| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is phsA [H]
Identifier: 160873677
GI number: 160873677
Start: 642334
End: 644628
Strand: Direct
Name: phsA [H]
Synonym: Sbal195_0555
Alternate gene names: 160873677
Gene position: 642334-644628 (Clockwise)
Preceding gene: 160873676
Following gene: 160873678
Centisome position: 12.01
GC content: 51.59
Gene sequence:
>2295_bases ATGGAGGTAACCATGATTGAGCTTAATAGGCGAACCTTTTTAAAGGGAGCAGGAGCGAGCAGCGCCACGTGTGCGCTGGC CAGTCTGCTGCCGGGCAGCTTAGCGGCATTAGAGAATAAGCAGCTAAAGGGCATGGGCAAAGACATTGCCAGTATTTGTG AAATGTGTTCGACCCGTTGCCCGATTTCGGCGCGGGTGATTGAGGGCAAAAACGTCTTCATTAGTGGCAACAAGGCCGCT AAATCCTTTGGCGGTAAAGTGTGTGCCCGTGGCGGCGCAGGCCATAGTTTATTGTACGATCCACAGCGTATCGTTAAACC GTTAAAGCGGGTCGGTGAGCGCGGCGAAGGCAAATGGGCTGAGATCAGTTGGGATGAGGCTTATAAATTAATCGCTGAAA ACCTCAATAAAATCAAAAAAGAACATGGCCCAGAAGCCGTGGCATTCTCGTCAAAATCTGGCTCACAAGAAAAGCATTTG TTTCACCTTGCGACCGCCTTTGGTAGTCCAAATACTTTTACCCACGCGTCGACGTGCCCCGGCGGTTATGAAATTGCCGC TAAGGCCATCTTTGGCACTAAGGTCAAACGAGATTTAAGTAACTCTAAATACATCATTAACTTCGGCCATAACCTGTACG AAGGCATCAATATGTCCGAAACCCGCGGCATGATGGCGGCGCAAATGGACAAAGGTGCCAAGCTGGTGGTCTTCGAGCCA AGATTCTCCGTCGTGGCCGATAAAGCCGATGAATGGTATGCCATTCGCCCCGGAACCGACGTTGCCGTCGCCTTGGCGTT ATGCCATGTATTGATTGAAGATAATCTTTACGACAAGGCATTCGTCGCGCGCTATGTGGAAGGCTTCGAAGCCTTTGCCG CCGAAGTGAAAGCTTATACCCCTGAATGGGCCGAAACCATCTCCGATGTGCCTGCCAAAGACATTCGTCGTATCGCCCAC GAATATGCCGCTAAAGCGCCCCATGCCGTGGTCGATTTTGGTCACAGAGCTACCTTTACCACCGAAGAGTTTGAGATGCG CCGCGCCCTGTACGCCGCCAACGTCTTGATTGGTAATATTGAGCGCAAGGGGGGGATTTATATCGGCCAGAAACCCGGTG ATTACAACAAGCTTGCCGGTGAAGCGGTTGCGCCCGTATTGGCAAAACCTGGCGTGAAAGACATGCCAAAACCAGCAGCG AAACGTATCGATCAAGTGGAAGAACAGTACGCCATGATGTGGACATCGGGCGGTGTTTACCAAACCATTCTCGATGCCAC CTTAAGCGCTGTGCCCTACCAGTTACACGGCTGGGTGATGTCACGCACTAACCCAATGCAAACCATGACAGACAGGGCGC GCGTTGTTGAAGCGATGAAAAAGCTCGACTTTATCGCCGTGTGTGATGTGTATATCAGCGAAACCGCCGCCTATGCTGAC GTGATTTTACCTGAGTCAACTTATCTTGAACGTGATGAAGAAATTGCTGATAAGTCAGGTAAAAATCCCGCCTATTATGT GCGCCAACGTGTGGTTGAAACCTTAGGTGATACTAAGCCTTCTTGGCAGATCTTTAAGGATGTGGGTGTGGCTATGGGCC TTGGCGAGTTCTATCCATGGGAAAACATGGAAACCCTGCAAATGCTGCAGGTGAACCGCGACACTGACCTGCTGCGCCGT ATCAAAAACGAAGGTTTTGTGAGTTTTGGTAAACCGCTCATGCTGCGCGAAGCCAAGATGGTGAATGATTTCACTCAAGC CTATCCAAGCGCACGGCCAATGGATGACGACGGCACTTACGCCAGTGCACTCACCTTTAAAACCCCGAGTGGCAAGATTG AACTCACCTCCGCGAAAGTCGAAGCCATGGCACCGGGCCGTGGGGTGATCAAGTTCCGCGAAGTACATCTTAAAAAAGCA GATGAGCTGTACTTTATCCAAGGCAAAGTGGCGGTGCACACCAATGGCGCCACCCACAATGTGCCTATGCTCGCTAACCT GATGTCGGATAATGCTGTGTGGGTTCACCCCGTCACTGCAGGCAAGTTAGGGATCAGCAATGGCGACCCAATCCGCCTCA CCAGCAGTGTTGGCACAGAAGAAGGCCATGCCTTAGTCACGCCGGGCATTCGCCAAGATACTGTGTTTGCTTACATGGGC TTTGGTTCTAAAAACAAAGAGTTGGTCAGAGCAACAGGCAAAGGTATCCACTGCGGTAACTTACTGCCGCACGTGACGGC TCCTGTGTGTGGCATGACAGTGCACACCACGGGCGTCACGCTGGCAAAGCGCTAA
Upstream 100 bases:
>100_bases CGCTGTTTTAACGCTTTATAACTAAAAAAGTAATCAAATCAGTGAGCAAACCTCTGCTCGATGGCGCCAAAAATGGCGAC TGACGGGTGGGATGAGCGTG
Downstream 100 bases:
>100_bases TCGGAGGCTTAAATGAATAAACGATATGTAATGGTGCACGACGAGAATAAGTGCATCGGCTGCCAAGCTTGTAACGTGGC GTGTCGCAGTGAAAATGGCG
Product: molybdopterin oxidoreductase
Products: Reduced form of N-Oxide compounds [C]
Alternate protein names: NA
Number of amino acids: Translated: 764; Mature: 764
Protein sequence:
>764_residues MEVTMIELNRRTFLKGAGASSATCALASLLPGSLAALENKQLKGMGKDIASICEMCSTRCPISARVIEGKNVFISGNKAA KSFGGKVCARGGAGHSLLYDPQRIVKPLKRVGERGEGKWAEISWDEAYKLIAENLNKIKKEHGPEAVAFSSKSGSQEKHL FHLATAFGSPNTFTHASTCPGGYEIAAKAIFGTKVKRDLSNSKYIINFGHNLYEGINMSETRGMMAAQMDKGAKLVVFEP RFSVVADKADEWYAIRPGTDVAVALALCHVLIEDNLYDKAFVARYVEGFEAFAAEVKAYTPEWAETISDVPAKDIRRIAH EYAAKAPHAVVDFGHRATFTTEEFEMRRALYAANVLIGNIERKGGIYIGQKPGDYNKLAGEAVAPVLAKPGVKDMPKPAA KRIDQVEEQYAMMWTSGGVYQTILDATLSAVPYQLHGWVMSRTNPMQTMTDRARVVEAMKKLDFIAVCDVYISETAAYAD VILPESTYLERDEEIADKSGKNPAYYVRQRVVETLGDTKPSWQIFKDVGVAMGLGEFYPWENMETLQMLQVNRDTDLLRR IKNEGFVSFGKPLMLREAKMVNDFTQAYPSARPMDDDGTYASALTFKTPSGKIELTSAKVEAMAPGRGVIKFREVHLKKA DELYFIQGKVAVHTNGATHNVPMLANLMSDNAVWVHPVTAGKLGISNGDPIRLTSSVGTEEGHALVTPGIRQDTVFAYMG FGSKNKELVRATGKGIHCGNLLPHVTAPVCGMTVHTTGVTLAKR
Sequences:
>Translated_764_residues MEVTMIELNRRTFLKGAGASSATCALASLLPGSLAALENKQLKGMGKDIASICEMCSTRCPISARVIEGKNVFISGNKAA KSFGGKVCARGGAGHSLLYDPQRIVKPLKRVGERGEGKWAEISWDEAYKLIAENLNKIKKEHGPEAVAFSSKSGSQEKHL FHLATAFGSPNTFTHASTCPGGYEIAAKAIFGTKVKRDLSNSKYIINFGHNLYEGINMSETRGMMAAQMDKGAKLVVFEP RFSVVADKADEWYAIRPGTDVAVALALCHVLIEDNLYDKAFVARYVEGFEAFAAEVKAYTPEWAETISDVPAKDIRRIAH EYAAKAPHAVVDFGHRATFTTEEFEMRRALYAANVLIGNIERKGGIYIGQKPGDYNKLAGEAVAPVLAKPGVKDMPKPAA KRIDQVEEQYAMMWTSGGVYQTILDATLSAVPYQLHGWVMSRTNPMQTMTDRARVVEAMKKLDFIAVCDVYISETAAYAD VILPESTYLERDEEIADKSGKNPAYYVRQRVVETLGDTKPSWQIFKDVGVAMGLGEFYPWENMETLQMLQVNRDTDLLRR IKNEGFVSFGKPLMLREAKMVNDFTQAYPSARPMDDDGTYASALTFKTPSGKIELTSAKVEAMAPGRGVIKFREVHLKKA DELYFIQGKVAVHTNGATHNVPMLANLMSDNAVWVHPVTAGKLGISNGDPIRLTSSVGTEEGHALVTPGIRQDTVFAYMG FGSKNKELVRATGKGIHCGNLLPHVTAPVCGMTVHTTGVTLAKR >Mature_764_residues MEVTMIELNRRTFLKGAGASSATCALASLLPGSLAALENKQLKGMGKDIASICEMCSTRCPISARVIEGKNVFISGNKAA KSFGGKVCARGGAGHSLLYDPQRIVKPLKRVGERGEGKWAEISWDEAYKLIAENLNKIKKEHGPEAVAFSSKSGSQEKHL FHLATAFGSPNTFTHASTCPGGYEIAAKAIFGTKVKRDLSNSKYIINFGHNLYEGINMSETRGMMAAQMDKGAKLVVFEP RFSVVADKADEWYAIRPGTDVAVALALCHVLIEDNLYDKAFVARYVEGFEAFAAEVKAYTPEWAETISDVPAKDIRRIAH EYAAKAPHAVVDFGHRATFTTEEFEMRRALYAANVLIGNIERKGGIYIGQKPGDYNKLAGEAVAPVLAKPGVKDMPKPAA KRIDQVEEQYAMMWTSGGVYQTILDATLSAVPYQLHGWVMSRTNPMQTMTDRARVVEAMKKLDFIAVCDVYISETAAYAD VILPESTYLERDEEIADKSGKNPAYYVRQRVVETLGDTKPSWQIFKDVGVAMGLGEFYPWENMETLQMLQVNRDTDLLRR IKNEGFVSFGKPLMLREAKMVNDFTQAYPSARPMDDDGTYASALTFKTPSGKIELTSAKVEAMAPGRGVIKFREVHLKKA DELYFIQGKVAVHTNGATHNVPMLANLMSDNAVWVHPVTAGKLGISNGDPIRLTSSVGTEEGHALVTPGIRQDTVFAYMG FGSKNKELVRATGKGIHCGNLLPHVTAPVCGMTVHTTGVTLAKR
Specific function: Oxidoreductase which produces hydrogen sulfide from thiosulfate (Potential) [H]
COG id: COG0243
COG function: function code C; Anaerobic dehydrogenases, typically selenocysteine-containing
Gene ontology:
Cell location: Cytoplasm Face Of The Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the prokaryotic molybdopterin-containing oxidoreductase family [H]
Homologues:
Organism=Escherichia coli, GI87081797, Length=781, Percent_Identity=25.6081946222791, Blast_Score=183, Evalue=5e-47, Organism=Escherichia coli, GI171474008, Length=775, Percent_Identity=25.4193548387097, Blast_Score=181, Evalue=2e-46, Organism=Escherichia coli, GI1787870, Length=771, Percent_Identity=26.0700389105058, Blast_Score=179, Evalue=4e-46, Organism=Escherichia coli, GI3868721, Length=517, Percent_Identity=28.8201160541586, Blast_Score=172, Evalue=8e-44, Organism=Escherichia coli, GI145693196, Length=672, Percent_Identity=23.6607142857143, Blast_Score=117, Evalue=2e-27, Organism=Escherichia coli, GI1787231, Length=698, Percent_Identity=22.0630372492837, Blast_Score=114, Evalue=3e-26, Organism=Escherichia coli, GI87081994, Length=696, Percent_Identity=23.5632183908046, Blast_Score=103, Evalue=3e-23, Organism=Escherichia coli, GI1788534, Length=583, Percent_Identity=21.6123499142367, Blast_Score=80, Evalue=5e-16, Organism=Escherichia coli, GI3868720, Length=309, Percent_Identity=24.9190938511327, Blast_Score=76, Evalue=7e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009010 - InterPro: IPR006657 - InterPro: IPR006656 - InterPro: IPR006963 - InterPro: IPR006655 - InterPro: IPR006311 [H]
Pfam domain/function: PF04879 Molybdop_Fe4S4; PF00384 Molybdopterin; PF01568 Molydop_binding [H]
EC number: 1.8.99.- [C]
Molecular weight: Translated: 83624; Mature: 83624
Theoretical pI: Translated: 8.59; Mature: 8.59
Prosite motif: PS00551 MOLYBDOPTERIN_PROK_1 ; PS00490 MOLYBDOPTERIN_PROK_2 ; PS00932 MOLYBDOPTERIN_PROK_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEVTMIELNRRTFLKGAGASSATCALASLLPGSLAALENKQLKGMGKDIASICEMCSTRC CEEEEEEECCCEEEECCCCCHHHHHHHHHCCCHHHHHCCHHHHCCCHHHHHHHHHHHCCC PISARVIEGKNVFISGNKAAKSFGGKVCARGGAGHSLLYDPQRIVKPLKRVGERGEGKWA CCEEEEEECCEEEEECCHHHHHCCCCEEECCCCCCCCEECHHHHHHHHHHHCCCCCCCEE EISWDEAYKLIAENLNKIKKEHGPEAVAFSSKSGSQEKHLFHLATAFGSPNTFTHASTCP ECCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHEEEHHHCCCCCCCCCCCCCC GGYEIAAKAIFGTKVKRDLSNSKYIINFGHNLYEGINMSETRGMMAAQMDKGAKLVVFEP CCHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHCCCCHHHCCHHHHHHCCCCEEEEECC RFSVVADKADEWYAIRPGTDVAVALALCHVLIEDNLYDKAFVARYVEGFEAFAAEVKAYT CCCEEECCCCCEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC PEWAETISDVPAKDIRRIAHEYAAKAPHAVVDFGHRATFTTEEFEMRRALYAANVLIGNI CHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHEECE ERKGGIYIGQKPGDYNKLAGEAVAPVLAKPGVKDMPKPAAKRIDQVEEQYAMMWTSGGVY ECCCCEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHH QTILDATLSAVPYQLHGWVMSRTNPMQTMTDRARVVEAMKKLDFIAVCDVYISETAAYAD HHHHHHHHHHCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHH VILPESTYLERDEEIADKSGKNPAYYVRQRVVETLGDTKPSWQIFKDVGVAMGLGEFYPW EECCCCHHHCCCHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCC ENMETLQMLQVNRDTDLLRRIKNEGFVSFGKPLMLREAKMVNDFTQAYPSARPMDDDGTY CCCCHHHHHHCCCCHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCE ASALTFKTPSGKIELTSAKVEAMAPGRGVIKFREVHLKKADELYFIQGKVAVHTNGATHN EEEEEEECCCCCEEEEECEEEEECCCCCCEEEHHHHHCCCCCEEEEEEEEEEEECCCCCC VPMLANLMSDNAVWVHPVTAGKLGISNGDPIRLTSSVGTEEGHALVTPGIRQDTVFAYMG CHHHHHHHCCCCEEEEEECCCCEECCCCCCEEEEECCCCCCCCEEECCCCCCCEEEEEEC FGSKNKELVRATGKGIHCGNLLPHVTAPVCGMTVHTTGVTLAKR CCCCCCHHHHHCCCCCCCCCCCCHHHCCCCCEEEEECCEEEECC >Mature Secondary Structure MEVTMIELNRRTFLKGAGASSATCALASLLPGSLAALENKQLKGMGKDIASICEMCSTRC CEEEEEEECCCEEEECCCCCHHHHHHHHHCCCHHHHHCCHHHHCCCHHHHHHHHHHHCCC PISARVIEGKNVFISGNKAAKSFGGKVCARGGAGHSLLYDPQRIVKPLKRVGERGEGKWA CCEEEEEECCEEEEECCHHHHHCCCCEEECCCCCCCCEECHHHHHHHHHHHCCCCCCCEE EISWDEAYKLIAENLNKIKKEHGPEAVAFSSKSGSQEKHLFHLATAFGSPNTFTHASTCP ECCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHEEEHHHCCCCCCCCCCCCCC GGYEIAAKAIFGTKVKRDLSNSKYIINFGHNLYEGINMSETRGMMAAQMDKGAKLVVFEP CCHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHCCCCHHHCCHHHHHHCCCCEEEEECC RFSVVADKADEWYAIRPGTDVAVALALCHVLIEDNLYDKAFVARYVEGFEAFAAEVKAYT CCCEEECCCCCEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC PEWAETISDVPAKDIRRIAHEYAAKAPHAVVDFGHRATFTTEEFEMRRALYAANVLIGNI CHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHEECE ERKGGIYIGQKPGDYNKLAGEAVAPVLAKPGVKDMPKPAAKRIDQVEEQYAMMWTSGGVY ECCCCEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHH QTILDATLSAVPYQLHGWVMSRTNPMQTMTDRARVVEAMKKLDFIAVCDVYISETAAYAD HHHHHHHHHHCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHH VILPESTYLERDEEIADKSGKNPAYYVRQRVVETLGDTKPSWQIFKDVGVAMGLGEFYPW EECCCCHHHCCCHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCC ENMETLQMLQVNRDTDLLRRIKNEGFVSFGKPLMLREAKMVNDFTQAYPSARPMDDDGTY CCCCHHHHHHCCCCHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCE ASALTFKTPSGKIELTSAKVEAMAPGRGVIKFREVHLKKADELYFIQGKVAVHTNGATHN EEEEEEECCCCCEEEEECEEEEECCCCCCEEEHHHHHCCCCCEEEEEEEEEEEECCCCCC VPMLANLMSDNAVWVHPVTAGKLGISNGDPIRLTSSVGTEEGHALVTPGIRQDTVFAYMG CHHHHHHHCCCCEEEEEECCCCEECCCCCCEEEEECCCCCCCCEEECCCCCCCEEEEEEC FGSKNKELVRATGKGIHCGNLLPHVTAPVCGMTVHTTGVTLAKR CCCCCCHHHHHCCCCCCCCCCCCHHHCCCCCEEEEECCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: May Bind 4Fe-4S Cluster. [C]
Metal ions: Fe; Mo [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: N-Oxide; Sulfoxide Compounds Including Trimethylamine N-Oxide. [C]
Specific reaction: Reduces Various N-Oxide And Sulfoxide Compounds Including Trimethylamine N-Oxide. [C]
General reaction: Oxidoreductases [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7751291; 11677609; 7737516 [H]