVELDTQARNAGDNFDVYSAVFDTEFGDKRIVFGYLNNTGRSFNTTD CCCCCEEEEEEEEEEEECCHHCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCCCE ILNNNADYSAFNLQFGSSQNLLKGGAKGSQQLSFIAPQDGQIELYLGNRLLLSKSVSSGR EECCCCCCEEEEEEECCCCCHHHCCCCCCCEEEEECCCCCEEEEEECCEEEEECCHHHHH QSISYSELPQGAYTVNLKLISAGTVLIDDMIQVVNNNNFILASGDVDYAFNAGVFDTKKF HCCCHHHCCCCEEEEEEEEEECCHHHHHHHHHHHCCCCEEEEECCCCEEECCCCCCCHHH RHTTHDYFNDVHTTENDFKRGYLQAKSSWRLAEPVILYSGITTNVDEHYSQIGARYIYED HCCHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHH LFSADYFLGYFSTGDIYQSANIKFGRLSLSAKAFDLDYNTRNFTLSNQLYGTNPYKNFSI HHCCCEEEEEECCCCEEECCCEEEEEEEEEEEEEEECCCCCEEEEECCEECCCCCCCEEE SYSKPFFGGNGYLNYNNYSSKNYYGINNDNSIVIEKPIDYIYNINALNNVLNNALNNGSY EECCCEECCCCEEECCCCCCCCEEEECCCCEEEEECCCCCEEECHHHHHHHHHHCCCCCE STISNENYNIGWSTNIYSGTLTLNSNYNSNSAYDEVKFGIYWSQRFGKSVAGGLSVMTNN EEECCCCEEECEECCEEEEEEEECCCCCCCCCCCEEEEEEEEHHHHCCHHHCCEEEEECC KGSSQYNNSLSLNASNDNWYANHTVMASLLNDDNDDNFESSLSGTYYWQNDKATVNAYNY CCCCCCCCEEEEECCCCCEEECHHEEEEECCCCCCCCCHHCCCCEEEEECCCEEEEEEEE VNSKGLLISSGTLQSTQVVSADSISLTKSNGNAFASINLESDIPISKIRYNLYSDKYSKS ECCCCEEEECCCCCCEEEEECCCEEEEECCCCEEEEEEECCCCCHHHEEEEECCCCCCCC GYISGSENTILDINPYDQVLFSLDDVNNVEILSPTESKFVYPGTVISIDNVIKSLDSQVF CEECCCCCEEEEECCHHHHHEEECCCCCEEEECCCCCCEECCCEEEEHHHHHHHCCCCEE IVSDILGKPVSQIRCSGNGCRGVEPLSNDGVFRVKFQKGSTFTLTSERRQCVFDKDEPKK EEEHHHCCCCHHEEECCCCCCCCCCCCCCCEEEEEEECCCEEEEECCCCCCCCCCCCHHH YINAVCLQGLYHADDNEITQADETEGTLGDIEGFAYIGYTLNMNTVDALEKVGLPFKSIF HHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCHHHHHHHHCCCHHHEE VGKTQYIYVRHSNSYSSVQLDVLESIGAKLIPNNIDIQTLFTGYFYHE ECCEEEEEEEECCCCCEEEEEHHHHCCCEECCCCCEEEEEEEEEEECC >Mature Secondary Structure MNFIIHLLTLFFVFFSSHSSAKNEEQSSYPIEFSDFYIKQTGKVRLVVAGEIKDIEVVGT CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEECCCEEEEEECCCCEEEEEEE FNYDGINVSADDVNQKTIRNYLVNYINDKEVDIVIRELIDGINANPGCENIISDCVPNVL ECCCCEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCC PNEVSYSFDFDNNTLKIFAGTSLITKQNNKEYLPSLRSGNGLVNNSTLYTQFSNEASTSF CCCCEEEEECCCCEEEEEECCEEEEECCCHHHCCCCCCCCCEEECCEEEEEECCCCCCEE NFSNKTTIGLPVGFVELDTQARNAGDNFDVYSAVFDTEFGDKRIVFGYLNNTGRSFNTTD CCCCCEEEEEEEEEEEECCHHCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCCCE ILNNNADYSAFNLQFGSSQNLLKGGAKGSQQLSFIAPQDGQIELYLGNRLLLSKSVSSGR EECCCCCCEEEEEEECCCCCHHHCCCCCCCEEEEECCCCCEEEEEECCEEEEECCHHHHH QSISYSELPQGAYTVNLKLISAGTVLIDDMIQVVNNNNFILASGDVDYAFNAGVFDTKKF HCCCHHHCCCCEEEEEEEEEECCHHHHHHHHHHHCCCCEEEEECCCCEEECCCCCCCHHH RHTTHDYFNDVHTTENDFKRGYLQAKSSWRLAEPVILYSGITTNVDEHYSQIGARYIYED HCCHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHH LFSADYFLGYFSTGDIYQSANIKFGRLSLSAKAFDLDYNTRNFTLSNQLYGTNPYKNFSI HHCCCEEEEEECCCCEEECCCEEEEEEEEEEEEEEECCCCCEEEEECCEECCCCCCCEEE SYSKPFFGGNGYLNYNNYSSKNYYGINNDNSIVIEKPIDYIYNINALNNVLNNALNNGSY EECCCEECCCCEEECCCCCCCCEEEECCCCEEEEECCCCCEEECHHHHHHHHHHCCCCCE STISNENYNIGWSTNIYSGTLTLNSNYNSNSAYDEVKFGIYWSQRFGKSVAGGLSVMTNN EEECCCCEEECEECCEEEEEEEECCCCCCCCCCCEEEEEEEEHHHHCCHHHCCEEEEECC KGSSQYNNSLSLNASNDNWYANHTVMASLLNDDNDDNFESSLSGTYYWQNDKATVNAYNY CCCCCCCCEEEEECCCCCEEECHHEEEEECCCCCCCCCHHCCCCEEEEECCCEEEEEEEE VNSKGLLISSGTLQSTQVVSADSISLTKSNGNAFASINLESDIPISKIRYNLYSDKYSKS ECCCCEEEECCCCCCEEEEECCCEEEEECCCCEEEEEEECCCCCHHHEEEEECCCCCCCC GYISGSENTILDINPYDQVLFSLDDVNNVEILSPTESKFVYPGTVISIDNVIKSLDSQVF CEECCCCCEEEEECCHHHHHEEECCCCCEEEECCCCCCEECCCEEEEHHHHHHHCCCCEE IVSDILGKPVSQIRCSGNGCRGVEPLSNDGVFRVKFQKGSTFTLTSERRQCVFDKDEPKK EEEHHHCCCCHHEEECCCCCCCCCCCCCCCEEEEEEECCCEEEEECCCCCCCCCCCCHHH YINAVCLQGLYHADDNEITQADETEGTLGDIEGFAYIGYTLNMNTVDALEKVGLPFKSIF HHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCHHHHHHHHCCCHHHEE VGKTQYIYVRHSNSYSSVQLDVLESIGAKLIPNNIDIQTLFTGYFYHE ECCEEEEEEEECCCCCEEEEEHHHHCCCEECCCCCEEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA