| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160873736
Identifier: 160873736
GI number: 160873736
Start: 727798
End: 730740
Strand: Reverse
Name: 160873736
Synonym: Sbal195_0614
Alternate gene names: NA
Gene position: 730740-727798 (Counterclockwise)
Preceding gene: 160873743
Following gene: 160873735
Centisome position: 13.67
GC content: 47.6
Gene sequence:
>2943_bases ATGTTTTACCCAGGCATCAAGTCGTACCAAGCGCTAACCGCCATTTACCTTGTGCTTTTACTTGCTTTGTTCGGGTGCGG CTCCGACTCCGACCAAGATGCCGCACCGACTGTGACGTCCACAGCAACGACCCTTGCGGCATTAAATGGCATAGAAGTGG TTCAGCCTGGTGTATTGGCTGATATTGACTTAGTTAACTTGGTAAAGGCTAATGGCAAAGTCGTTATTAAAAATGTTTAC ACCGAGCAGGTGCGCTGCCCAACACCGGAAGTGAGTGTGAGAGGGTTTAATGTCTATCCACAATCAGGGGTAGCGTGTGA TTATCACTACACTGTTGAGGCTGGCTCATTACAAGCATCGGCTCGTGTCACCGTGCTCGCCACTCGCGCAGAAAATCCGA TTATTCCGCCTTTATCGCACCCAATGTCACTCGATAGTGCTGGCGTTGCCTTTGATTTTGATTTAGTGCAGCTTCTGGGG GCTGAATTTCCTAATGGTTACAACCTGACCAGTGTAGAGATGATGCCCGCACAAAATGGTGATGCAGGGCAGCAAGGGAG TGTTATTTTCAGTGGTAATACCGTCACCTATACTCCACCTGCACGCATTGGTTTTGATGGTATCACCTACACCCTGCAGA AAGATGGTAACCCCGAATTTACTGTTATTGGTTCTATCTACATTACGATATCGAACAGCCCTAACGAAGCACCTGTTATT GAGTTTCCCAATTTTAGTTATCAGCCTACCCCGGGTTTTATCGCAAGGGCAGAATACAGTATTGACCTTGCGCAAGCGGG GATGACAATTAGTGTTGCCAATGGCAAAGAATACCATTTGCAACACGTTCAGAGCCCTACTGCAACGGTAAGCCCTTATG ACAATGCTGACAACAATAAACGTATTAGGTTTCAAGCGGCAACCCCGGGTGAGCACCTAGTGAGTTATATTGTGGCCGAT GATTTTGGTGGTTTTACTATGGGGTTTATTAAGGTTCAGGTTGATGCGGTACTCAACCCCGTAACTTGGAGTGACTTAGA GATTGAAGGTCGTACGTTTACCGCCCCTGTACTTTACACACCCCAGCTTACTAACATGTTTAACGCTATACCCGTCTGGG ATGACAGTGTGAACAACAATACCATACCGGTAACGACAGTCACTTTGACACCTCCCCCTAGTGGCGCAGCAACCGTGTTT GGGAATACCCTTGCGGCATTTAGAAGTTATTCAGCAGCTCAAGCTTACTGTGGCACTCGTGGTGGGCGCCTGCCATCTTA CGATGAATCACTCGTCATAGAAGGGTTGCAGGTCGGGGTTGACGAGTTCGGGTTAATCAACACTGCTCCAGGTTGGCCTA AGGGGAGGCCATATGCACTAATGCTTAATGGTGCGGAGCCTGCGGGCTTTCCTTGGGAGCGAGGGGCGTACGTCACTTGT GTTAAACACACCGCTATGGAGCTTGATTTAGTTGCCACTGAGTTTGAACGGTTCGCAAGAGATTCAGGCGCGCTTTTGTC ACAAGAGCTTGGCACCTTAACAACCGAGTTTCCCATGCAGCAAATTACTCACAAGATTATTGGCGGCTCTCTCATGAATT ATCCGGAGTCGATAGTGATTGAGCGTCTCAGTGACGGTAATAGACTGCACCGAATTACCGCACAGGCCTCGCGAAATGGG TATGCTACAATCCGTTTTTATGACACAACAAACCCCAAAAATTACATCGATACACCCATGTTGCGCTTTTTATCGATTGA CGTGCTCGATACGGATGGTGGTAAATTACTGACTGGCTCACCATCTAAACTAAATGTGGCTATCCTGCAGCGTGAATCGA CTAATACAATCGTAACCGCTGATGTCGATAGGCATGACATTAACGCTGGATTTATGTACGGAGCATTTGTGCTCAGTTCG GGCCAAAAAGTATGCCAACTCTATAATGATGTAACTCTTTATGGTCGGTCGAATTGGGTCATGTCAACATACTCCGAACT TCGAAGCATTGCGGCTCACGATGATATGAAGGCATTGGGTTGGCCGACAGTGCAATATTATAAGTCAGGTGACTCTTGCG CCCCTAATAAGCAACAACATTTTTATATCGACGGACGAGGTAATCTAGGTGGTTCCGGTTGTAATGCGGCGGAATCATTT TTTTCATTTATATCCTGCTCCTCAGACATACCTGTGGATAACGATAAATCAACCATAGCGGTCATAATTAATAATGCACT CGCAAACAACACCGAGACAAATCAGGTGAGCGTTACCGTGCGTGATGCTAGAAATGCGCTTGTATCTGGTGAAGAGGTTA GCTTTAGTGCCAGTAATGGTGCCACCGTTGAAACCCCGACGGTGCTCACCAATAGTAACGGTGTCGCCATCGCCAGCATA AAGAGTACCCAATCAGGCATCTCAACGATTACAGCCTCCTTCAATGGCACCACTAAGACTGTTGAAGTGACGTTTATTCT GGTTAATTGCCAGTCCTTAGGCCAGTCCTTAGAAGGTGCATGTATTGATATCTTTGATGCTGATAATAACGGTAAGTTAT TTACCAGCTCACCATCAGTGGCCTACCTAGACAGCATTGGTGGCAGTGCAACAGGTGATACTTATGAAGATGGATCTTTC GGCCCAGCTGGTGTTTTCTACTTATTCAACTGGAATAGCGCAAATGCACTGTGCACTACCTACATCACCAATCGTGTCGG CGGACGAACTAACTGGCGTTTAGCGACAAGAGACGAGTTAAAAGTGCAGCTGTTCGATAAACACGGCACCATGTATAGCG CCCGCGGTTGGCCGACCGGCAGGTTCTATTGGTCGGTGACACCTGATGGTTCTGACTATTACGACGTGTCCCTCTTCGTT GATGAAGTCATCAGCGGCCCTCCGTTCACCCTGAGCTACGCATCCTGCGTCTCAGAGCCTTAA
Upstream 100 bases:
>100_bases AACATACAACGGCGTTAACCGCGTTAAACCCTATCATCTTATACGGTTTCCGCTGGTTATCCTTCAATTGACGATAGATT GAAAATATTACGGAGTGTTT
Downstream 100 bases:
>100_bases CGTTGAAAATTTAGAGTTTAACGTTTAAATGTTAAAATCAATGCTAAAATGTAGAAGTGTAGTTTTGATGTGCCAGAGTA GCGTCTGGCGCTATTTTTAG
Product: Ig domain-containing protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 980; Mature: 980
Protein sequence:
>980_residues MFYPGIKSYQALTAIYLVLLLALFGCGSDSDQDAAPTVTSTATTLAALNGIEVVQPGVLADIDLVNLVKANGKVVIKNVY TEQVRCPTPEVSVRGFNVYPQSGVACDYHYTVEAGSLQASARVTVLATRAENPIIPPLSHPMSLDSAGVAFDFDLVQLLG AEFPNGYNLTSVEMMPAQNGDAGQQGSVIFSGNTVTYTPPARIGFDGITYTLQKDGNPEFTVIGSIYITISNSPNEAPVI EFPNFSYQPTPGFIARAEYSIDLAQAGMTISVANGKEYHLQHVQSPTATVSPYDNADNNKRIRFQAATPGEHLVSYIVAD DFGGFTMGFIKVQVDAVLNPVTWSDLEIEGRTFTAPVLYTPQLTNMFNAIPVWDDSVNNNTIPVTTVTLTPPPSGAATVF GNTLAAFRSYSAAQAYCGTRGGRLPSYDESLVIEGLQVGVDEFGLINTAPGWPKGRPYALMLNGAEPAGFPWERGAYVTC VKHTAMELDLVATEFERFARDSGALLSQELGTLTTEFPMQQITHKIIGGSLMNYPESIVIERLSDGNRLHRITAQASRNG YATIRFYDTTNPKNYIDTPMLRFLSIDVLDTDGGKLLTGSPSKLNVAILQRESTNTIVTADVDRHDINAGFMYGAFVLSS GQKVCQLYNDVTLYGRSNWVMSTYSELRSIAAHDDMKALGWPTVQYYKSGDSCAPNKQQHFYIDGRGNLGGSGCNAAESF FSFISCSSDIPVDNDKSTIAVIINNALANNTETNQVSVTVRDARNALVSGEEVSFSASNGATVETPTVLTNSNGVAIASI KSTQSGISTITASFNGTTKTVEVTFILVNCQSLGQSLEGACIDIFDADNNGKLFTSSPSVAYLDSIGGSATGDTYEDGSF GPAGVFYLFNWNSANALCTTYITNRVGGRTNWRLATRDELKVQLFDKHGTMYSARGWPTGRFYWSVTPDGSDYYDVSLFV DEVISGPPFTLSYASCVSEP
Sequences:
>Translated_980_residues MFYPGIKSYQALTAIYLVLLLALFGCGSDSDQDAAPTVTSTATTLAALNGIEVVQPGVLADIDLVNLVKANGKVVIKNVY TEQVRCPTPEVSVRGFNVYPQSGVACDYHYTVEAGSLQASARVTVLATRAENPIIPPLSHPMSLDSAGVAFDFDLVQLLG AEFPNGYNLTSVEMMPAQNGDAGQQGSVIFSGNTVTYTPPARIGFDGITYTLQKDGNPEFTVIGSIYITISNSPNEAPVI EFPNFSYQPTPGFIARAEYSIDLAQAGMTISVANGKEYHLQHVQSPTATVSPYDNADNNKRIRFQAATPGEHLVSYIVAD DFGGFTMGFIKVQVDAVLNPVTWSDLEIEGRTFTAPVLYTPQLTNMFNAIPVWDDSVNNNTIPVTTVTLTPPPSGAATVF GNTLAAFRSYSAAQAYCGTRGGRLPSYDESLVIEGLQVGVDEFGLINTAPGWPKGRPYALMLNGAEPAGFPWERGAYVTC VKHTAMELDLVATEFERFARDSGALLSQELGTLTTEFPMQQITHKIIGGSLMNYPESIVIERLSDGNRLHRITAQASRNG YATIRFYDTTNPKNYIDTPMLRFLSIDVLDTDGGKLLTGSPSKLNVAILQRESTNTIVTADVDRHDINAGFMYGAFVLSS GQKVCQLYNDVTLYGRSNWVMSTYSELRSIAAHDDMKALGWPTVQYYKSGDSCAPNKQQHFYIDGRGNLGGSGCNAAESF FSFISCSSDIPVDNDKSTIAVIINNALANNTETNQVSVTVRDARNALVSGEEVSFSASNGATVETPTVLTNSNGVAIASI KSTQSGISTITASFNGTTKTVEVTFILVNCQSLGQSLEGACIDIFDADNNGKLFTSSPSVAYLDSIGGSATGDTYEDGSF GPAGVFYLFNWNSANALCTTYITNRVGGRTNWRLATRDELKVQLFDKHGTMYSARGWPTGRFYWSVTPDGSDYYDVSLFV DEVISGPPFTLSYASCVSEP >Mature_980_residues MFYPGIKSYQALTAIYLVLLLALFGCGSDSDQDAAPTVTSTATTLAALNGIEVVQPGVLADIDLVNLVKANGKVVIKNVY TEQVRCPTPEVSVRGFNVYPQSGVACDYHYTVEAGSLQASARVTVLATRAENPIIPPLSHPMSLDSAGVAFDFDLVQLLG AEFPNGYNLTSVEMMPAQNGDAGQQGSVIFSGNTVTYTPPARIGFDGITYTLQKDGNPEFTVIGSIYITISNSPNEAPVI EFPNFSYQPTPGFIARAEYSIDLAQAGMTISVANGKEYHLQHVQSPTATVSPYDNADNNKRIRFQAATPGEHLVSYIVAD DFGGFTMGFIKVQVDAVLNPVTWSDLEIEGRTFTAPVLYTPQLTNMFNAIPVWDDSVNNNTIPVTTVTLTPPPSGAATVF GNTLAAFRSYSAAQAYCGTRGGRLPSYDESLVIEGLQVGVDEFGLINTAPGWPKGRPYALMLNGAEPAGFPWERGAYVTC VKHTAMELDLVATEFERFARDSGALLSQELGTLTTEFPMQQITHKIIGGSLMNYPESIVIERLSDGNRLHRITAQASRNG YATIRFYDTTNPKNYIDTPMLRFLSIDVLDTDGGKLLTGSPSKLNVAILQRESTNTIVTADVDRHDINAGFMYGAFVLSS GQKVCQLYNDVTLYGRSNWVMSTYSELRSIAAHDDMKALGWPTVQYYKSGDSCAPNKQQHFYIDGRGNLGGSGCNAAESF FSFISCSSDIPVDNDKSTIAVIINNALANNTETNQVSVTVRDARNALVSGEEVSFSASNGATVETPTVLTNSNGVAIASI KSTQSGISTITASFNGTTKTVEVTFILVNCQSLGQSLEGACIDIFDADNNGKLFTSSPSVAYLDSIGGSATGDTYEDGSF GPAGVFYLFNWNSANALCTTYITNRVGGRTNWRLATRDELKVQLFDKHGTMYSARGWPTGRFYWSVTPDGSDYYDVSLFV DEVISGPPFTLSYASCVSEP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 105590; Mature: 105590
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51127 BIG1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFYPGIKSYQALTAIYLVLLLALFGCGSDSDQDAAPTVTSTATTLAALNGIEVVQPGVLA CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCEEECCCCEE DIDLVNLVKANGKVVIKNVYTEQVRCPTPEVSVRGFNVYPQSGVACDYHYTVEAGSLQAS CCCEEEEEECCCEEEEEEEECCCEECCCCCEEEEEEEECCCCCEEEEEEEEEECCCEECC ARVTVLATRAENPIIPPLSHPMSLDSAGVAFDFDLVQLLGAEFPNGYNLTSVEMMPAQNG EEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHCCCCCCCCEEEEEEEECCCC DAGQQGSVIFSGNTVTYTPPARIGFDGITYTLQKDGNPEFTVIGSIYITISNSPNEAPVI CCCCCCCEEECCCEEEECCCCCCCCCCEEEEEECCCCCCEEEEEEEEEEECCCCCCCCEE EFPNFSYQPTPGFIARAEYSIDLAQAGMTISVANGKEYHLQHVQSPTATVSPYDNADNNK ECCCCCCCCCCCEEEEEEEEEEEECCCCEEEEECCCEEEHHHCCCCCCEECCCCCCCCCC RIRFQAATPGEHLVSYIVADDFGGFTMGFIKVQVDAVLNPVTWSDLEIEGRTFTAPVLYT EEEEEECCCHHHHHEEEEECCCCCEEEEEEEEEEEHEECCCCCCCEEECCCEEEEEEEEC PQLTNMFNAIPVWDDSVNNNTIPVTTVTLTPPPSGAATVFGNTLAAFRSYSAAQAYCGTR CCHHHHHCCCCCCCCCCCCCEEEEEEEEECCCCCCCEEEHHHHHHHHHCCCHHHHHHCCC GGRLPSYDESLVIEGLQVGVDEFGLINTAPGWPKGRPYALMLNGAEPAGFPWERGAYVTC CCCCCCCCCHHEEEHHHCCCCCCCEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEE VKHTAMELDLVATEFERFARDSGALLSQELGTLTTEFPMQQITHKIIGGSLMNYPESIVI EECCCEEEEHHHHHHHHHHCCCCCHHHHHHHCHHHHCCHHHHHHHHHCCHHHCCCHHHHH ERLSDGNRLHRITAQASRNGYATIRFYDTTNPKNYIDTPMLRFLSIDVLDTDGGKLLTGS HHCCCCCEEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCEEEEEEEEEECCCCEEEECC PSKLNVAILQRESTNTIVTADVDRHDINAGFMYGAFVLSSGQKVCQLYNDVTLYGRSNWV CCEEEEEEEEECCCCEEEEEECCCCCCCCCEEEEEEEECCCHHHHHHHCCEEEEECCCCC MSTYSELRSIAAHDDMKALGWPTVQYYKSGDSCAPNKQQHFYIDGRGNLGGSGCNAAESF HHHHHHHHHHHHCCCCHHCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCHHHHHH FSFISCSSDIPVDNDKSTIAVIINNALANNTETNQVSVTVRDARNALVSGEEVSFSASNG HHHHHCCCCCCCCCCCCEEEEEEECHHCCCCCCCEEEEEEECCCCHHCCCCEEEEECCCC ATVETPTVLTNSNGVAIASIKSTQSGISTITASFNGTTKTVEVTFILVNCQSLGQSLEGA CEEECCEEEECCCCEEEEEECCCCCCCEEEEEECCCCEEEEEEEEEEEEEHHHCCCCCCC CIDIFDADNNGKLFTSSPSVAYLDSIGGSATGDTYEDGSFGPAGVFYLFNWNSANALCTT EEEEEECCCCCEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEE YITNRVGGRTNWRLATRDELKVQLFDKHGTMYSARGWPTGRFYWSVTPDGSDYYDVSLFV EHHHCCCCCCCEEEEECCCEEEEEEECCCCEEECCCCCCCEEEEEECCCCCCEEEEEEEH DEVISGPPFTLSYASCVSEP HHHHCCCCCEEEHHHHCCCC >Mature Secondary Structure MFYPGIKSYQALTAIYLVLLLALFGCGSDSDQDAAPTVTSTATTLAALNGIEVVQPGVLA CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCEEECCCCEE DIDLVNLVKANGKVVIKNVYTEQVRCPTPEVSVRGFNVYPQSGVACDYHYTVEAGSLQAS CCCEEEEEECCCEEEEEEEECCCEECCCCCEEEEEEEECCCCCEEEEEEEEEECCCEECC ARVTVLATRAENPIIPPLSHPMSLDSAGVAFDFDLVQLLGAEFPNGYNLTSVEMMPAQNG EEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHCCCCCCCCEEEEEEEECCCC DAGQQGSVIFSGNTVTYTPPARIGFDGITYTLQKDGNPEFTVIGSIYITISNSPNEAPVI CCCCCCCEEECCCEEEECCCCCCCCCCEEEEEECCCCCCEEEEEEEEEEECCCCCCCCEE EFPNFSYQPTPGFIARAEYSIDLAQAGMTISVANGKEYHLQHVQSPTATVSPYDNADNNK ECCCCCCCCCCCEEEEEEEEEEEECCCCEEEEECCCEEEHHHCCCCCCEECCCCCCCCCC RIRFQAATPGEHLVSYIVADDFGGFTMGFIKVQVDAVLNPVTWSDLEIEGRTFTAPVLYT EEEEEECCCHHHHHEEEEECCCCCEEEEEEEEEEEHEECCCCCCCEEECCCEEEEEEEEC PQLTNMFNAIPVWDDSVNNNTIPVTTVTLTPPPSGAATVFGNTLAAFRSYSAAQAYCGTR CCHHHHHCCCCCCCCCCCCCEEEEEEEEECCCCCCCEEEHHHHHHHHHCCCHHHHHHCCC GGRLPSYDESLVIEGLQVGVDEFGLINTAPGWPKGRPYALMLNGAEPAGFPWERGAYVTC CCCCCCCCCHHEEEHHHCCCCCCCEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEE VKHTAMELDLVATEFERFARDSGALLSQELGTLTTEFPMQQITHKIIGGSLMNYPESIVI EECCCEEEEHHHHHHHHHHCCCCCHHHHHHHCHHHHCCHHHHHHHHHCCHHHCCCHHHHH ERLSDGNRLHRITAQASRNGYATIRFYDTTNPKNYIDTPMLRFLSIDVLDTDGGKLLTGS HHCCCCCEEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCEEEEEEEEEECCCCEEEECC PSKLNVAILQRESTNTIVTADVDRHDINAGFMYGAFVLSSGQKVCQLYNDVTLYGRSNWV CCEEEEEEEEECCCCEEEEEECCCCCCCCCEEEEEEEECCCHHHHHHHCCEEEEECCCCC MSTYSELRSIAAHDDMKALGWPTVQYYKSGDSCAPNKQQHFYIDGRGNLGGSGCNAAESF HHHHHHHHHHHHCCCCHHCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCHHHHHH FSFISCSSDIPVDNDKSTIAVIINNALANNTETNQVSVTVRDARNALVSGEEVSFSASNG HHHHHCCCCCCCCCCCCEEEEEEECHHCCCCCCCEEEEEEECCCCHHCCCCEEEEECCCC ATVETPTVLTNSNGVAIASIKSTQSGISTITASFNGTTKTVEVTFILVNCQSLGQSLEGA CEEECCEEEECCCCEEEEEECCCCCCCEEEEEECCCCEEEEEEEEEEEEEHHHCCCCCCC CIDIFDADNNGKLFTSSPSVAYLDSIGGSATGDTYEDGSFGPAGVFYLFNWNSANALCTT EEEEEECCCCCEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEE YITNRVGGRTNWRLATRDELKVQLFDKHGTMYSARGWPTGRFYWSVTPDGSDYYDVSLFV EHHHCCCCCCCEEEEECCCEEEEEEECCCCEEECCCCCCCEEEEEECCCCCCEEEEEEEH DEVISGPPFTLSYASCVSEP HHHHCCCCCEEEHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA