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The map label for this gene is tapC [H]

Identifier: 160873631

GI number: 160873631

Start: 582712

End: 583932

Strand: Direct

Name: tapC [H]

Synonym: Sbal195_0509

Alternate gene names: 160873631

Gene position: 582712-583932 (Clockwise)

Preceding gene: 160873630

Following gene: 160873632

Centisome position: 10.9

GC content: 48.65

Gene sequence:

>1221_bases
ATGCCGATTTATCAATACCGTGGACGCAGTGGTCAAGGTCAGTCTGTTACGGGACAATTGGATGCCGCGTCGGAAAGTGC
TGCCGCTGACATGCTATTGGCGCGGGGGATTATTCCCCTCGAAGTCAAAGTCGCTAAAGTGGTTAAGTCATTCTCACTGG
CCCAGCTGTTTGGTGGAAAAGTTGCGTTAGAAGAATTACAGATCTTTACTCGGCAAATGTATTCTCTGACTCGTTCTGGC
ATCCCGATTTTACGGGCGATTGCGGGGTTGTCTGAAACGGCACATTCCCAGCGGATGAAAGATGCGCTCAACGATATTTC
TGAGCAGCTCACCGCAGGACGGCCCTTGTCATCATCCATGAATCAACATCCCGATGTATTTGATTCCTTGTTTGTTTCTA
TGGTGCACGTGGGAGAAAACACCGGTAAGTTAGAGGATGCCTTTATTCAGCTTTCGGGTTATATCGAGCGTGAGCAGGAA
ACGCGGCGACGAATTAAATCGGCCATGCGTTATCCCATGTTTGTATTGATTTCGATAGCACTCGCTATGGTGATCCTCAA
TATCATGGTGATCCCTAAGTTCGCCGAGATGTTTTCCCGCTTTGGCGCTGACTTACCTTGGGCGACAAAAGTGTTGATAG
GTACATCGAATCTGTTTGTGAATTATTGGGCGCTGATGTTGGTGGCGCTGATTGGCACTATCATTGGCATCCGTTATTGG
CACCATACGGAAAAGGGCGAGAAACAGTGGGATAAGTGGAAACTGCACATCCCCGCCGTAGGATCGATTATCGAGCGTTC
GACGTTAGCCCGTTATTGTCGCAGTTTCTCTATGATGCTGAGCGCTGGCGTGCCGATGACGCAGGCCCTAAGTTTAGTGG
CTGATGCGGTAGATAATGCCTACATGCACGACAAAATAGTCGGTATGCGCCGTGGGATTGAGTCTGGCGACTCTATGTTA
AGGGTATCGAATCAGAGTAAGTTATTTACGCCGTTGGTGCTGCAAATGGTGGCAGTGGGTGAAGAGACGGGGCAAATCGA
TCAATTACTCAATGATGCGGCAGACTTCTATGAGGGCGAAGTAGACTATGATTTAAAGAACCTCACCGCTAAATTGGAGC
CTATTTTGATCGGTTTTGTGGCCGTGATTGTACTCGTGTTGGCCTTGGGGATATACCTGCCCATGTGGGATATGCTTAAT
GTGGTCAAGGGCGGTAAATAA

Upstream 100 bases:

>100_bases
CGACCATTGAAGAGGTGGCTAAGCTGGTAGAGGACGTGAGTGAATCTCAGATACCTTTGTCGAAGGATATTATTAGCCAA
CAAGGCGTTGAGGCGTAATT

Downstream 100 bases:

>100_bases
TCGATATGGATAATGTTTATCTTCTATCTTATGTGTGGGGCTGAGGGTAAATGCAGACTCAGCAAAAGGCAGAAAGCGAT
CTATTACGCATCTATGGGCG

Product: type II secretion system protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 406; Mature: 405

Protein sequence:

>406_residues
MPIYQYRGRSGQGQSVTGQLDAASESAAADMLLARGIIPLEVKVAKVVKSFSLAQLFGGKVALEELQIFTRQMYSLTRSG
IPILRAIAGLSETAHSQRMKDALNDISEQLTAGRPLSSSMNQHPDVFDSLFVSMVHVGENTGKLEDAFIQLSGYIEREQE
TRRRIKSAMRYPMFVLISIALAMVILNIMVIPKFAEMFSRFGADLPWATKVLIGTSNLFVNYWALMLVALIGTIIGIRYW
HHTEKGEKQWDKWKLHIPAVGSIIERSTLARYCRSFSMMLSAGVPMTQALSLVADAVDNAYMHDKIVGMRRGIESGDSML
RVSNQSKLFTPLVLQMVAVGEETGQIDQLLNDAADFYEGEVDYDLKNLTAKLEPILIGFVAVIVLVLALGIYLPMWDMLN
VVKGGK

Sequences:

>Translated_406_residues
MPIYQYRGRSGQGQSVTGQLDAASESAAADMLLARGIIPLEVKVAKVVKSFSLAQLFGGKVALEELQIFTRQMYSLTRSG
IPILRAIAGLSETAHSQRMKDALNDISEQLTAGRPLSSSMNQHPDVFDSLFVSMVHVGENTGKLEDAFIQLSGYIEREQE
TRRRIKSAMRYPMFVLISIALAMVILNIMVIPKFAEMFSRFGADLPWATKVLIGTSNLFVNYWALMLVALIGTIIGIRYW
HHTEKGEKQWDKWKLHIPAVGSIIERSTLARYCRSFSMMLSAGVPMTQALSLVADAVDNAYMHDKIVGMRRGIESGDSML
RVSNQSKLFTPLVLQMVAVGEETGQIDQLLNDAADFYEGEVDYDLKNLTAKLEPILIGFVAVIVLVLALGIYLPMWDMLN
VVKGGK
>Mature_405_residues
PIYQYRGRSGQGQSVTGQLDAASESAAADMLLARGIIPLEVKVAKVVKSFSLAQLFGGKVALEELQIFTRQMYSLTRSGI
PILRAIAGLSETAHSQRMKDALNDISEQLTAGRPLSSSMNQHPDVFDSLFVSMVHVGENTGKLEDAFIQLSGYIEREQET
RRRIKSAMRYPMFVLISIALAMVILNIMVIPKFAEMFSRFGADLPWATKVLIGTSNLFVNYWALMLVALIGTIIGIRYWH
HTEKGEKQWDKWKLHIPAVGSIIERSTLARYCRSFSMMLSAGVPMTQALSLVADAVDNAYMHDKIVGMRRGIESGDSMLR
VSNQSKLFTPLVLQMVAVGEETGQIDQLLNDAADFYEGEVDYDLKNLTAKLEPILIGFVAVIVLVLALGIYLPMWDMLNV
VKGGK

Specific function: Involved in the translocation of the type IV pilin [H]

COG id: COG1459

COG function: function code NU; Type II secretory pathway, component PulF

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP F family [H]

Homologues:

Organism=Escherichia coli, GI1789724, Length=396, Percent_Identity=27.020202020202, Blast_Score=184, Evalue=1e-47,
Organism=Escherichia coli, GI1786295, Length=406, Percent_Identity=25.1231527093596, Blast_Score=118, Evalue=5e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003004
- InterPro:   IPR018076
- InterPro:   IPR001992 [H]

Pfam domain/function: PF00482 GSPII_F [H]

EC number: NA

Molecular weight: Translated: 45030; Mature: 44899

Theoretical pI: Translated: 7.78; Mature: 7.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIYQYRGRSGQGQSVTGQLDAASESAAADMLLARGIIPLEVKVAKVVKSFSLAQLFGGK
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCH
VALEELQIFTRQMYSLTRSGIPILRAIAGLSETAHSQRMKDALNDISEQLTAGRPLSSSM
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHC
NQHPDVFDSLFVSMVHVGENTGKLEDAFIQLSGYIEREQETRRRIKSAMRYPMFVLISIA
CCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAMVILNIMVIPKFAEMFSRFGADLPWATKVLIGTSNLFVNYWALMLVALIGTIIGIRYW
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
HHTEKGEKQWDKWKLHIPAVGSIIERSTLARYCRSFSMMLSAGVPMTQALSLVADAVDNA
HCCCCCHHCHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
YMHDKIVGMRRGIESGDSMLRVSNQSKLFTPLVLQMVAVGEETGQIDQLLNDAADFYEGE
HHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC
VDYDLKNLTAKLEPILIGFVAVIVLVLALGIYLPMWDMLNVVKGGK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PIYQYRGRSGQGQSVTGQLDAASESAAADMLLARGIIPLEVKVAKVVKSFSLAQLFGGK
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCH
VALEELQIFTRQMYSLTRSGIPILRAIAGLSETAHSQRMKDALNDISEQLTAGRPLSSSM
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHC
NQHPDVFDSLFVSMVHVGENTGKLEDAFIQLSGYIEREQETRRRIKSAMRYPMFVLISIA
CCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAMVILNIMVIPKFAEMFSRFGADLPWATKVLIGTSNLFVNYWALMLVALIGTIIGIRYW
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
HHTEKGEKQWDKWKLHIPAVGSIIERSTLARYCRSFSMMLSAGVPMTQALSLVADAVDNA
HCCCCCHHCHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
YMHDKIVGMRRGIESGDSMLRVSNQSKLFTPLVLQMVAVGEETGQIDQLLNDAADFYEGE
HHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC
VDYDLKNLTAKLEPILIGFVAVIVLVLALGIYLPMWDMLNVVKGGK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8820654 [H]