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The map label for this gene is yncI [H]

Identifier: 160873716

GI number: 160873716

Start: 695456

End: 695803

Strand: Reverse

Name: yncI [H]

Synonym: Sbal195_0594

Alternate gene names: 160873716

Gene position: 695803-695456 (Counterclockwise)

Preceding gene: 160873720

Following gene: 160873715

Centisome position: 13.01

GC content: 45.69

Gene sequence:

>348_bases
ATGTCACTTTTTGATCACCTATCTTTAGTCGAAGACACGCGCTCACACATTAATCAACGCCACAACCTTGTCGACGTACT
GTTCTTAATGTTATCGGTAGTAGCCAGTGGGCAAGATGGTTGGGCAGAAATTCAACAGCTCGGCGAGCTAAAACTTGAGT
GGCTACGTAAGTTTCGTCCATTTGCTAATGGCATTTCCCGTCGGCATACCATAACACGTATCCTGAAAGCCGTAGGGCCG
GAAATTTGCAGTTGTGCCTATTCAGTTGGATTAACGACATCCGCACCGCATCTGCTAAACCCATCATTGCAATTGATGGT
AAAACACTTAGAGGTGCCTCTAAGTTAG

Upstream 100 bases:

>100_bases
CAGGACAAAAACACCCAGGGCGAGATCGCACTTTTTTAAAAAATGAACTATTGCGCAATACCATGATCTGAATGAGAAAT
TAATTACTTGGCTACTCTCC

Downstream 100 bases:

>100_bases
GCTGCAATACCTTACATTCTGTGGGTGCGTTCGACATTAATAATGGCTTGGTGCTTTATCAAGAAATGGCCTCTGTAAAA
GGTAAGGAAATTGAAACGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 115; Mature: 114

Protein sequence:

>115_residues
MSLFDHLSLVEDTRSHINQRHNLVDVLFLMLSVVASGQDGWAEIQQLGELKLEWLRKFRPFANGISRRHTITRILKAVGP
EICSCAYSVGLTTSAPHLLNPSLQLMVKHLEVPLS

Sequences:

>Translated_115_residues
MSLFDHLSLVEDTRSHINQRHNLVDVLFLMLSVVASGQDGWAEIQQLGELKLEWLRKFRPFANGISRRHTITRILKAVGP
EICSCAYSVGLTTSAPHLLNPSLQLMVKHLEVPLS
>Mature_114_residues
SLFDHLSLVEDTRSHINQRHNLVDVLFLMLSVVASGQDGWAEIQQLGELKLEWLRKFRPFANGISRRHTITRILKAVGPE
ICSCAYSVGLTTSAPHLLNPSLQLMVKHLEVPLS

Specific function: Unknown

COG id: COG5433

COG function: function code L; Transposase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 11 family [H]

Homologues:

Organism=Escherichia coli, GI1789896, Length=78, Percent_Identity=35.8974358974359, Blast_Score=67, Evalue=4e-13,
Organism=Escherichia coli, GI1787733, Length=78, Percent_Identity=34.6153846153846, Blast_Score=64, Evalue=3e-12,
Organism=Escherichia coli, GI1786924, Length=79, Percent_Identity=34.1772151898734, Blast_Score=62, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002559 [H]

Pfam domain/function: PF01609 Transposase_11 [H]

EC number: NA

Molecular weight: Translated: 12942; Mature: 12811

Theoretical pI: Translated: 8.27; Mature: 8.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLFDHLSLVEDTRSHINQRHNLVDVLFLMLSVVASGQDGWAEIQQLGELKLEWLRKFRP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
FANGISRRHTITRILKAVGPEICSCAYSVGLTTSAPHLLNPSLQLMVKHLEVPLS
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCHHHCHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SLFDHLSLVEDTRSHINQRHNLVDVLFLMLSVVASGQDGWAEIQQLGELKLEWLRKFRP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
FANGISRRHTITRILKAVGPEICSCAYSVGLTTSAPHLLNPSLQLMVKHLEVPLS
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCHHHCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]