| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160873550
Identifier: 160873550
GI number: 160873550
Start: 492071
End: 492598
Strand: Reverse
Name: 160873550
Synonym: Sbal195_0425
Alternate gene names: NA
Gene position: 492598-492071 (Counterclockwise)
Preceding gene: 160873551
Following gene: 160873549
Centisome position: 9.21
GC content: 47.54
Gene sequence:
>528_bases ATGCGCTTAACTCTTATGGCAGCAGCAATTATGCTGGTATCAGTCCAAGCAAATGCCAGCATTGAACAACAGTTAACCCA ATGTGCAGCAACAGCCGATAAACTCGACCGCTTGATTTGCTATGACAAGCTAGCAGAAAACGTCAAAAGCGTAACACCAG CTTTGGCGAGCACTCAAGTTGCGCCTGCGACTGTAGCAACCGTTGCAGCCCCGACTGCTGTAGCAGTAGCGGCCACCGCG CCCCAAGCACCAGCCGCTAATATTGTCGATGACTTTGGGATGGAAGCTAAGCGCGTTCAAGAAAATACGGTCGATAAGAT TTATCTTGAAGTACAGTCTATGACTGAAGATCCCTACGGTGCTATCAAAGTAACATTCACTAATGGTCAGGTATGGAAAC AAACCGACGGCCGTAAGTTCAACTTAAAGCAAGGCGAAAAAGTCTACATTGAAAAAGCAGCCCTAGGCTCTTTCTTAATG GGCACTGATGAGCGCAATGCCAAGGCACGGGTAAAACGCCTAAACTAA
Upstream 100 bases:
>100_bases CAGCAAGCAAGGTGACGACGAGTCAGACGAAGATAGCGAACAAACAAACGACTAACGTCCTCGATGGCGTTAGGGGAATA ATATAATAAGGAACATTCTC
Downstream 100 bases:
>100_bases TGCCCTCATACATAGATATCGCTGTCAATTTACTTGGCAGCGCACTCGAGCCAGACACAGCATCGATAATACAAGCGGCG GCGGACCAAGGGGTTTCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 175; Mature: 175
Protein sequence:
>175_residues MRLTLMAAAIMLVSVQANASIEQQLTQCAATADKLDRLICYDKLAENVKSVTPALASTQVAPATVATVAAPTAVAVAATA PQAPAANIVDDFGMEAKRVQENTVDKIYLEVQSMTEDPYGAIKVTFTNGQVWKQTDGRKFNLKQGEKVYIEKAALGSFLM GTDERNAKARVKRLN
Sequences:
>Translated_175_residues MRLTLMAAAIMLVSVQANASIEQQLTQCAATADKLDRLICYDKLAENVKSVTPALASTQVAPATVATVAAPTAVAVAATA PQAPAANIVDDFGMEAKRVQENTVDKIYLEVQSMTEDPYGAIKVTFTNGQVWKQTDGRKFNLKQGEKVYIEKAALGSFLM GTDERNAKARVKRLN >Mature_175_residues MRLTLMAAAIMLVSVQANASIEQQLTQCAATADKLDRLICYDKLAENVKSVTPALASTQVAPATVATVAAPTAVAVAATA PQAPAANIVDDFGMEAKRVQENTVDKIYLEVQSMTEDPYGAIKVTFTNGQVWKQTDGRKFNLKQGEKVYIEKAALGSFLM GTDERNAKARVKRLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18821; Mature: 18821
Theoretical pI: Translated: 8.69; Mature: 8.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLTLMAAAIMLVSVQANASIEQQLTQCAATADKLDRLICYDKLAENVKSVTPALASTQV CCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCC APATVATVAAPTAVAVAATAPQAPAANIVDDFGMEAKRVQENTVDKIYLEVQSMTEDPYG CCHHHHHHHCCHHEEEEECCCCCCCCHHHHHCCCHHHHHHHHHHHHEEEEEECCCCCCCC AIKVTFTNGQVWKQTDGRKFNLKQGEKVYIEKAALGSFLMGTDERNAKARVKRLN EEEEEEECCEEEECCCCCEECCCCCCEEEEEHHHHHHHHCCCCCCCCHHHHCCCC >Mature Secondary Structure MRLTLMAAAIMLVSVQANASIEQQLTQCAATADKLDRLICYDKLAENVKSVTPALASTQV CCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCC APATVATVAAPTAVAVAATAPQAPAANIVDDFGMEAKRVQENTVDKIYLEVQSMTEDPYG CCHHHHHHHCCHHEEEEECCCCCCCCHHHHHCCCHHHHHHHHHHHHEEEEEECCCCCCCC AIKVTFTNGQVWKQTDGRKFNLKQGEKVYIEKAALGSFLMGTDERNAKARVKRLN EEEEEEECCEEEECCCCCEECCCCCCEEEEEHHHHHHHHCCCCCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA