| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160873653
Identifier: 160873653
GI number: 160873653
Start: 611965
End: 614469
Strand: Reverse
Name: 160873653
Synonym: Sbal195_0531
Alternate gene names: NA
Gene position: 614469-611965 (Counterclockwise)
Preceding gene: 160873654
Following gene: 160873618
Centisome position: 11.49
GC content: 48.86
Gene sequence:
>2505_bases ATGCGACTTAGCAAAACGTTATCGGTATTTTCTTGGGCATTACTGGGCGCATTAGCGCTCAGTGGTTGTAACGGCGCCGC AGATGGCACCGACACTGACGGTACAACAGACAGCTACAGCTTAACACTGGGCTATAAAACTGTAGTCAACGGCAAGTGTG CCGATACAACCACTAACTTAAGCTTTGCTTCCGATGCTAGTTTTTGTGCCGTCGCCACCTTAAAAAAAGGCTCGAGTAAA CTCAGCGGTCAGCTCGTTAGCTTCACTGCCACTTTAGGCACTGTTGCGCCTGCAACTAAACTCACCAATGCAGATGGCGT TGCCGAAGCCATCATTTCTAACCCTGTGTTAACCGAAGAAGCCGGTACAGCAACGGTTAGCTATACGCCGTCAGATGCCG ACGCATTAACTGCGAGTCGTAACTACGAGTTCGTTGGTTCAGGCAGTGGCAGCACAATTGAAACGCCTAAACTCAGCGCC AGTATTTTAAACAGCGCAGCCTTAGTGACTCGCTTTAAAGTCGATGAGTCGGTTCAACTGCAAGCCATATTGCTCGATAG CGAAAGCAAAGGTATCGAAGGCGCGAAAGTGACGTTCACCGCAGGTTCTGCAGCGCTGAATCCTGCAAGTGCGCTGACCA ACACACAAGGTATTGCGCAGGTGACCTATACGCCAAGTGCAACTGAATTAGGGGCAAACTCCCTAACAGTAACAGTGGAC TATCAAGGTCAATCGTTGCAAACCAGCAGTCTGTATGAAGTCTTGAGTAAAGATGCGGTCAATCAAGAAGGTACGCTGAA ACTCGGCTCATTCAATGGCGCTATTTTTACCGAAGGCAAATTAGCGAGTACCTTAACGGCCGATGCCAATAGCGCATATA CAATCAGCGCAGGTGGCAGCTTTGGGGTCACCGCAAGTTTAGTCTTAGAGGCCAATGACGGCACTATTACCCGAGTCCAA ACACCCTCTTCCATCAGCTTTAGCTCAGATTGCACCAGCAGTAATAGTGCGACACTCGATACCCCAGTTACGACCTTATC GGGTAATGCGAGCTCAACCTTCCAAGACACAAGTTGCAGTGGCAACAGTGAACGTAGCGACCAAATCCTCGCCACGACAG TGGCCGGCAATCAGACGCTAACGGCGAATTTCCCGTTCACACTGCAACGCCAAACGCTTGCCAGCTTAAGTTTTGAGTCG GCCGAACCGGCACAAATTCGCATCAAAGGTGCGGGCGGCACAGGTTCAAGCGAATCCTCTTTAGTCAGTTTCAAAGTCAC CAGCGCTAATGGTCAACCCGCAGCGCAACAGAAAGTCAGCTTTACCTTAGACACTGTGGTTGGCGGTTTAAGTTTTGCCA ATGGCACTGCGAATGCGCAAAGCCTGACTAACTCCCAAGGTATCGCCAGTGTGCGCGTATTATCCGGCACAGTCCCCACA CCCGTGCGCGTGGTCGCTACTGCGGTGGATACTGATACTAAAGAAGTCATCACTAGCCAGTCAGAGCAACTCACAGTCAA TACCGGCTTGCCGCAACAGCTTGGGTTTAGCCTATCAACGACAGTATTCAATCCAGAAGCGGGTGACTTTAATGGTGAAA CCGCAACGATCACCATTCGAGCCTCCGATAGTTTTGGCAATCCAGCACCCGATGATACCGCGGTTAACTTCACCACAGAA GGCGGCCAGATCCCGACATCATGTGTCACTAAAAATGGCACTTGTAGCGTCGTTTGGACATCACAATCAGCACGCGTACC CGATCACCGCATCACGATTCTCGCTTATGCCTTAGGTCACGAAACCTTCTTCGATACCAATGGCAATAACATCTTTGATG ATGCCGATATCAGTAAAGACATCAATGGCACGCCAGTGACTGACTTAGCCTGTTTAACTCGGTCAGGCGTCGCAAAAAAA TGCACCGGTAATGGCATGGACATCGAAGCCTACCTTCCTAGTGGTTTCAGTGATCTAGGTGATGCGTTTAGGGATGACAA TGAAGATGGTATTTGGAATTTAGGTGAAAAGTATTTAAATACTAAAAATAGTGACACCTACCTTTCTGCCGATGGCAAAT TTAACGGTCCACAATGCGAAAGCACACTCTGTGGCAAAGACCAAGCCAATAAAACCTATATCCGCAAAGCTTTAGTAATG AGCATGTCAGGCTCACAGGCCTATATCAGTGTGATGCAAGACGGTGTGTTATTGCCGAGTGTGAATGACATCAAACCTGT GGCCGTTGGTGCTAGTTCTGAGTTTGTAGTATTTGTCCACGACAGTGCGAATCAAATCATGCCTGCTACGACTAGTATCG AACTTTGCGTCGATTGTGCTGGAGCGCCTAAAACCTTCGAGGTTCCTAATACTGTTTATGCGAAAGGCAGTCTAGGTTCG CCGCTGAAATTTACGGCATCGGCCAATGCCAGTGTATCACTGAAAGTCACAACCCCTAAAAATGTGGTCACTGACAACTT AGGTTTCACAGTGCCATCGCTTTAA
Upstream 100 bases:
>100_bases TGGCAAAAGGTCCAGAATCAAAATCATCTAAAGAGCTGTTTAAATATCTACGCAGCGAAATCCAAGACTAATTAACTTCA GCCCCACAAGGATGTTGCTT
Downstream 100 bases:
>100_bases AACTCGATTAAGCAAACTGAAAAGACCCGCGAATGCGGGTCTTTTCAGTTGGACGTTTTATTAGAAAACTATGACAGCTC AATCAAACCCTTGTCAGTTG
Product: Ig domain-containing protein
Products: NA
Alternate protein names: Intimin/Invasin Family Protein; Invasin Domain-Containing Protein; Ig Domain Domain Protein; Lipoprotein
Number of amino acids: Translated: 834; Mature: 834
Protein sequence:
>834_residues MRLSKTLSVFSWALLGALALSGCNGAADGTDTDGTTDSYSLTLGYKTVVNGKCADTTTNLSFASDASFCAVATLKKGSSK LSGQLVSFTATLGTVAPATKLTNADGVAEAIISNPVLTEEAGTATVSYTPSDADALTASRNYEFVGSGSGSTIETPKLSA SILNSAALVTRFKVDESVQLQAILLDSESKGIEGAKVTFTAGSAALNPASALTNTQGIAQVTYTPSATELGANSLTVTVD YQGQSLQTSSLYEVLSKDAVNQEGTLKLGSFNGAIFTEGKLASTLTADANSAYTISAGGSFGVTASLVLEANDGTITRVQ TPSSISFSSDCTSSNSATLDTPVTTLSGNASSTFQDTSCSGNSERSDQILATTVAGNQTLTANFPFTLQRQTLASLSFES AEPAQIRIKGAGGTGSSESSLVSFKVTSANGQPAAQQKVSFTLDTVVGGLSFANGTANAQSLTNSQGIASVRVLSGTVPT PVRVVATAVDTDTKEVITSQSEQLTVNTGLPQQLGFSLSTTVFNPEAGDFNGETATITIRASDSFGNPAPDDTAVNFTTE GGQIPTSCVTKNGTCSVVWTSQSARVPDHRITILAYALGHETFFDTNGNNIFDDADISKDINGTPVTDLACLTRSGVAKK CTGNGMDIEAYLPSGFSDLGDAFRDDNEDGIWNLGEKYLNTKNSDTYLSADGKFNGPQCESTLCGKDQANKTYIRKALVM SMSGSQAYISVMQDGVLLPSVNDIKPVAVGASSEFVVFVHDSANQIMPATTSIELCVDCAGAPKTFEVPNTVYAKGSLGS PLKFTASANASVSLKVTTPKNVVTDNLGFTVPSL
Sequences:
>Translated_834_residues MRLSKTLSVFSWALLGALALSGCNGAADGTDTDGTTDSYSLTLGYKTVVNGKCADTTTNLSFASDASFCAVATLKKGSSK LSGQLVSFTATLGTVAPATKLTNADGVAEAIISNPVLTEEAGTATVSYTPSDADALTASRNYEFVGSGSGSTIETPKLSA SILNSAALVTRFKVDESVQLQAILLDSESKGIEGAKVTFTAGSAALNPASALTNTQGIAQVTYTPSATELGANSLTVTVD YQGQSLQTSSLYEVLSKDAVNQEGTLKLGSFNGAIFTEGKLASTLTADANSAYTISAGGSFGVTASLVLEANDGTITRVQ TPSSISFSSDCTSSNSATLDTPVTTLSGNASSTFQDTSCSGNSERSDQILATTVAGNQTLTANFPFTLQRQTLASLSFES AEPAQIRIKGAGGTGSSESSLVSFKVTSANGQPAAQQKVSFTLDTVVGGLSFANGTANAQSLTNSQGIASVRVLSGTVPT PVRVVATAVDTDTKEVITSQSEQLTVNTGLPQQLGFSLSTTVFNPEAGDFNGETATITIRASDSFGNPAPDDTAVNFTTE GGQIPTSCVTKNGTCSVVWTSQSARVPDHRITILAYALGHETFFDTNGNNIFDDADISKDINGTPVTDLACLTRSGVAKK CTGNGMDIEAYLPSGFSDLGDAFRDDNEDGIWNLGEKYLNTKNSDTYLSADGKFNGPQCESTLCGKDQANKTYIRKALVM SMSGSQAYISVMQDGVLLPSVNDIKPVAVGASSEFVVFVHDSANQIMPATTSIELCVDCAGAPKTFEVPNTVYAKGSLGS PLKFTASANASVSLKVTTPKNVVTDNLGFTVPSL >Mature_834_residues MRLSKTLSVFSWALLGALALSGCNGAADGTDTDGTTDSYSLTLGYKTVVNGKCADTTTNLSFASDASFCAVATLKKGSSK LSGQLVSFTATLGTVAPATKLTNADGVAEAIISNPVLTEEAGTATVSYTPSDADALTASRNYEFVGSGSGSTIETPKLSA SILNSAALVTRFKVDESVQLQAILLDSESKGIEGAKVTFTAGSAALNPASALTNTQGIAQVTYTPSATELGANSLTVTVD YQGQSLQTSSLYEVLSKDAVNQEGTLKLGSFNGAIFTEGKLASTLTADANSAYTISAGGSFGVTASLVLEANDGTITRVQ TPSSISFSSDCTSSNSATLDTPVTTLSGNASSTFQDTSCSGNSERSDQILATTVAGNQTLTANFPFTLQRQTLASLSFES AEPAQIRIKGAGGTGSSESSLVSFKVTSANGQPAAQQKVSFTLDTVVGGLSFANGTANAQSLTNSQGIASVRVLSGTVPT PVRVVATAVDTDTKEVITSQSEQLTVNTGLPQQLGFSLSTTVFNPEAGDFNGETATITIRASDSFGNPAPDDTAVNFTTE GGQIPTSCVTKNGTCSVVWTSQSARVPDHRITILAYALGHETFFDTNGNNIFDDADISKDINGTPVTDLACLTRSGVAKK CTGNGMDIEAYLPSGFSDLGDAFRDDNEDGIWNLGEKYLNTKNSDTYLSADGKFNGPQCESTLCGKDQANKTYIRKALVM SMSGSQAYISVMQDGVLLPSVNDIKPVAVGASSEFVVFVHDSANQIMPATTSIELCVDCAGAPKTFEVPNTVYAKGSLGS PLKFTASANASVSLKVTTPKNVVTDNLGFTVPSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 85932; Mature: 85932
Theoretical pI: Translated: 4.30; Mature: 4.30
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51127 BIG1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLSKTLSVFSWALLGALALSGCNGAADGTDTDGTTDSYSLTLGYKTVVNGKCADTTTNL CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCC SFASDASFCAVATLKKGSSKLSGQLVSFTATLGTVAPATKLTNADGVAEAIISNPVLTEE EECCCCCEEEEEEECCCCCCCCCEEEEEEEHHCCCCCCHHCCCCCHHHHHHHCCCCEECC AGTATVSYTPSDADALTASRNYEFVGSGSGSTIETPKLSASILNSAALVTRFKVDESVQL CCCEEEEECCCCCHHEECCCCEEEEECCCCCEEECCCCHHHHHCCEEEEEEEECCCCEEE QAILLDSESKGIEGAKVTFTAGSAALNPASALTNTQGIAQVTYTPSATELGANSLTVTVD EEEEEECCCCCCCCEEEEEECCCCCCCCHHHHCCCCCEEEEEECCCHHHCCCCEEEEEEE YQGQSLQTSSLYEVLSKDAVNQEGTLKLGSFNGAIFTEGKLASTLTADANSAYTISAGGS ECCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCEEEECCCEEEEEEECCCCEEEEECCCC FGVTASLVLEANDGTITRVQTPSSISFSSDCTSSNSATLDTPVTTLSGNASSTFQDTSCS CCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCEECCCEEEECCCCCCCCCCCCCC GNSERSDQILATTVAGNQTLTANFPFTLQRQTLASLSFESAEPAQIRIKGAGGTGSSESS CCCCCCCEEEEEEECCCEEEEECCCEEECHHHHHHCCCCCCCCEEEEEEECCCCCCCCCE LVSFKVTSANGQPAAQQKVSFTLDTVVGGLSFANGTANAQSLTNSQGIASVRVLSGTVPT EEEEEEECCCCCCCCHHEEEEEEHHHHCCCEECCCCCCHHHHCCCCCCEEEEEEECCCCC PVRVVATAVDTDTKEVITSQSEQLTVNTGLPQQLGFSLSTTVFNPEAGDFNGETATITIR CEEEEEEECCCCHHHHHCCCCCEEEEECCCHHHHCCEEEEEEECCCCCCCCCCEEEEEEE ASDSFGNPAPDDTAVNFTTEGGQIPTSCVTKNGTCSVVWTSQSARVPDHRITILAYALGH ECCCCCCCCCCCCEEEEEECCCCCCHHHCCCCCEEEEEECCCCCCCCCCEEEEEEEEECC ETFFDTNGNNIFDDADISKDINGTPVTDLACLTRSGVAKKCTGNGMDIEAYLPSGFSDLG CEEEECCCCCEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHH DAFRDDNEDGIWNLGEKYLNTKNSDTYLSADGKFNGPQCESTLCGKDQANKTYIRKALVM HHHCCCCCCCCCCCCHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHEE SMSGSQAYISVMQDGVLLPSVNDIKPVAVGASSEFVVFVHDSANQIMPATTSIELCVDCA ECCCCCEEEEEHHCCEECCCCCCCCEEEECCCCCEEEEEECCCCCEECCCCEEEEEEECC GAPKTFEVPNTVYAKGSLGSPLKFTASANASVSLKVTTPKNVVTDNLGFTVPSL CCCCEEECCCEEEECCCCCCCEEEEECCCCEEEEEEECCCCEEECCCCEECCCC >Mature Secondary Structure MRLSKTLSVFSWALLGALALSGCNGAADGTDTDGTTDSYSLTLGYKTVVNGKCADTTTNL CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCC SFASDASFCAVATLKKGSSKLSGQLVSFTATLGTVAPATKLTNADGVAEAIISNPVLTEE EECCCCCEEEEEEECCCCCCCCCEEEEEEEHHCCCCCCHHCCCCCHHHHHHHCCCCEECC AGTATVSYTPSDADALTASRNYEFVGSGSGSTIETPKLSASILNSAALVTRFKVDESVQL CCCEEEEECCCCCHHEECCCCEEEEECCCCCEEECCCCHHHHHCCEEEEEEEECCCCEEE QAILLDSESKGIEGAKVTFTAGSAALNPASALTNTQGIAQVTYTPSATELGANSLTVTVD EEEEEECCCCCCCCEEEEEECCCCCCCCHHHHCCCCCEEEEEECCCHHHCCCCEEEEEEE YQGQSLQTSSLYEVLSKDAVNQEGTLKLGSFNGAIFTEGKLASTLTADANSAYTISAGGS ECCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCEEEECCCEEEEEEECCCCEEEEECCCC FGVTASLVLEANDGTITRVQTPSSISFSSDCTSSNSATLDTPVTTLSGNASSTFQDTSCS CCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCEECCCEEEECCCCCCCCCCCCCC GNSERSDQILATTVAGNQTLTANFPFTLQRQTLASLSFESAEPAQIRIKGAGGTGSSESS CCCCCCCEEEEEEECCCEEEEECCCEEECHHHHHHCCCCCCCCEEEEEEECCCCCCCCCE LVSFKVTSANGQPAAQQKVSFTLDTVVGGLSFANGTANAQSLTNSQGIASVRVLSGTVPT EEEEEEECCCCCCCCHHEEEEEEHHHHCCCEECCCCCCHHHHCCCCCCEEEEEEECCCCC PVRVVATAVDTDTKEVITSQSEQLTVNTGLPQQLGFSLSTTVFNPEAGDFNGETATITIR CEEEEEEECCCCHHHHHCCCCCEEEEECCCHHHHCCEEEEEEECCCCCCCCCCEEEEEEE ASDSFGNPAPDDTAVNFTTEGGQIPTSCVTKNGTCSVVWTSQSARVPDHRITILAYALGH ECCCCCCCCCCCCEEEEEECCCCCCHHHCCCCCEEEEEECCCCCCCCCCEEEEEEEEECC ETFFDTNGNNIFDDADISKDINGTPVTDLACLTRSGVAKKCTGNGMDIEAYLPSGFSDLG CEEEECCCCCEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHH DAFRDDNEDGIWNLGEKYLNTKNSDTYLSADGKFNGPQCESTLCGKDQANKTYIRKALVM HHHCCCCCCCCCCCCHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHEE SMSGSQAYISVMQDGVLLPSVNDIKPVAVGASSEFVVFVHDSANQIMPATTSIELCVDCA ECCCCCEEEEEHHCCEECCCCCCCCEEEECCCCCEEEEEECCCCCEECCCCEEEEEEECC GAPKTFEVPNTVYAKGSLGSPLKFTASANASVSLKVTTPKNVVTDNLGFTVPSL CCCCEEECCCEEEECCCCCCCEEEEECCCCEEEEEEECCCCEEECCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA