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The map label for this gene is ybfL [H]

Identifier: 160873715

GI number: 160873715

Start: 694695

End: 695558

Strand: Reverse

Name: ybfL [H]

Synonym: Sbal195_0593

Alternate gene names: 160873715

Gene position: 695558-694695 (Counterclockwise)

Preceding gene: 160873716

Following gene: 160873712

Centisome position: 13.01

GC content: 42.94

Gene sequence:

>864_bases
TTGCAGTTGTGCCTATTCAGTTGGATTAACGACATCCGCACCGCATCTGCTAAACCCATCATTGCAATTGATGGTAAAAC
ACTTAGAGGTGCCTCTAAGTTAGGCTGCAATACCTTACATTCTGTGGGTGCGTTCGACATTAATAATGGCTTGGTGCTTT
ATCAAGAAATGGCCTCTGTAAAAGGTAAGGAAATTGAAACGGTACAATCACTTATTACCATGCTTAACATAAATAAAGCA
TTGATAACCTTGGATGCTTTGCATGCCCAACGCGCGACGCTGGAAGCGATAGTCGCTCGTAAAGGAGATTATGTGGTGCA
GGTAAAAAGTAATCAGCGGACTTTATTTCAAGCAGTTAAAGCGCAGTATGATGTGGCCTTCCAAAATGACAGTCAGTTAG
CCCAATTTGCCTGTTCGGAAAAAGGGCATGGAAGAACAGAGCAGCGGATTACATTTCAAATCCCATCGAAGCTGAGTCCT
AAATCACAAGAAAAGTGGCCTTCAGCTAAGACATTAATAGCCGTTGAGCGACACAGAAAAATAGGCAATAAGACCAGCAT
AGAGACCAGTTTCTATCTTTCATCCCATGATATCGCTCCCGAATATATTGCGACTGCTGTCCGAGGGCACTGGCGAATTG
AGAATAGTCTGCACTGGGTCCTGGATGTGGTTTATCGAGAAGATGCTTGTCGGGTTCACGAGCAAAGAACTGCCGAATCA
CTGGCGATAGTGAGGCGAATGGCCCTGAATCTAGCAAAATTCGAAATAACACAAAAACGCAGTATGAAGAGTAAGTTACA
TCGTTCTTTGCTCAGTGATGAATATCGGGAATTGATGATTTTTGCGGATGTTAAATCAATTTAA

Upstream 100 bases:

>100_bases
AGCTAAAACTTGAGTGGCTACGTAAGTTTCGTCCATTTGCTAATGGCATTTCCCGTCGGCATACCATAACACGTATCCTG
AAAGCCGTAGGGCCGGAAAT

Downstream 100 bases:

>100_bases
CAAAGTATGCTCCGGCCCTGATGCCTGGGTAAAACATAAACACTCCGTAATATTTTCAATCTATCGTCAATTGGAAAGTA
AACCAAGGGTGGGTTCTGCG

Product: transposase IS4 family protein

Products: NA

Alternate protein names: H repeat-associated protein in rhsC-phrB intergenic region; ORF-H2 [H]

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MQLCLFSWINDIRTASAKPIIAIDGKTLRGASKLGCNTLHSVGAFDINNGLVLYQEMASVKGKEIETVQSLITMLNINKA
LITLDALHAQRATLEAIVARKGDYVVQVKSNQRTLFQAVKAQYDVAFQNDSQLAQFACSEKGHGRTEQRITFQIPSKLSP
KSQEKWPSAKTLIAVERHRKIGNKTSIETSFYLSSHDIAPEYIATAVRGHWRIENSLHWVLDVVYREDACRVHEQRTAES
LAIVRRMALNLAKFEITQKRSMKSKLHRSLLSDEYRELMIFADVKSI

Sequences:

>Translated_287_residues
MQLCLFSWINDIRTASAKPIIAIDGKTLRGASKLGCNTLHSVGAFDINNGLVLYQEMASVKGKEIETVQSLITMLNINKA
LITLDALHAQRATLEAIVARKGDYVVQVKSNQRTLFQAVKAQYDVAFQNDSQLAQFACSEKGHGRTEQRITFQIPSKLSP
KSQEKWPSAKTLIAVERHRKIGNKTSIETSFYLSSHDIAPEYIATAVRGHWRIENSLHWVLDVVYREDACRVHEQRTAES
LAIVRRMALNLAKFEITQKRSMKSKLHRSLLSDEYRELMIFADVKSI
>Mature_287_residues
MQLCLFSWINDIRTASAKPIIAIDGKTLRGASKLGCNTLHSVGAFDINNGLVLYQEMASVKGKEIETVQSLITMLNINKA
LITLDALHAQRATLEAIVARKGDYVVQVKSNQRTLFQAVKAQYDVAFQNDSQLAQFACSEKGHGRTEQRITFQIPSKLSP
KSQEKWPSAKTLIAVERHRKIGNKTSIETSFYLSSHDIAPEYIATAVRGHWRIENSLHWVLDVVYREDACRVHEQRTAES
LAIVRRMALNLAKFEITQKRSMKSKLHRSLLSDEYRELMIFADVKSI

Specific function: Unknown

COG id: COG5433

COG function: function code L; Transposase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 11 family [H]

Homologues:

Organism=Escherichia coli, GI1787733, Length=280, Percent_Identity=33.5714285714286, Blast_Score=157, Evalue=1e-39,
Organism=Escherichia coli, GI1789896, Length=280, Percent_Identity=32.5, Blast_Score=155, Evalue=3e-39,
Organism=Escherichia coli, GI1786924, Length=158, Percent_Identity=32.2784810126582, Blast_Score=84, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002559 [H]

Pfam domain/function: PF01609 Transposase_11 [H]

EC number: NA

Molecular weight: Translated: 32458; Mature: 32458

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLCLFSWINDIRTASAKPIIAIDGKTLRGASKLGCNTLHSVGAFDINNGLVLYQEMASV
CCCHHHHHHHHHHHCCCCCEEEECCCEECCCHHHCCHHHHHCCCEECCCCEEEEEHHHHC
KGKEIETVQSLITMLNINKALITLDALHAQRATLEAIVARKGDYVVQVKSNQRTLFQAVK
CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHH
AQYDVAFQNDSQLAQFACSEKGHGRTEQRITFQIPSKLSPKSQEKWPSAKTLIAVERHRK
HHHCEEECCCHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCHHHCCCHHHHHHHHHHHH
IGNKTSIETSFYLSSHDIAPEYIATAVRGHWRIENSLHWVLDVVYREDACRVHEQRTAES
CCCCCCCEEEEEECCCCCCHHHHHHHHHCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
LAIVRRMALNLAKFEITQKRSMKSKLHRSLLSDEYRELMIFADVKSI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCC
>Mature Secondary Structure
MQLCLFSWINDIRTASAKPIIAIDGKTLRGASKLGCNTLHSVGAFDINNGLVLYQEMASV
CCCHHHHHHHHHHHCCCCCEEEECCCEECCCHHHCCHHHHHCCCEECCCCEEEEEHHHHC
KGKEIETVQSLITMLNINKALITLDALHAQRATLEAIVARKGDYVVQVKSNQRTLFQAVK
CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHH
AQYDVAFQNDSQLAQFACSEKGHGRTEQRITFQIPSKLSPKSQEKWPSAKTLIAVERHRK
HHHCEEECCCHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCHHHCCCHHHHHHHHHHHH
IGNKTSIETSFYLSSHDIAPEYIATAVRGHWRIENSLHWVLDVVYREDACRVHEQRTAES
CCCCCCCEEEEEECCCCCCHHHHHHHHHCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
LAIVRRMALNLAKFEITQKRSMKSKLHRSLLSDEYRELMIFADVKSI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8387990; 8905232; 9278503 [H]