| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is maeB [H]
Identifier: 160873621
GI number: 160873621
Start: 570941
End: 572185
Strand: Direct
Name: maeB [H]
Synonym: Sbal195_0499
Alternate gene names: 160873621
Gene position: 570941-572185 (Clockwise)
Preceding gene: 160873620
Following gene: 160873622
Centisome position: 10.68
GC content: 46.27
Gene sequence:
>1245_bases ATGTCAGATATTCGTCAACAAGCACTCGATTATCATGAATTTCCAATACCAGGCAAAACCGCAGTTTGCCTTACCAAACC TGCCGAAACGAGTCACGATCTCGCCCTAGCTTATAGCCCTGGTGTGGCTGAGCCTGTGCGTGAAATCGCGGCTAATCCTG ATAATGCGTATCGTTATACCAATAAAGGTAATACGGTTGCCGTGATTACTAATGGTACGGCGATCTTAGGTTTAGGCAAT TTAGGCCCCTTGGCTTCTAAACCTGTGATGGAAGGCAAAGCATTATTGTTCAAGCATTTTGCAAATATCGATTCGACAGA TATTGAGATCACCCACAATACGCCTGAAGAATTTATCAATACAGTTGCAGCGATTGCTGACACTTTTGGTGGTATCAATC TTGAAGATATTAAAGCGCCCGAATGCTTTGTTATCGAACGTGAATTGATTGCCCGTTGTAAAGTACCGGTATTCCATGAC GATCAGCACGGCACCGCAATTGTGACTGCGGCGGGTATGATTAATGCGCTGGAAATTCAAGGCAAGTTGATCAGCGATGC AACGTTTGTGTGTATGGGCGCCGGTGCTGCTGCCATTGCTTGTATGACTATGCTGGTCAAATGTGGTGCGAATCGCGCTA ACATTTATATGCTAGACACTAAAGGTGTTATTCATTCTGGCCGTACGGATCTTAATGAATATAAAGCGCTATTTGCGAAT GATACCGATAAACGCACGCTTCTTGATGTTATTAAAGGCGCAGACGTGTTTTTAGGCCTATCAGGTCCTGACGTGATTGG TGCAGAAGAAGTTGCGCTGATGGCTGATAAGCCGGTGATTTTTGCTTGTTCTAACCCAGATCCTGAAATCAAACCGGCAC TGGCTCACGCAACGCGTAGCGATTTGATCATGGGTACCGGTCGCAGCGATTATCCAAACCAAGTGAATAACGTATTGTGT TTCCCGTTTATTTTCCGTGGTGCCTTGGATGTGCGTGCGTCATGCATTAATGATGAGATGAAAATCGCCGCGGTTCATGC CATTGCTGCACTGGCAAAAGAGCCTGTGCCTGCGAGTGTATTAAAGGCTTATCCTAATGTGACTTCACTGAGTTTTGGCC CTGAATACGTGCTGCCAAAACCTATGGACCCACGTTTATTGCCTAATGTTGCCCGTGCGGTTGCACAGGCGGCTATCGAC TCTGGTGTCGCTGCTATCCCTACTTTACCTAAATACGCCGACTAG
Upstream 100 bases:
>100_bases CGACCAGCCAGGCTATTAACATCACCCTTTGGTGAGACTAGATGTGTGTTGGTAGGCCTTACTCTCATAAATTATAAATG TCGCATTTCAGGATTTTAAA
Downstream 100 bases:
>100_bases GCTAAAAGTGGTAAAAACATCGAAAAGAGGCTAATTAGCCTCTTTTTTGTTTTTAAGTGGACATTAAAGTCACAGCGTCT TGGTTGCCTTTTAGGTTATG
Product: malate dehydrogenase
Products: NA
Alternate protein names: NADP-ME [H]
Number of amino acids: Translated: 414; Mature: 413
Protein sequence:
>414_residues MSDIRQQALDYHEFPIPGKTAVCLTKPAETSHDLALAYSPGVAEPVREIAANPDNAYRYTNKGNTVAVITNGTAILGLGN LGPLASKPVMEGKALLFKHFANIDSTDIEITHNTPEEFINTVAAIADTFGGINLEDIKAPECFVIERELIARCKVPVFHD DQHGTAIVTAAGMINALEIQGKLISDATFVCMGAGAAAIACMTMLVKCGANRANIYMLDTKGVIHSGRTDLNEYKALFAN DTDKRTLLDVIKGADVFLGLSGPDVIGAEEVALMADKPVIFACSNPDPEIKPALAHATRSDLIMGTGRSDYPNQVNNVLC FPFIFRGALDVRASCINDEMKIAAVHAIAALAKEPVPASVLKAYPNVTSLSFGPEYVLPKPMDPRLLPNVARAVAQAAID SGVAAIPTLPKYAD
Sequences:
>Translated_414_residues MSDIRQQALDYHEFPIPGKTAVCLTKPAETSHDLALAYSPGVAEPVREIAANPDNAYRYTNKGNTVAVITNGTAILGLGN LGPLASKPVMEGKALLFKHFANIDSTDIEITHNTPEEFINTVAAIADTFGGINLEDIKAPECFVIERELIARCKVPVFHD DQHGTAIVTAAGMINALEIQGKLISDATFVCMGAGAAAIACMTMLVKCGANRANIYMLDTKGVIHSGRTDLNEYKALFAN DTDKRTLLDVIKGADVFLGLSGPDVIGAEEVALMADKPVIFACSNPDPEIKPALAHATRSDLIMGTGRSDYPNQVNNVLC FPFIFRGALDVRASCINDEMKIAAVHAIAALAKEPVPASVLKAYPNVTSLSFGPEYVLPKPMDPRLLPNVARAVAQAAID SGVAAIPTLPKYAD >Mature_413_residues SDIRQQALDYHEFPIPGKTAVCLTKPAETSHDLALAYSPGVAEPVREIAANPDNAYRYTNKGNTVAVITNGTAILGLGNL GPLASKPVMEGKALLFKHFANIDSTDIEITHNTPEEFINTVAAIADTFGGINLEDIKAPECFVIERELIARCKVPVFHDD QHGTAIVTAAGMINALEIQGKLISDATFVCMGAGAAAIACMTMLVKCGANRANIYMLDTKGVIHSGRTDLNEYKALFAND TDKRTLLDVIKGADVFLGLSGPDVIGAEEVALMADKPVIFACSNPDPEIKPALAHATRSDLIMGTGRSDYPNQVNNVLCF PFIFRGALDVRASCINDEMKIAAVHAIAALAKEPVPASVLKAYPNVTSLSFGPEYVLPKPMDPRLLPNVARAVAQAAIDS GVAAIPTLPKYAD
Specific function: Unknown
COG id: COG0281
COG function: function code C; Malic enzyme
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the phosphate acetyltransferase and butyryltransferase family [H]
Homologues:
Organism=Homo sapiens, GI62420882, Length=368, Percent_Identity=26.6304347826087, Blast_Score=86, Evalue=6e-17, Organism=Homo sapiens, GI62420880, Length=368, Percent_Identity=26.6304347826087, Blast_Score=86, Evalue=6e-17, Organism=Homo sapiens, GI239049447, Length=368, Percent_Identity=26.6304347826087, Blast_Score=86, Evalue=6e-17, Organism=Homo sapiens, GI4505143, Length=341, Percent_Identity=26.099706744868, Blast_Score=80, Evalue=4e-15, Organism=Escherichia coli, GI1788806, Length=407, Percent_Identity=60.4422604422604, Blast_Score=478, Evalue=1e-136, Organism=Escherichia coli, GI87081919, Length=291, Percent_Identity=26.4604810996564, Blast_Score=69, Evalue=4e-13, Organism=Caenorhabditis elegans, GI17537199, Length=370, Percent_Identity=27.8378378378378, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI21356279, Length=407, Percent_Identity=26.044226044226, Blast_Score=84, Evalue=2e-16, Organism=Drosophila melanogaster, GI281362674, Length=407, Percent_Identity=26.044226044226, Blast_Score=84, Evalue=2e-16, Organism=Drosophila melanogaster, GI281362672, Length=407, Percent_Identity=26.044226044226, Blast_Score=84, Evalue=3e-16, Organism=Drosophila melanogaster, GI24646388, Length=365, Percent_Identity=27.6712328767123, Blast_Score=78, Evalue=1e-14, Organism=Drosophila melanogaster, GI24646386, Length=365, Percent_Identity=27.6712328767123, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI78707242, Length=342, Percent_Identity=26.0233918128655, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI78707238, Length=342, Percent_Identity=26.0233918128655, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI78707240, Length=342, Percent_Identity=26.0233918128655, Blast_Score=76, Evalue=5e-14, Organism=Drosophila melanogaster, GI281363505, Length=356, Percent_Identity=23.876404494382, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI78707236, Length=356, Percent_Identity=23.876404494382, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI281363503, Length=356, Percent_Identity=23.876404494382, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI78707232, Length=356, Percent_Identity=23.876404494382, Blast_Score=74, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015884 - InterPro: IPR012301 - InterPro: IPR012302 - InterPro: IPR012188 - InterPro: IPR016040 - InterPro: IPR002505 [H]
Pfam domain/function: PF00390 malic; PF03949 Malic_M; PF01515 PTA_PTB [H]
EC number: =1.1.1.40 [H]
Molecular weight: Translated: 44026; Mature: 43895
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: PS00331 MALIC_ENZYMES ; PS00141 ASP_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDIRQQALDYHEFPIPGKTAVCLTKPAETSHDLALAYSPGVAEPVREIAANPDNAYRYT CCHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCEEEEECCCHHHHHHHHHCCCCCCEEEE NKGNTVAVITNGTAILGLGNLGPLASKPVMEGKALLFKHFANIDSTDIEITHNTPEEFIN CCCCEEEEEECCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCHHHHHH TVAAIADTFGGINLEDIKAPECFVIERELIARCKVPVFHDDQHGTAIVTAAGMINALEIQ HHHHHHHHHCCCCHHHCCCCCEEEEEHHHHHHCCCCEEECCCCCEEEEEECCCEEEEEEC GKLISDATFVCMGAGAAAIACMTMLVKCGANRANIYMLDTKGVIHSGRTDLNEYKALFAN CEEECCCEEEEECCCHHHHHHHHHHHHHCCCCCEEEEEECCCCEECCCCCHHHHHHHHCC DTDKRTLLDVIKGADVFLGLSGPDVIGAEEVALMADKPVIFACSNPDPEIKPALAHATRS CCCHHHHHHHHCCCCEEEECCCCCCCCCCCEEEEECCCEEEEECCCCCCCCHHHHHCCCC DLIMGTGRSDYPNQVNNVLCFPFIFRGALDVRASCINDEMKIAAVHAIAALAKEPVPASV CEEEECCCCCCCHHHHCEEEEHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHH LKAYPNVTSLSFGPEYVLPKPMDPRLLPNVARAVAQAAIDSGVAAIPTLPKYAD HHHCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEECCCCCCCCC >Mature Secondary Structure SDIRQQALDYHEFPIPGKTAVCLTKPAETSHDLALAYSPGVAEPVREIAANPDNAYRYT CHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCEEEEECCCHHHHHHHHHCCCCCCEEEE NKGNTVAVITNGTAILGLGNLGPLASKPVMEGKALLFKHFANIDSTDIEITHNTPEEFIN CCCCEEEEEECCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCHHHHHH TVAAIADTFGGINLEDIKAPECFVIERELIARCKVPVFHDDQHGTAIVTAAGMINALEIQ HHHHHHHHHCCCCHHHCCCCCEEEEEHHHHHHCCCCEEECCCCCEEEEEECCCEEEEEEC GKLISDATFVCMGAGAAAIACMTMLVKCGANRANIYMLDTKGVIHSGRTDLNEYKALFAN CEEECCCEEEEECCCHHHHHHHHHHHHHCCCCCEEEEEECCCCEECCCCCHHHHHHHHCC DTDKRTLLDVIKGADVFLGLSGPDVIGAEEVALMADKPVIFACSNPDPEIKPALAHATRS CCCHHHHHHHHCCCCEEEECCCCCCCCCCCEEEEECCCEEEEECCCCCCCCHHHHHCCCC DLIMGTGRSDYPNQVNNVLCFPFIFRGALDVRASCINDEMKIAAVHAIAALAKEPVPASV CEEEECCCCCCCHHHHCEEEEHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHH LKAYPNVTSLSFGPEYVLPKPMDPRLLPNVARAVAQAAIDSGVAAIPTLPKYAD HHHCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503; 36376 [H]