| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is mraW
Identifier: 160873530
GI number: 160873530
Start: 461051
End: 461992
Strand: Direct
Name: mraW
Synonym: Sbal195_0405
Alternate gene names: 160873530
Gene position: 461051-461992 (Clockwise)
Preceding gene: 160873529
Following gene: 160873531
Centisome position: 8.62
GC content: 48.41
Gene sequence:
>942_bases ATGAGTCAAGAATTTGCCCATTTATCCGTGCTGCTAGCAGAAACGGTTGGCGGTTTAAACATCAAAGACGATGGCATCTA TATCGATGGCACGTTTGGCCGCGGTGGTCATTCAAGACAAGTGTTGCAGCAACTCGGTGAAAATGGCCGATTGATCGCAA TCGACCGTGACCCTCAAGCAATTGAAGCGGCAAAACAATTTGCTGACGATCCACGCTTTCAAATCGTGCATGGTGGTTTT GGTCAATTAGCCGATTACGTCGAAGAGCTTGGGCTTGTGGGCAAAATAGATGGCGTATTACTCGATTTAGGTGTGTCTTC ACCTCAGCTCGACGATGCCGAACGTGGCTTTAGTTTTATGCGTGATGGCCCGCTCGATATGCGCATGGATAACAGCCAAG GCCAAACAGCTGCGCAATGGTTAGCTCGCGCAGAAATTGAGGATATGGCTTGGGTATTTAAAACCTATGGCGAAGAGAAA AACGCTCGCCATATCGCCCGTTGCATCGCTGCCGATCGTGATAAAACGCCGTTTTTACGAACCAAAGATTTAGCCGATTT GATCGCGCGTATCACTAAGAGTAAAGAACGCAATAAGCACCCAGCGACTCGGGTGTTTCAGGCCATTCGGATTTATATCA ACAGTGAATTAGATCAAATTGATCAAGCGCTTGAAGGTGCGGTCAATGTACTGGCTCCCCAAGGACGCTTGTCGGTCATC AGTTTCCATTCTTTAGAAGATCGTATCGTGAAGCGCTTTATTCGCCGCCATAGCCAAGGCGAAAGTGTGCCGCACGGTTT TCCGGTCACTGAAGATCAAATTAACAAGTCGCGTAAGTTACGCGCCGTGGGTAAGGCGATTATGCCATCCGACGAAGAAA TCGAACGCAATGCCAGAGCTCGCAGCTCAGTGTTACGCATTGCCGAGCGTTTAGATTACTAA
Upstream 100 bases:
>100_bases GAGTGTCAGGAAACGATTCGAAGTGAGGAGCTTGCCAGTAACGAGCGCCTCGCGGATTTTTCACTTTAACGAGTCGCGAT AACTAAATAAGAAGAGAGTA
Downstream 100 bases:
>100_bases GGGGCGCACTGTGAGTAAGCCCTCGATCAATCTGCCACGGATCGTCTTACACGATTTATGGCTGCACAAATGGATCTTGT TATTAGCTCTGCTCGTGCTC
Product: S-adenosyl-methyltransferase MraW
Products: NA
Alternate protein names: 16S rRNA m(4)C1402 methyltransferase; rRNA (cytosine-N(4)-)-methyltransferase RsmH
Number of amino acids: Translated: 313; Mature: 312
Protein sequence:
>313_residues MSQEFAHLSVLLAETVGGLNIKDDGIYIDGTFGRGGHSRQVLQQLGENGRLIAIDRDPQAIEAAKQFADDPRFQIVHGGF GQLADYVEELGLVGKIDGVLLDLGVSSPQLDDAERGFSFMRDGPLDMRMDNSQGQTAAQWLARAEIEDMAWVFKTYGEEK NARHIARCIAADRDKTPFLRTKDLADLIARITKSKERNKHPATRVFQAIRIYINSELDQIDQALEGAVNVLAPQGRLSVI SFHSLEDRIVKRFIRRHSQGESVPHGFPVTEDQINKSRKLRAVGKAIMPSDEEIERNARARSSVLRIAERLDY
Sequences:
>Translated_313_residues MSQEFAHLSVLLAETVGGLNIKDDGIYIDGTFGRGGHSRQVLQQLGENGRLIAIDRDPQAIEAAKQFADDPRFQIVHGGF GQLADYVEELGLVGKIDGVLLDLGVSSPQLDDAERGFSFMRDGPLDMRMDNSQGQTAAQWLARAEIEDMAWVFKTYGEEK NARHIARCIAADRDKTPFLRTKDLADLIARITKSKERNKHPATRVFQAIRIYINSELDQIDQALEGAVNVLAPQGRLSVI SFHSLEDRIVKRFIRRHSQGESVPHGFPVTEDQINKSRKLRAVGKAIMPSDEEIERNARARSSVLRIAERLDY >Mature_312_residues SQEFAHLSVLLAETVGGLNIKDDGIYIDGTFGRGGHSRQVLQQLGENGRLIAIDRDPQAIEAAKQFADDPRFQIVHGGFG QLADYVEELGLVGKIDGVLLDLGVSSPQLDDAERGFSFMRDGPLDMRMDNSQGQTAAQWLARAEIEDMAWVFKTYGEEKN ARHIARCIAADRDKTPFLRTKDLADLIARITKSKERNKHPATRVFQAIRIYINSELDQIDQALEGAVNVLAPQGRLSVIS FHSLEDRIVKRFIRRHSQGESVPHGFPVTEDQINKSRKLRAVGKAIMPSDEEIERNARARSSVLRIAERLDY
Specific function: Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
COG id: COG0275
COG function: function code M; Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. RsmH family
Homologues:
Organism=Homo sapiens, GI165377209, Length=341, Percent_Identity=38.1231671554252, Blast_Score=191, Evalue=1e-48, Organism=Homo sapiens, GI165377202, Length=194, Percent_Identity=39.6907216494845, Blast_Score=127, Evalue=1e-29, Organism=Escherichia coli, GI1786270, Length=314, Percent_Identity=64.968152866242, Blast_Score=418, Evalue=1e-118, Organism=Drosophila melanogaster, GI62472493, Length=327, Percent_Identity=38.2262996941896, Blast_Score=187, Evalue=6e-48, Organism=Drosophila melanogaster, GI28571637, Length=327, Percent_Identity=38.2262996941896, Blast_Score=187, Evalue=6e-48,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): RSMH_SHEB2 (B8E4L2)
Other databases:
- EMBL: CP001252 - RefSeq: YP_002356376.1 - ProteinModelPortal: B8E4L2 - SMR: B8E4L2 - GeneID: 7089557 - GenomeReviews: CP001252_GR - KEGG: sbp:Sbal223_0419 - HOGENOM: HBG302779 - OMA: PQLDDPE - ProtClustDB: PRK00050 - GO: GO:0005737 - HAMAP: MF_01007 - InterPro: IPR002903 - PANTHER: PTHR11265 - PIRSF: PIRSF004486 - TIGRFAMs: TIGR00006
Pfam domain/function: PF01795 Methyltransf_5
EC number: NA
Molecular weight: Translated: 35031; Mature: 34900
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: BINDING 55-55 BINDING 80-80 BINDING 102-102 BINDING 109-109
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQEFAHLSVLLAETVGGLNIKDDGIYIDGTFGRGGHSRQVLQQLGENGRLIAIDRDPQA CCCHHHHHHHHHHHHHCCCCEECCCEEEECCCCCCCCHHHHHHHHCCCCCEEEECCCCHH IEAAKQFADDPRFQIVHGGFGQLADYVEELGLVGKIDGVLLDLGVSSPQLDDAERGFSFM HHHHHHHCCCCCEEEEECCHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCHHHCHHHH RDGPLDMRMDNSQGQTAAQWLARAEIEDMAWVFKTYGEEKNARHIARCIAADRDKTPFLR CCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCC TKDLADLIARITKSKERNKHPATRVFQAIRIYINSELDQIDQALEGAVNVLAPQGRLSVI HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEE SFHSLEDRIVKRFIRRHSQGESVPHGFPVTEDQINKSRKLRAVGKAIMPSDEEIERNARA EHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH RSSVLRIAERLDY HHHHHHHHHHHCC >Mature Secondary Structure SQEFAHLSVLLAETVGGLNIKDDGIYIDGTFGRGGHSRQVLQQLGENGRLIAIDRDPQA CCHHHHHHHHHHHHHCCCCEECCCEEEECCCCCCCCHHHHHHHHCCCCCEEEECCCCHH IEAAKQFADDPRFQIVHGGFGQLADYVEELGLVGKIDGVLLDLGVSSPQLDDAERGFSFM HHHHHHHCCCCCEEEEECCHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCHHHCHHHH RDGPLDMRMDNSQGQTAAQWLARAEIEDMAWVFKTYGEEKNARHIARCIAADRDKTPFLR CCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCC TKDLADLIARITKSKERNKHPATRVFQAIRIYINSELDQIDQALEGAVNVLAPQGRLSVI HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEE SFHSLEDRIVKRFIRRHSQGESVPHGFPVTEDQINKSRKLRAVGKAIMPSDEEIERNARA EHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH RSSVLRIAERLDY HHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA