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The map label for this gene is ybfL [H]

Identifier: 160873711

GI number: 160873711

Start: 685726

End: 686835

Strand: Reverse

Name: ybfL [H]

Synonym: Sbal195_0589

Alternate gene names: 160873711

Gene position: 686835-685726 (Counterclockwise)

Preceding gene: 160873712

Following gene: 160873701

Centisome position: 12.84

GC content: 44.5

Gene sequence:

>1110_bases
ATGTCACTTTTTGATCACCTATCTTTAGTCGAAGACACGCGCTCACACATTAATCAACGCCACAACCTTGTCGACGTACT
GTTCTTAATCTTATCGGCAGTAGCCAGTGGGCAAGATGGTTGGGCAGAAATTCAACAGTTCGGCGAGCTAAAACTTGAGT
GGCTACGTAAGTTTCGTCCATTTGCTAATGGCATTCCCCGTCGGCATACCATAGCACGTATCCTAAAAGCCGTAGGGCCG
GAGAATTTGCAGTTGTGCCTATTCAGTTGGATTAACGACATCCGCACCGCATCAGCTAAACCCATCATTGCTATCGATGG
TAAAACACTCAGAGGTGCCTCTAAGTTAGGGTGCAACACCTTACATTCCGTGGGTGCGTTCGACATTAATAATGGCTTGG
CGCTTTATCAAGAAATGGCCTCTGGAAAAGGCAAGGAAATTGAAACGGTACAATCACTTATTACCATGCTTAACATAAAT
AAAGCATTGATAACCATGGATGCTTTGCATGCCCAACGCGCGACGCTGGAAGCGATAGTCGCTCGTAAAGGAGATTATGT
GGTGCAGGTGAAAAGTAATCAACGGACTTTATTTCAAGCAGTTAAAGCGCAGTATGATGTGGCCTTCCAAGATGACAGTC
AGTTAGCCCAATTTGCCTGTTCGGAAAAAGGGCATGGAAGAACAGAGCAGCGGATTACATTTCAAATCCCATCGAAGCTG
AGTCCTAAATTGCAAGAAAAGTGGCCTTCAGTTAAGACATTAATAGCCGTTGAGCGACACAGAAAAATAGGCAATAAGAC
CAGCATAGAGACCAGTTTCTATCTCTCATCCCATGATATCGATCCCGAATATATTGCGACTGCTGTCCGAGGGCACTGGC
GAATTGAGAATAGTCTGCACTGGGTCCTGGATGTGGTTTATCGAGAAGATGCTTGTCGGGTTCACGAGCAAAGAACTGCC
GAATCACTGGCGATAGTGAGGCGAATGGCCCTGAATCTGGCAAAACTCGAAATAACACAAAAACGCAGTATGAAGAGTAA
GTTACATCGTTCTTTACTCAGTGATGAATATCGGGAATTGATGATTTTTGCAGATGTTAAATCAATTTAA

Upstream 100 bases:

>100_bases
GTACGTTACGCGCCAGGGCGAGATCGCACTTTGTTAAAAAAATTGAACTATTCCGCAATGCCATGATCTGAATGAGAAAT
TAATTACTTGGCCACTCTCC

Downstream 100 bases:

>100_bases
CAAAGTATGCTCCGGCCCTGACCTTTAACTTCCTTGAATTCATGAGTAGTGTCTTCCTCAAGCTGACATTTCTCACCTTC
GATAAACTTATAATTCTCAT

Product: transposase IS4 family protein

Products: NA

Alternate protein names: H repeat-associated protein in rhsC-phrB intergenic region; ORF-H2 [H]

Number of amino acids: Translated: 369; Mature: 368

Protein sequence:

>369_residues
MSLFDHLSLVEDTRSHINQRHNLVDVLFLILSAVASGQDGWAEIQQFGELKLEWLRKFRPFANGIPRRHTIARILKAVGP
ENLQLCLFSWINDIRTASAKPIIAIDGKTLRGASKLGCNTLHSVGAFDINNGLALYQEMASGKGKEIETVQSLITMLNIN
KALITMDALHAQRATLEAIVARKGDYVVQVKSNQRTLFQAVKAQYDVAFQDDSQLAQFACSEKGHGRTEQRITFQIPSKL
SPKLQEKWPSVKTLIAVERHRKIGNKTSIETSFYLSSHDIDPEYIATAVRGHWRIENSLHWVLDVVYREDACRVHEQRTA
ESLAIVRRMALNLAKLEITQKRSMKSKLHRSLLSDEYRELMIFADVKSI

Sequences:

>Translated_369_residues
MSLFDHLSLVEDTRSHINQRHNLVDVLFLILSAVASGQDGWAEIQQFGELKLEWLRKFRPFANGIPRRHTIARILKAVGP
ENLQLCLFSWINDIRTASAKPIIAIDGKTLRGASKLGCNTLHSVGAFDINNGLALYQEMASGKGKEIETVQSLITMLNIN
KALITMDALHAQRATLEAIVARKGDYVVQVKSNQRTLFQAVKAQYDVAFQDDSQLAQFACSEKGHGRTEQRITFQIPSKL
SPKLQEKWPSVKTLIAVERHRKIGNKTSIETSFYLSSHDIDPEYIATAVRGHWRIENSLHWVLDVVYREDACRVHEQRTA
ESLAIVRRMALNLAKLEITQKRSMKSKLHRSLLSDEYRELMIFADVKSI
>Mature_368_residues
SLFDHLSLVEDTRSHINQRHNLVDVLFLILSAVASGQDGWAEIQQFGELKLEWLRKFRPFANGIPRRHTIARILKAVGPE
NLQLCLFSWINDIRTASAKPIIAIDGKTLRGASKLGCNTLHSVGAFDINNGLALYQEMASGKGKEIETVQSLITMLNINK
ALITMDALHAQRATLEAIVARKGDYVVQVKSNQRTLFQAVKAQYDVAFQDDSQLAQFACSEKGHGRTEQRITFQIPSKLS
PKLQEKWPSVKTLIAVERHRKIGNKTSIETSFYLSSHDIDPEYIATAVRGHWRIENSLHWVLDVVYREDACRVHEQRTAE
SLAIVRRMALNLAKLEITQKRSMKSKLHRSLLSDEYRELMIFADVKSI

Specific function: Unknown

COG id: COG5433

COG function: function code L; Transposase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 11 family [H]

Homologues:

Organism=Escherichia coli, GI1789896, Length=363, Percent_Identity=33.3333333333333, Blast_Score=222, Evalue=4e-59,
Organism=Escherichia coli, GI1787733, Length=363, Percent_Identity=33.6088154269972, Blast_Score=220, Evalue=9e-59,
Organism=Escherichia coli, GI1786924, Length=242, Percent_Identity=33.0578512396694, Blast_Score=148, Evalue=7e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002559 [H]

Pfam domain/function: PF01609 Transposase_11 [H]

EC number: NA

Molecular weight: Translated: 41854; Mature: 41723

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLFDHLSLVEDTRSHINQRHNLVDVLFLILSAVASGQDGWAEIQQFGELKLEWLRKFRP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
FANGIPRRHTIARILKAVGPENLQLCLFSWINDIRTASAKPIIAIDGKTLRGASKLGCNT
HHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCEECCHHHHCCHH
LHSVGAFDINNGLALYQEMASGKGKEIETVQSLITMLNINKALITMDALHAQRATLEAIV
HHHCCCEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
ARKGDYVVQVKSNQRTLFQAVKAQYDVAFQDDSQLAQFACSEKGHGRTEQRITFQIPSKL
HCCCCEEEEECCCHHHHHHHHHHHHCEEECCHHHHHHHHHCCCCCCCCCCEEEEECCCCC
SPKLQEKWPSVKTLIAVERHRKIGNKTSIETSFYLSSHDIDPEYIATAVRGHWRIENSLH
CCHHHHHCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHCCEEECCCHH
WVLDVVYREDACRVHEQRTAESLAIVRRMALNLAKLEITQKRSMKSKLHRSLLSDEYREL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE
MIFADVKSI
EHEEEHHCC
>Mature Secondary Structure 
SLFDHLSLVEDTRSHINQRHNLVDVLFLILSAVASGQDGWAEIQQFGELKLEWLRKFRP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
FANGIPRRHTIARILKAVGPENLQLCLFSWINDIRTASAKPIIAIDGKTLRGASKLGCNT
HHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCEECCHHHHCCHH
LHSVGAFDINNGLALYQEMASGKGKEIETVQSLITMLNINKALITMDALHAQRATLEAIV
HHHCCCEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
ARKGDYVVQVKSNQRTLFQAVKAQYDVAFQDDSQLAQFACSEKGHGRTEQRITFQIPSKL
HCCCCEEEEECCCHHHHHHHHHHHHCEEECCHHHHHHHHHCCCCCCCCCCEEEEECCCCC
SPKLQEKWPSVKTLIAVERHRKIGNKTSIETSFYLSSHDIDPEYIATAVRGHWRIENSLH
CCHHHHHCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHCCEEECCCHH
WVLDVVYREDACRVHEQRTAESLAIVRRMALNLAKLEITQKRSMKSKLHRSLLSDEYREL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE
MIFADVKSI
EHEEEHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8387990; 8905232; 9278503 [H]