Definition Shewanella baltica OS195 chromosome, complete genome.
Accession NC_009997
Length 5,347,283

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The map label for this gene is 160873656

Identifier: 160873656

GI number: 160873656

Start: 617040

End: 619181

Strand: Reverse

Name: 160873656

Synonym: Sbal195_0534

Alternate gene names: NA

Gene position: 619181-617040 (Counterclockwise)

Preceding gene: 160873657

Following gene: 160873654

Centisome position: 11.58

GC content: 49.95

Gene sequence:

>2142_bases
ATGGAAGACAATAAGATGGCTGCAAATTCTGCGTATTTATCTCACCCGTTTAAAACTTCAGTAATTTCCTCATCCCTCGC
AATCGCCATGGGCTTATCGTTAGCACCGCAGGCAATGGCCGATGACAGCGAGTTAGCCAATATTGAACGCTTAGAAGTCC
ACGGCCAACAGACCGAAAACCGCAACACGCTAGGTTCGGCTGAAAACCTGCTGAAAGGACAAGGAGTAGATTTCTCCGAA
GCGGGTGGCGTATCAGCTCTGCCTATTCTCAATGGCATGATGGGCGATCGCATCAAAGTGTTAGTTGATGGTGCGGACAT
TACCGCTTCCTGCGCCAACCAAATGAATCCACCGCTGTCCTATATTTCCGCCAATCAAGTCACCACAGCCGAAGTGATTG
CGGGTGTATCGCCAGTCAGCGCGGGCGGCGACAATATCGCGGGGGTGATCAAAGTCAGCAGCCTTAATCCTAAATTTGGC
GAAAGCGATAGCATCAAGTGGAATAGCGGCGATATCTCAACGGGATACCGCAGCGTGAGTGATACCTTGCTACTGGGCAC
CAATGCCACAGTTGCCAGCAACAATATCAGCCTAAGCTATCAAGGCGCCTATGAAGATGCCAACAGCTATAAAGATGGCA
ATGGCGATAAAGTCATCGATACCCTGTACCGCGCACAAAACCACGCATTGACCGCCGCATGGCGCGATGAGACTCAACAA
GTCGCCATCAAACTGACCCATCAGAATATTCCATTTCAAGGTTTTGCTAACCAATACATGGATATGACAGATAACAAGAG
TTACGGTGCCCTCGCCCGTTATCAACTTAAACTCGACGATGACGGTGAGTTCAGTGCCCAATTCAATTGGCACGGCGTGA
AGCACGAGATGGGCTTTTTTACCCCAGAAAAAACCGGCAAGATGCCGATGAACACTGAAGGTGATGACTACAGCTATCAA
CTGCACTGGCGCTTGCCAATGGGTGATGACAGCACCTTACTGGTCGGCCAAGAATTCTATAGCTACCAGCTCGACGATGT
GTGGCCTGCGGTGCCAGGCACTATGATGGCGCCGAATGATTACATCAACATCAACGATGGCGAACGTCGCCGCGCCGCCG
TTTATGGCGAATGGCAGCAAGATTTGAGCTCTAGCTGGTGGTTATCGGCGGGTGTTCGCTTTGAGTATGTCACCACCAAT
ACTGGTGAAGTCCAAGCCTATAGCAACATGCCAATGATGGGCATGCCGAATATGGATGCCGCTGCGGCGCAGGCCTTTAA
TGCGATGGACAGAGAGCGTAATGATGATCTGATCGACGCCACTTTACTGGCTCGCTATCAATTATCGGCCAATCAACAAC
TTGAGTTTGGCCTTGCCCGCAAGAATCGTGCCCCCAATCTATACGAACGTTACAGCTGGGGCCGCGGCACTATGGCAACC
ACTATGATAGGTTGGTATGGCGATGGTAATGGTTATGTGGGTAATCCAGATCTAAAGCCAGAAACTGCCCACACCCTGAG
CGCAGCCTACAAATATAACGGTGATAGCTGGCAAGTCTCGACCACAGCTTGGTACACAGCGGTGACTGACTATATCGATG
CCGAAGTGATTGGTAGCTTCAATCGCACTAGCTCAGCTGATGGCAAACGCAATATTCTTCAATTCACTAACTTAGATGCC
AATCTCTATGGCGCACGCTTTAATGCGCTCTATCAGTTTGCTGAAACCAGCACAGGTAAATGGCAAGTGTTAGGCAAAGT
AAATTTGACCCGTGGTGAGCGAGATGAAGGCAATGAGCCTTTATATCAAATCAAGCCGCTGCAAACCGAGCTGGCACTGC
AACATCAACTCGGTAACTGGGAAAACAGTCTTTCATGGCAATGGGTTGCGACCAAAGATCGCGTGGATGACCGCCGCCTT
GAAAATGAAACCGATAGCTACTCCTTACTTAACTTAAACAGCAGCATGAAATGGCAGGATCTGACTGTCACCTTCGCCGT
GAATAACCTATTAGACAGCTATTATGAGCTGCCGCTGGGCGGTGTGAGTGTGGCGGAATTTAAGGCCGATAACACCAATG
GCTTTAACCAGATTGCCGGTGCAGGCCGCTCGTTCGAACTCAGCGCAAGCTATGCGTTTTAA

Upstream 100 bases:

>100_bases
TCAATTCTGTTTTTAACCCGCTTTGTTGCCCTCTGCGACAATATGCCGCACCTGTCACTCTTAGATGCTCTTTATAATGC
AGCGCAATTAATCCAAGTGA

Downstream 100 bases:

>100_bases
AGACATGGATTTGTGATGATTCCGCTTATTAGGGCGAATAGCCCTAATAAGCGCGTTAAACAAAAAGGGCAAGCAGATTA
AGTGATTAATCGCTTGCCCT

Product: TonB-dependent receptor

Products: NA

Alternate protein names: NB-Dependent Copper Receptor; NB Dependent Receptor; NB-Dependent Receptor Protein; Outer Membrane Receptor Protein; Outer Membrane Protein C; NB-Dependent Receptor Domain Protein; Outer Membrane Protein; NB-Dependent Receptor Plug; NB-Dependent Outer Membrane Receptor; Outer Membrane Insertion C-Terminal Signal; IMP Dehydrogenase/GMP Reductase; Outer Membrane Protein NosA; NB-Dependent Copper Receptor Protein; Outer Membrane Copper Receptor; Iron Complex Outermembrane Recepter Protein; Nb-Dependent Receptor; NB-Dependent Receptor Domain-Containing Protein

Number of amino acids: Translated: 713; Mature: 713

Protein sequence:

>713_residues
MEDNKMAANSAYLSHPFKTSVISSSLAIAMGLSLAPQAMADDSELANIERLEVHGQQTENRNTLGSAENLLKGQGVDFSE
AGGVSALPILNGMMGDRIKVLVDGADITASCANQMNPPLSYISANQVTTAEVIAGVSPVSAGGDNIAGVIKVSSLNPKFG
ESDSIKWNSGDISTGYRSVSDTLLLGTNATVASNNISLSYQGAYEDANSYKDGNGDKVIDTLYRAQNHALTAAWRDETQQ
VAIKLTHQNIPFQGFANQYMDMTDNKSYGALARYQLKLDDDGEFSAQFNWHGVKHEMGFFTPEKTGKMPMNTEGDDYSYQ
LHWRLPMGDDSTLLVGQEFYSYQLDDVWPAVPGTMMAPNDYININDGERRRAAVYGEWQQDLSSSWWLSAGVRFEYVTTN
TGEVQAYSNMPMMGMPNMDAAAAQAFNAMDRERNDDLIDATLLARYQLSANQQLEFGLARKNRAPNLYERYSWGRGTMAT
TMIGWYGDGNGYVGNPDLKPETAHTLSAAYKYNGDSWQVSTTAWYTAVTDYIDAEVIGSFNRTSSADGKRNILQFTNLDA
NLYGARFNALYQFAETSTGKWQVLGKVNLTRGERDEGNEPLYQIKPLQTELALQHQLGNWENSLSWQWVATKDRVDDRRL
ENETDSYSLLNLNSSMKWQDLTVTFAVNNLLDSYYELPLGGVSVAEFKADNTNGFNQIAGAGRSFELSASYAF

Sequences:

>Translated_713_residues
MEDNKMAANSAYLSHPFKTSVISSSLAIAMGLSLAPQAMADDSELANIERLEVHGQQTENRNTLGSAENLLKGQGVDFSE
AGGVSALPILNGMMGDRIKVLVDGADITASCANQMNPPLSYISANQVTTAEVIAGVSPVSAGGDNIAGVIKVSSLNPKFG
ESDSIKWNSGDISTGYRSVSDTLLLGTNATVASNNISLSYQGAYEDANSYKDGNGDKVIDTLYRAQNHALTAAWRDETQQ
VAIKLTHQNIPFQGFANQYMDMTDNKSYGALARYQLKLDDDGEFSAQFNWHGVKHEMGFFTPEKTGKMPMNTEGDDYSYQ
LHWRLPMGDDSTLLVGQEFYSYQLDDVWPAVPGTMMAPNDYININDGERRRAAVYGEWQQDLSSSWWLSAGVRFEYVTTN
TGEVQAYSNMPMMGMPNMDAAAAQAFNAMDRERNDDLIDATLLARYQLSANQQLEFGLARKNRAPNLYERYSWGRGTMAT
TMIGWYGDGNGYVGNPDLKPETAHTLSAAYKYNGDSWQVSTTAWYTAVTDYIDAEVIGSFNRTSSADGKRNILQFTNLDA
NLYGARFNALYQFAETSTGKWQVLGKVNLTRGERDEGNEPLYQIKPLQTELALQHQLGNWENSLSWQWVATKDRVDDRRL
ENETDSYSLLNLNSSMKWQDLTVTFAVNNLLDSYYELPLGGVSVAEFKADNTNGFNQIAGAGRSFELSASYAF
>Mature_713_residues
MEDNKMAANSAYLSHPFKTSVISSSLAIAMGLSLAPQAMADDSELANIERLEVHGQQTENRNTLGSAENLLKGQGVDFSE
AGGVSALPILNGMMGDRIKVLVDGADITASCANQMNPPLSYISANQVTTAEVIAGVSPVSAGGDNIAGVIKVSSLNPKFG
ESDSIKWNSGDISTGYRSVSDTLLLGTNATVASNNISLSYQGAYEDANSYKDGNGDKVIDTLYRAQNHALTAAWRDETQQ
VAIKLTHQNIPFQGFANQYMDMTDNKSYGALARYQLKLDDDGEFSAQFNWHGVKHEMGFFTPEKTGKMPMNTEGDDYSYQ
LHWRLPMGDDSTLLVGQEFYSYQLDDVWPAVPGTMMAPNDYININDGERRRAAVYGEWQQDLSSSWWLSAGVRFEYVTTN
TGEVQAYSNMPMMGMPNMDAAAAQAFNAMDRERNDDLIDATLLARYQLSANQQLEFGLARKNRAPNLYERYSWGRGTMAT
TMIGWYGDGNGYVGNPDLKPETAHTLSAAYKYNGDSWQVSTTAWYTAVTDYIDAEVIGSFNRTSSADGKRNILQFTNLDA
NLYGARFNALYQFAETSTGKWQVLGKVNLTRGERDEGNEPLYQIKPLQTELALQHQLGNWENSLSWQWVATKDRVDDRRL
ENETDSYSLLNLNSSMKWQDLTVTFAVNNLLDSYYELPLGGVSVAEFKADNTNGFNQIAGAGRSFELSASYAF

Specific function: Unknown

COG id: COG1629

COG function: function code P; Outer membrane receptor proteins, mostly Fe transport

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 78730; Mature: 78730

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: PS01156 TONB_DEPENDENT_REC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEDNKMAANSAYLSHPFKTSVISSSLAIAMGLSLAPQAMADDSELANIERLEVHGQQTEN
CCCCCCCCCCHHHCCCCHHHHHHHHHHHHHCCCCCCHHHCCCHHHCCEEEEEECCCCCCC
RNTLGSAENLLKGQGVDFSEAGGVSALPILNGMMGDRIKVLVDGADITASCANQMNPPLS
CCCCCCHHHHHHCCCCCHHHCCCEEEHHHHHCCCCCEEEEEEECCCCHHHHHHCCCCCHH
YISANQVTTAEVIAGVSPVSAGGDNIAGVIKVSSLNPKFGESDSIKWNSGDISTGYRSVS
EEECCCCCHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEECCCCCCCCCCCCC
DTLLLGTNATVASNNISLSYQGAYEDANSYKDGNGDKVIDTLYRAQNHALTAAWRDETQQ
CEEEEECCCEEECCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCEE
VAIKLTHQNIPFQGFANQYMDMTDNKSYGALARYQLKLDDDGEFSAQFNWHGVKHEMGFF
EEEEEEECCCCCCHHHHHHCCCCCCCCCCCEEEEEEEECCCCCEEEEEEECCCCHHCCCC
TPEKTGKMPMNTEGDDYSYQLHWRLPMGDDSTLLVGQEFYSYQLDDVWPAVPGTMMAPND
CCCCCCCCCCCCCCCCEEEEEEEEECCCCCCEEEEECHHHEEECCCCCCCCCCCEECCCC
YININDGERRRAAVYGEWQQDLSSSWWLSAGVRFEYVTTNTGEVQAYSNMPMMGMPNMDA
EEECCCCCCEEEEEECHHHHHCCCCEEEECCCEEEEEECCCCCEEEECCCCCCCCCCCCH
AAAQAFNAMDRERNDDLIDATLLARYQLSANQQLEFGLARKNRAPNLYERYSWGRGTMAT
HHHHHHHHHHCCCCCCHHHHHHHEEEECCCCCEEEEEHHHCCCCCCHHHHHCCCCCCEEE
TMIGWYGDGNGYVGNPDLKPETAHTLSAAYKYNGDSWQVSTTAWYTAVTDYIDAEVIGSF
EEEEEEECCCCCCCCCCCCCCHHHHEEEEEEECCCCEEEEEEEEEHHHHHHHCHHHHCCC
NRTSSADGKRNILQFTNLDANLYGARFNALYQFAETSTGKWQVLGKVNLTRGERDEGNEP
CCCCCCCCCCCEEEEECCCCEEEHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCC
LYQIKPLQTELALQHQLGNWENSLSWQWVATKDRVDDRRLENETDSYSLLNLNSSMKWQD
EEEEECCHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHCCCCCCEEEEECCCCCCEEE
LTVTFAVNNLLDSYYELPLGGVSVAEFKADNTNGFNQIAGAGRSFELSASYAF
EEEEEEHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHCCCCCEEEEEECCC
>Mature Secondary Structure
MEDNKMAANSAYLSHPFKTSVISSSLAIAMGLSLAPQAMADDSELANIERLEVHGQQTEN
CCCCCCCCCCHHHCCCCHHHHHHHHHHHHHCCCCCCHHHCCCHHHCCEEEEEECCCCCCC
RNTLGSAENLLKGQGVDFSEAGGVSALPILNGMMGDRIKVLVDGADITASCANQMNPPLS
CCCCCCHHHHHHCCCCCHHHCCCEEEHHHHHCCCCCEEEEEEECCCCHHHHHHCCCCCHH
YISANQVTTAEVIAGVSPVSAGGDNIAGVIKVSSLNPKFGESDSIKWNSGDISTGYRSVS
EEECCCCCHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEECCCCCCCCCCCCC
DTLLLGTNATVASNNISLSYQGAYEDANSYKDGNGDKVIDTLYRAQNHALTAAWRDETQQ
CEEEEECCCEEECCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCEE
VAIKLTHQNIPFQGFANQYMDMTDNKSYGALARYQLKLDDDGEFSAQFNWHGVKHEMGFF
EEEEEEECCCCCCHHHHHHCCCCCCCCCCCEEEEEEEECCCCCEEEEEEECCCCHHCCCC
TPEKTGKMPMNTEGDDYSYQLHWRLPMGDDSTLLVGQEFYSYQLDDVWPAVPGTMMAPND
CCCCCCCCCCCCCCCCEEEEEEEEECCCCCCEEEEECHHHEEECCCCCCCCCCCEECCCC
YININDGERRRAAVYGEWQQDLSSSWWLSAGVRFEYVTTNTGEVQAYSNMPMMGMPNMDA
EEECCCCCCEEEEEECHHHHHCCCCEEEECCCEEEEEECCCCCEEEECCCCCCCCCCCCH
AAAQAFNAMDRERNDDLIDATLLARYQLSANQQLEFGLARKNRAPNLYERYSWGRGTMAT
HHHHHHHHHHCCCCCCHHHHHHHEEEECCCCCEEEEEHHHCCCCCCHHHHHCCCCCCEEE
TMIGWYGDGNGYVGNPDLKPETAHTLSAAYKYNGDSWQVSTTAWYTAVTDYIDAEVIGSF
EEEEEEECCCCCCCCCCCCCCHHHHEEEEEEECCCCEEEEEEEEEHHHHHHHCHHHHCCC
NRTSSADGKRNILQFTNLDANLYGARFNALYQFAETSTGKWQVLGKVNLTRGERDEGNEP
CCCCCCCCCCCEEEEECCCCEEEHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCC
LYQIKPLQTELALQHQLGNWENSLSWQWVATKDRVDDRRLENETDSYSLLNLNSSMKWQD
EEEEECCHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHCCCCCCEEEEECCCCCCEEE
LTVTFAVNNLLDSYYELPLGGVSVAEFKADNTNGFNQIAGAGRSFELSASYAF
EEEEEEHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA