| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is hap [H]
Identifier: 160873580
GI number: 160873580
Start: 522977
End: 525313
Strand: Reverse
Name: hap [H]
Synonym: Sbal195_0456
Alternate gene names: 160873580
Gene position: 525313-522977 (Counterclockwise)
Preceding gene: 160873581
Following gene: 160873575
Centisome position: 9.82
GC content: 48.14
Gene sequence:
>2337_bases ATGATGCTAAACAAAAAACTGTCGCTACTCTTCATTGCTGTGTCGGCCACGTTAGGCACATCAGCATTTGCTGCTGATGT TGTCGATGTCGGCACACTCAGAAGCGCGTCTTCAAGCAATAACTTAGTGTCTCAGTTCAACTTAGACGCAGGTAGCCAAC TCAAAGTCGAGAAAAAACTCGACCTAGGTCAAGGCAAGCAAAAGCAACGTTTACAACAATATTTCCATGACGTGCCTGTT TATGGTTTCTCTGTTGCAACGTCACAATCGAGCATGGGCTTCTACAGTGACATGTCTGGCCGCGTATTAAAAAATATTGA AAAGTCGGCTGATTTTGTCAAACCCACTTTAACGGCTAACAAAGCGTTAGACATTGCCATTCGTGGCAAGTCAGAGAAAG CTGTTGCCGGCCTAAAAGCTGAAAACAAACAAGCTAAATTATGGCTTTACCTGGATGATGCGGCTAAAACTCGCCTCGTT TATGTGACGTCTTTTGTGGTATATGGCGATGAGCCAAGCCGTCCATTCACTATGATTGACGCACACTCAGGTGAAGTGCT CAAGCGTTGGGAAGGGATTAACCACGCCGCTAGCGGTACAGGTCCTGGCGGTAACATCAAGACTGGCCAATACGAATACG GTACGGATTTTTCTTACTTAGACGTTGAAGTGAGTGGTGACACCTGCACCATGAACTCACCTAACGTGAAAACCGTTAAC TTAAACGGTGCCACATCAGGCGCAACAGCCTTCTCTTATACTTGCCCACGCAATACCGTTAAAGAGATCAACGGTGCTTA CTCGCCATTAAACGATGCGCACTATTTTGGTAACGTGATCTACAACATGTATAGCGAGTGGTACAACACTGCGCCGTTAA CTTTCCAGTTAACCATGCGGGTTCACTACAGCAGCAACTATGAAAACGCCTTCTGGGACGGCAGTGCTATGACCTTCGGT GATGGCGCAACGACCTTCTATCCATTAGTGAGCTTAGATGTCTCGGCACACGAAGTGAGCCATGGTTTCACTGAGCAAAA CTCAGGCCTGATTTACGATGCTCAATCTGGTGGCATGAACGAAGCCTTCTCTGATATGGCGGGTGAAGCTGCTGAATTTT ACATGCACGGCACGAACGACTGGTTAGTCGGTGCAGATATCTTTAAAGGCAATGGCGCACTGCGTTACATGGCAGATCCA ACCTTAGACGGTATCTCAATCGGCCATATCGACGATTACTATGATGGTATCGACGTACACCACAGTTCAGGTGTCTTCAA CAAAGCCTTCTACACACTCGCAAACTTACCGGGCTGGGATACACGCACTGCATTCCAAACATTTGTGGTTGCTAACCAAT TATATTGGACGGCTGACAGCTTGTTCTGGCAAGGCGCTTGTGGCGTTAAATCTGCAGCGACTGACTTAGGCTTAAGTGCT GACGATGTGGTTACTGCGTTTGCAGCTGTGGGTATCACACCTTGTGAAACGCCACCACCACCGCCACCACCAGAAGCCAC TGAGCTCGCGAACGGTGTCGCTGTGACGGATTTAGCGGGCGCATCTGGTAGCAAACAATACTACAAACTCGACGTAGCAA GCGGTGCAACCAACCTGAGTTTTAATATGTCAGGCGGCACGGGTGATGCGGACATGTATGTTAAATTCGGCCAAGCTCCT ACCTCTAGTAGCTATGATTGCCGTCCATACAAAGCCGGTAATGCCGAAAGCTGCCCTATCGATCCAGCCCAAACAGGAAC TTATTGGATCATGGTCAGTGGCTATAGCAGCTACACAGGTGTGAGCCTAGTGGGTGCTTATGACGGTGGCGATGAGATAC CAAACCAAGATCCAACAGCGGGCTTTACGGCAAGCTTTGCCAACGGTAACGGTAGCTTCACTAGCACCAGTACTGACAGC GACGGTGATGTCGTTGCATGGAGCTGGAGTTTCGGTGATGGCACAACTGCTTCAGGCGCAAGTGTAAATCATCAGTATGC ACAGTCAGGCAACTACACAGTGACACTGACAGTGACTGACAACGATGGCGCAACAGCAATCACTTCTGAAGAATTTGCGG TTGAAGTACCAGAAGTGGCGTTAGAAATGACAGTGAAAAACGCTAACAAATCTCGTCGCGGTAGCATTCGTGTTGCACTC GCATGGGAAGGCCATAACGCTGATGAGTACACTATCTTCCGTAACGGCGTTGCGGTTAGTACTTCAAGCAATTCATCGTT TATTGACCGTTTCACTGACCTAGCTGGCACTAGCTTCAGCTATAAAGTGTGTGAAACTAACGGCCCTTGCTCAAACGAAG AAACCGTTAACTTTTAA
Upstream 100 bases:
>100_bases CGACGACCCTGTAGAAATTACAATAAAAAAACGCTCGCCCGAGCCAGTTAAGCAGTATGGCATTCCAACGTTAATGACAA ACGGAAAAAGGATTTTAAGC
Downstream 100 bases:
>100_bases TCGCATAAGATAATCGTATCGTGGCGCTAGCGTAAAATCCTAGCGCCGACTCATCGATAAACTTCTCGTTTCTTGTTAAT GCCACTCAGCCTTTTTTGAG
Product: peptidase M4 thermolysin
Products: NA
Alternate protein names: HA/protease; Vibriolysin [H]
Number of amino acids: Translated: 778; Mature: 778
Protein sequence:
>778_residues MMLNKKLSLLFIAVSATLGTSAFAADVVDVGTLRSASSSNNLVSQFNLDAGSQLKVEKKLDLGQGKQKQRLQQYFHDVPV YGFSVATSQSSMGFYSDMSGRVLKNIEKSADFVKPTLTANKALDIAIRGKSEKAVAGLKAENKQAKLWLYLDDAAKTRLV YVTSFVVYGDEPSRPFTMIDAHSGEVLKRWEGINHAASGTGPGGNIKTGQYEYGTDFSYLDVEVSGDTCTMNSPNVKTVN LNGATSGATAFSYTCPRNTVKEINGAYSPLNDAHYFGNVIYNMYSEWYNTAPLTFQLTMRVHYSSNYENAFWDGSAMTFG DGATTFYPLVSLDVSAHEVSHGFTEQNSGLIYDAQSGGMNEAFSDMAGEAAEFYMHGTNDWLVGADIFKGNGALRYMADP TLDGISIGHIDDYYDGIDVHHSSGVFNKAFYTLANLPGWDTRTAFQTFVVANQLYWTADSLFWQGACGVKSAATDLGLSA DDVVTAFAAVGITPCETPPPPPPPEATELANGVAVTDLAGASGSKQYYKLDVASGATNLSFNMSGGTGDADMYVKFGQAP TSSSYDCRPYKAGNAESCPIDPAQTGTYWIMVSGYSSYTGVSLVGAYDGGDEIPNQDPTAGFTASFANGNGSFTSTSTDS DGDVVAWSWSFGDGTTASGASVNHQYAQSGNYTVTLTVTDNDGATAITSEEFAVEVPEVALEMTVKNANKSRRGSIRVAL AWEGHNADEYTIFRNGVAVSTSSNSSFIDRFTDLAGTSFSYKVCETNGPCSNEETVNF
Sequences:
>Translated_778_residues MMLNKKLSLLFIAVSATLGTSAFAADVVDVGTLRSASSSNNLVSQFNLDAGSQLKVEKKLDLGQGKQKQRLQQYFHDVPV YGFSVATSQSSMGFYSDMSGRVLKNIEKSADFVKPTLTANKALDIAIRGKSEKAVAGLKAENKQAKLWLYLDDAAKTRLV YVTSFVVYGDEPSRPFTMIDAHSGEVLKRWEGINHAASGTGPGGNIKTGQYEYGTDFSYLDVEVSGDTCTMNSPNVKTVN LNGATSGATAFSYTCPRNTVKEINGAYSPLNDAHYFGNVIYNMYSEWYNTAPLTFQLTMRVHYSSNYENAFWDGSAMTFG DGATTFYPLVSLDVSAHEVSHGFTEQNSGLIYDAQSGGMNEAFSDMAGEAAEFYMHGTNDWLVGADIFKGNGALRYMADP TLDGISIGHIDDYYDGIDVHHSSGVFNKAFYTLANLPGWDTRTAFQTFVVANQLYWTADSLFWQGACGVKSAATDLGLSA DDVVTAFAAVGITPCETPPPPPPPEATELANGVAVTDLAGASGSKQYYKLDVASGATNLSFNMSGGTGDADMYVKFGQAP TSSSYDCRPYKAGNAESCPIDPAQTGTYWIMVSGYSSYTGVSLVGAYDGGDEIPNQDPTAGFTASFANGNGSFTSTSTDS DGDVVAWSWSFGDGTTASGASVNHQYAQSGNYTVTLTVTDNDGATAITSEEFAVEVPEVALEMTVKNANKSRRGSIRVAL AWEGHNADEYTIFRNGVAVSTSSNSSFIDRFTDLAGTSFSYKVCETNGPCSNEETVNF >Mature_778_residues MMLNKKLSLLFIAVSATLGTSAFAADVVDVGTLRSASSSNNLVSQFNLDAGSQLKVEKKLDLGQGKQKQRLQQYFHDVPV YGFSVATSQSSMGFYSDMSGRVLKNIEKSADFVKPTLTANKALDIAIRGKSEKAVAGLKAENKQAKLWLYLDDAAKTRLV YVTSFVVYGDEPSRPFTMIDAHSGEVLKRWEGINHAASGTGPGGNIKTGQYEYGTDFSYLDVEVSGDTCTMNSPNVKTVN LNGATSGATAFSYTCPRNTVKEINGAYSPLNDAHYFGNVIYNMYSEWYNTAPLTFQLTMRVHYSSNYENAFWDGSAMTFG DGATTFYPLVSLDVSAHEVSHGFTEQNSGLIYDAQSGGMNEAFSDMAGEAAEFYMHGTNDWLVGADIFKGNGALRYMADP TLDGISIGHIDDYYDGIDVHHSSGVFNKAFYTLANLPGWDTRTAFQTFVVANQLYWTADSLFWQGACGVKSAATDLGLSA DDVVTAFAAVGITPCETPPPPPPPEATELANGVAVTDLAGASGSKQYYKLDVASGATNLSFNMSGGTGDADMYVKFGQAP TSSSYDCRPYKAGNAESCPIDPAQTGTYWIMVSGYSSYTGVSLVGAYDGGDEIPNQDPTAGFTASFANGNGSFTSTSTDS DGDVVAWSWSFGDGTTASGASVNHQYAQSGNYTVTLTVTDNDGATAITSEEFAVEVPEVALEMTVKNANKSRRGSIRVAL AWEGHNADEYTIFRNGVAVSTSSNSSFIDRFTDLAGTSFSYKVCETNGPCSNEETVNF
Specific function: May play a role in the pathogenesis of cholera. Hap nicks and activates the A subunit of cholera enterotoxin and related enterotoxins [H]
COG id: COG3227
COG function: function code E; Zinc metalloprotease (elastase)
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M4 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005075 - InterPro: IPR007280 - InterPro: IPR013856 - InterPro: IPR001570 - InterPro: IPR011096 [H]
Pfam domain/function: PF07504 FTP; PF03413 PepSY; PF01447 Peptidase_M4; PF02868 Peptidase_M4_C; PF04151 PPC [H]
EC number: NA
Molecular weight: Translated: 83244; Mature: 83244
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: PS50093 PKD ; PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMLNKKLSLLFIAVSATLGTSAFAADVVDVGTLRSASSSNNLVSQFNLDAGSQLKVEKKL CCCCCCEEEEEEEEEHHCCCCHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCEEEEEECC DLGQGKQKQRLQQYFHDVPVYGFSVATSQSSMGFYSDMSGRVLKNIEKSADFVKPTLTAN CCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCEECCC KALDIAIRGKSEKAVAGLKAENKQAKLWLYLDDAAKTRLVYVTSFVVYGDEPSRPFTMID CEEEEEEECCCCCEEECCCCCCCCEEEEEEECCCCCEEEEEEEEEEEECCCCCCCEEEEE AHSGEVLKRWEGINHAASGTGPGGNIKTGQYEYGTDFSYLDVEVSGDTCTMNSPNVKTVN CCCCHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEEECCCEEECCCCCEEEEE LNGATSGATAFSYTCPRNTVKEINGAYSPLNDAHYFGNVIYNMYSEWYNTAPLTFQLTMR ECCCCCCCEEEEEECCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEE VHYSSNYENAFWDGSAMTFGDGATTFYPLVSLDVSAHEVSHGFTEQNSGLIYDAQSGGMN EEECCCCCCEEECCCEEEECCCCCEEEEEEEECCCHHHHHCCCCCCCCCEEEECCCCCCH EAFSDMAGEAAEFYMHGTNDWLVGADIFKGNGALRYMADPTLDGISIGHIDDYYDGIDVH HHHHHHCCCCEEEEEECCCCEEEEEEEEECCCEEEEEECCCCCCEEECCCCCCCCCEEEE HSSGVFNKAFYTLANLPGWDTRTAFQTFVVANQLYWTADSLFWQGACGVKSAATDLGLSA CCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCEEEEEECCEEECCCCCCCHHHHHCCCCH DDVVTAFAAVGITPCETPPPPPPPEATELANGVAVTDLAGASGSKQYYKLDVASGATNLS HHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCEEEEEECCCCCCCEEEEEEECCCCCEEE FNMSGGTGDADMYVKFGQAPTSSSYDCRPYKAGNAESCPIDPAQTGTYWIMVSGYSSYTG EEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCC VSLVGAYDGGDEIPNQDPTAGFTASFANGNGSFTSTSTDSDGDVVAWSWSFGDGTTASGA EEEEEECCCCCCCCCCCCCCCEEEEEECCCCCEEECCCCCCCCEEEEEEECCCCCCCCCC SVNHQYAQSGNYTVTLTVTDNDGATAITSEEFAVEVPEVALEMTVKNANKSRRGSIRVAL CCCCHHHCCCCEEEEEEEECCCCCEEEECCCCEEECCCEEEEEEEECCCCCCCCEEEEEE AWEGHNADEYTIFRNGVAVSTSSNSSFIDRFTDLAGTSFSYKVCETNGPCSNEETVNF EECCCCCCEEEEEECCEEEEECCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCC >Mature Secondary Structure MMLNKKLSLLFIAVSATLGTSAFAADVVDVGTLRSASSSNNLVSQFNLDAGSQLKVEKKL CCCCCCEEEEEEEEEHHCCCCHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCEEEEEECC DLGQGKQKQRLQQYFHDVPVYGFSVATSQSSMGFYSDMSGRVLKNIEKSADFVKPTLTAN CCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCEECCC KALDIAIRGKSEKAVAGLKAENKQAKLWLYLDDAAKTRLVYVTSFVVYGDEPSRPFTMID CEEEEEEECCCCCEEECCCCCCCCEEEEEEECCCCCEEEEEEEEEEEECCCCCCCEEEEE AHSGEVLKRWEGINHAASGTGPGGNIKTGQYEYGTDFSYLDVEVSGDTCTMNSPNVKTVN CCCCHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEEECCCEEECCCCCEEEEE LNGATSGATAFSYTCPRNTVKEINGAYSPLNDAHYFGNVIYNMYSEWYNTAPLTFQLTMR ECCCCCCCEEEEEECCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEE VHYSSNYENAFWDGSAMTFGDGATTFYPLVSLDVSAHEVSHGFTEQNSGLIYDAQSGGMN EEECCCCCCEEECCCEEEECCCCCEEEEEEEECCCHHHHHCCCCCCCCCEEEECCCCCCH EAFSDMAGEAAEFYMHGTNDWLVGADIFKGNGALRYMADPTLDGISIGHIDDYYDGIDVH HHHHHHCCCCEEEEEECCCCEEEEEEEEECCCEEEEEECCCCCCEEECCCCCCCCCEEEE HSSGVFNKAFYTLANLPGWDTRTAFQTFVVANQLYWTADSLFWQGACGVKSAATDLGLSA CCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCEEEEEECCEEECCCCCCCHHHHHCCCCH DDVVTAFAAVGITPCETPPPPPPPEATELANGVAVTDLAGASGSKQYYKLDVASGATNLS HHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCEEEEEECCCCCCCEEEEEEECCCCCEEE FNMSGGTGDADMYVKFGQAPTSSSYDCRPYKAGNAESCPIDPAQTGTYWIMVSGYSSYTG EEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCC VSLVGAYDGGDEIPNQDPTAGFTASFANGNGSFTSTSTDSDGDVVAWSWSFGDGTTASGA EEEEEECCCCCCCCCCCCCCCEEEEEECCCCCEEECCCCCCCCEEEEEEECCCCCCCCCC SVNHQYAQSGNYTVTLTVTDNDGATAITSEEFAVEVPEVALEMTVKNANKSRRGSIRVAL CCCCHHHCCCCEEEEEEEECCCCCEEEECCCCEEECCCEEEEEEEECCCCCCCCEEEEEE AWEGHNADEYTIFRNGVAVSTSSNSSFIDRFTDLAGTSFSYKVCETNGPCSNEETVNF EECCCCCCEEEEEECCEEEEECCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2045361; 10952301; 2123831 [H]