| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is mreC [H]
Identifier: 160873641
GI number: 160873641
Start: 594431
End: 595441
Strand: Direct
Name: mreC [H]
Synonym: Sbal195_0519
Alternate gene names: 160873641
Gene position: 594431-595441 (Clockwise)
Preceding gene: 160873640
Following gene: 160873642
Centisome position: 11.12
GC content: 51.73
Gene sequence:
>1011_bases ATGAAGCCAATTTTTGTTCGTGGTATTTCAAACCAATTCCGTCTGACACTGGCAATTATTTTGTCGGTGGCCTTGCTTGT GGCTAATCATCGCCTCGATCCTGTGCGGCAAAACCTATCCTCTGTCTTTAGTCCATTACAGTATTTAGCCAGCGTGCCCG GTGCGGCGCTTGACTGGTCATCTGAAAGTTTTGCCACCCGCAATATGCTGGCGTTGCAAAATAAAGAGCTGCTCAGGCAA CAACTGCTGATGAGTGAACGCTTACAGCGTTTCGAACACTTACGCCAAGAAAATGAGCGTTTGCGTGCACTGTTAGGCTC ACCCGCCTATCTGGATTCGCGCAAGATGGTGGCCGAAGTGCTAGAGGTCGCCAGCGATCCTTTCCATCATTACGTGGTGC TGAATCATGGTTCCCGTAGCGGGGTATTTGTCGGTCAGCCCGTGGTGGATGCACAAGGTGTTGTCGGCCAAGTGGTGCAG GTCAGTGAAATGACCAGCCGGGTGTTATTGCTCTCCGATGTATCGCACGGATTACCTGTGCGTATTACCCGTAATGATGT GCGCCTTGTCGCCAATGGTACGGGTGAGCTTGATGAGATAGAACTGCGCCATGTGGCCAAGAGTACTGACATTCGTGTCG GCGATTTATTGGTGACTTCAGGCTTAGGCAATCGTTTCCCCGAAGGTTATCCCGTTGCGCGAGTCATGGAGGTTTTGACT GAAGATGGTCAAAGTTACGCTCGAGTCACGGCCCAACCGTTAGCCGCTTTAGATCGTATTCGTTATGTGTTGTTGATTTG GCCGTCTCCCGATTCGGGTGTGACCTTGCCTAATCAGCCTACAGTCCCCGCTGCGGATCATTCGCTTATTGAAAACTCAT CAAAAATTGGCAGTGCGAGTCCAGCGGAAGGTACATCTGCAGACACGACTAAGCCTGTGACTACACCCGCAGCCACTGTG GCCAAACCGGCAACGGAAACCACTCCTCCAGCGACTGAGGTGCACCAATGA
Upstream 100 bases:
>100_bases AAGCCCTCGAAATGATTGATATGCACGGCGGCGATCTGTTCTCCGAAGAAACCTAATTTAACTTCGGTATAGGGCGGTTA ATCACCGCCTTAGCTTTCCT
Downstream 100 bases:
>100_bases GTTTTCAAGCAGCCAATGGGCGCTTCATTGTTTGGGTGACATTATTTATCGGCGTGATCAGCCAGATCATGCCTTTGCCG AGTGTGGTCGATGCTTGGCG
Product: rod shape-determining protein MreC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 336; Mature: 336
Protein sequence:
>336_residues MKPIFVRGISNQFRLTLAIILSVALLVANHRLDPVRQNLSSVFSPLQYLASVPGAALDWSSESFATRNMLALQNKELLRQ QLLMSERLQRFEHLRQENERLRALLGSPAYLDSRKMVAEVLEVASDPFHHYVVLNHGSRSGVFVGQPVVDAQGVVGQVVQ VSEMTSRVLLLSDVSHGLPVRITRNDVRLVANGTGELDEIELRHVAKSTDIRVGDLLVTSGLGNRFPEGYPVARVMEVLT EDGQSYARVTAQPLAALDRIRYVLLIWPSPDSGVTLPNQPTVPAADHSLIENSSKIGSASPAEGTSADTTKPVTTPAATV AKPATETTPPATEVHQ
Sequences:
>Translated_336_residues MKPIFVRGISNQFRLTLAIILSVALLVANHRLDPVRQNLSSVFSPLQYLASVPGAALDWSSESFATRNMLALQNKELLRQ QLLMSERLQRFEHLRQENERLRALLGSPAYLDSRKMVAEVLEVASDPFHHYVVLNHGSRSGVFVGQPVVDAQGVVGQVVQ VSEMTSRVLLLSDVSHGLPVRITRNDVRLVANGTGELDEIELRHVAKSTDIRVGDLLVTSGLGNRFPEGYPVARVMEVLT EDGQSYARVTAQPLAALDRIRYVLLIWPSPDSGVTLPNQPTVPAADHSLIENSSKIGSASPAEGTSADTTKPVTTPAATV AKPATETTPPATEVHQ >Mature_336_residues MKPIFVRGISNQFRLTLAIILSVALLVANHRLDPVRQNLSSVFSPLQYLASVPGAALDWSSESFATRNMLALQNKELLRQ QLLMSERLQRFEHLRQENERLRALLGSPAYLDSRKMVAEVLEVASDPFHHYVVLNHGSRSGVFVGQPVVDAQGVVGQVVQ VSEMTSRVLLLSDVSHGLPVRITRNDVRLVANGTGELDEIELRHVAKSTDIRVGDLLVTSGLGNRFPEGYPVARVMEVLT EDGQSYARVTAQPLAALDRIRYVLLIWPSPDSGVTLPNQPTVPAADHSLIENSSKIGSASPAEGTSADTTKPVTTPAATV AKPATETTPPATEVHQ
Specific function: Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins [H]
COG id: COG1792
COG function: function code M; Cell shape-determining protein
Gene ontology:
Cell location: Inner Membrane-Anchored [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mreC family [H]
Homologues:
Organism=Escherichia coli, GI1789648, Length=330, Percent_Identity=41.2121212121212, Blast_Score=221, Evalue=5e-59,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007221 - InterPro: IPR005223 [H]
Pfam domain/function: PF04085 MreC [H]
EC number: NA
Molecular weight: Translated: 36553; Mature: 36553
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPIFVRGISNQFRLTLAIILSVALLVANHRLDPVRQNLSSVFSPLQYLASVPGAALDWS CCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEECCC SESFATRNMLALQNKELLRQQLLMSERLQRFEHLRQENERLRALLGSPAYLDSRKMVAEV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH LEVASDPFHHYVVLNHGSRSGVFVGQPVVDAQGVVGQVVQVSEMTSRVLLLSDVSHGLPV HHHHCCCCEEEEEEECCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHEEEEECCCCCCCE RITRNDVRLVANGTGELDEIELRHVAKSTDIRVGDLLVTSGLGNRFPEGYPVARVMEVLT EEECCCEEEEECCCCCCHHHHHHHHHHCCCCEEHHEEEECCCCCCCCCCCCHHHHHHHHH EDGQSYARVTAQPLAALDRIRYVLLIWPSPDSGVTLPNQPTVPAADHSLIENSSKIGSAS HCCHHHHHHHHHHHHHHHHCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCC PAEGTSADTTKPVTTPAATVAKPATETTPPATEVHQ CCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MKPIFVRGISNQFRLTLAIILSVALLVANHRLDPVRQNLSSVFSPLQYLASVPGAALDWS CCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEECCC SESFATRNMLALQNKELLRQQLLMSERLQRFEHLRQENERLRALLGSPAYLDSRKMVAEV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH LEVASDPFHHYVVLNHGSRSGVFVGQPVVDAQGVVGQVVQVSEMTSRVLLLSDVSHGLPV HHHHCCCCEEEEEEECCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHEEEEECCCCCCCE RITRNDVRLVANGTGELDEIELRHVAKSTDIRVGDLLVTSGLGNRFPEGYPVARVMEVLT EEECCCEEEEECCCCCCHHHHHHHHHHCCCCEEHHEEEECCCCCCCCCCCCHHHHHHHHH EDGQSYARVTAQPLAALDRIRYVLLIWPSPDSGVTLPNQPTVPAADHSLIENSSKIGSAS HCCHHHHHHHHHHHHHHHHCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCC PAEGTSADTTKPVTTPAATVAKPATETTPPATEVHQ CCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]