| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160873712
Identifier: 160873712
GI number: 160873712
Start: 687909
End: 688157
Strand: Reverse
Name: 160873712
Synonym: Sbal195_0590
Alternate gene names: NA
Gene position: 688157-687909 (Counterclockwise)
Preceding gene: 160873715
Following gene: 160873711
Centisome position: 12.87
GC content: 46.59
Gene sequence:
>249_bases ATGCCGACCATATTGGTCGATGGGTCAGATATTCGTGAAGGTCCTGAGCTGGTTTCGCTACGTACCTCTATTGCTACACT CCACGAGCTCATATTTTCACTCGTGCTTCAAGGCGCTCAAACTGCACATAACCCGTTCCTAAATGAACGCCATAAAGTCT TACCTGACAATATCACTCCAGTGATAGTCATGGACGCAGGCTTTCGTAATCCATGGTTTCGAAAAATCGAGCAGCTCGGT TGGTATTAG
Upstream 100 bases:
>100_bases CAATAAATCCCATGGATAGATTAAGGGTCCCTCGCATGGTCACCGTGAAAGATTGGCTGTTTATCGGTGGCATGCAAAGT GTGTGCTGACAACACATACA
Downstream 100 bases:
>100_bases TTTGGTCGCCTCAGAGGGTTGAGTACCTATCGGCTACACCTCTTCGGTTGCCAATTTTCACTAAATGGACTTTATCCTCA AGCCCGTCGTCGCGAAAAAT
Product: ISSod3, transposase
Products: NA
Alternate protein names: Transposase; Transposase IS; ISSod3 Transposase
Number of amino acids: Translated: 82; Mature: 81
Protein sequence:
>82_residues MPTILVDGSDIREGPELVSLRTSIATLHELIFSLVLQGAQTAHNPFLNERHKVLPDNITPVIVMDAGFRNPWFRKIEQLG WY
Sequences:
>Translated_82_residues MPTILVDGSDIREGPELVSLRTSIATLHELIFSLVLQGAQTAHNPFLNERHKVLPDNITPVIVMDAGFRNPWFRKIEQLG WY >Mature_81_residues PTILVDGSDIREGPELVSLRTSIATLHELIFSLVLQGAQTAHNPFLNERHKVLPDNITPVIVMDAGFRNPWFRKIEQLGW Y
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9325; Mature: 9194
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTILVDGSDIREGPELVSLRTSIATLHELIFSLVLQGAQTAHNPFLNERHKVLPDNITP CCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCE VIVMDAGFRNPWFRKIEQLGWY EEEECCCCCCHHHHHHHHHCCC >Mature Secondary Structure PTILVDGSDIREGPELVSLRTSIATLHELIFSLVLQGAQTAHNPFLNERHKVLPDNITP CEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCE VIVMDAGFRNPWFRKIEQLGWY EEEECCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA