| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
Click here to switch to the map view.
The map label for this gene is 160873435
Identifier: 160873435
GI number: 160873435
Start: 352367
End: 353038
Strand: Direct
Name: 160873435
Synonym: Sbal195_0310
Alternate gene names: NA
Gene position: 352367-353038 (Clockwise)
Preceding gene: 160873434
Following gene: 160873437
Centisome position: 6.59
GC content: 40.18
Gene sequence:
>672_bases ATGAACAGAAGTAATAAAGGATTTATTATTGCGATAGCAGTCAGTTTTAGCACTATGTTGGCTGGCTGCGGCGAAAGTTC AGATGAGCTAGATGACAAGCTGACGCATACAGCAGACTTGTATTTCATCAATTCACTGCCCTATATGGCAGATTTTTATG TTGATAAACGAAATATAAGCACTGGTTACTCAGGATTGTTTGACAGTAATAATCTAGTTTCGGCGGATGTTAACACCAAT GATATCGGCAGTGCCTACACCTATAGCTACAAAGCCATTAACAATATGATTAACTTAGGTGTGAAAGACAGCGTTAACGT TAATAAAGAAGAGCGTACTACGACAACCTTAAAAAATAGCGATGATCTTTGGGTCATCGCATGGGAAGCGTCAGGCGAAA GGCTACTGTCAGTTATAGACAAAAAGTCCAACAACACCGCCGATGTCTTCAATGTTCGTGTGTTTGCGAATGACAGCTAC GATGTTTCTGTTGACGGTGTGAAAATATTGACCACAGAAAAAGGTAAAGTGACAGAGTATCTGAGTATAAATCATTGTGT CGATGGTCTTAAAGTTGCGGGTAGGGCGATAGATTTATGTGCTGCGAATATAGGAGGTACTTATTTATTGGTGGTCGATA ACAATGGAAAACGTGTGATGGCAGAGGAATAG
Upstream 100 bases:
>100_bases AATGTCATCATTAATTATTTTTTCTAACAAAATAATAAGGTAGAGATCAATGGCGATAAAAATGTTAAACCGCAAATTAA TGTTGGGACTTAGAGATATT
Downstream 100 bases:
>100_bases TTGGCAAGGATGCCATAGCTAATTGTTCACTACATAGCCTCCTACTGATTGCTTTATTTAAGCATTCGTCAGGAGGCCGT TATGTGTCCCCACTTAATTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 223; Mature: 223
Protein sequence:
>223_residues MNRSNKGFIIAIAVSFSTMLAGCGESSDELDDKLTHTADLYFINSLPYMADFYVDKRNISTGYSGLFDSNNLVSADVNTN DIGSAYTYSYKAINNMINLGVKDSVNVNKEERTTTTLKNSDDLWVIAWEASGERLLSVIDKKSNNTADVFNVRVFANDSY DVSVDGVKILTTEKGKVTEYLSINHCVDGLKVAGRAIDLCAANIGGTYLLVVDNNGKRVMAEE
Sequences:
>Translated_223_residues MNRSNKGFIIAIAVSFSTMLAGCGESSDELDDKLTHTADLYFINSLPYMADFYVDKRNISTGYSGLFDSNNLVSADVNTN DIGSAYTYSYKAINNMINLGVKDSVNVNKEERTTTTLKNSDDLWVIAWEASGERLLSVIDKKSNNTADVFNVRVFANDSY DVSVDGVKILTTEKGKVTEYLSINHCVDGLKVAGRAIDLCAANIGGTYLLVVDNNGKRVMAEE >Mature_223_residues MNRSNKGFIIAIAVSFSTMLAGCGESSDELDDKLTHTADLYFINSLPYMADFYVDKRNISTGYSGLFDSNNLVSADVNTN DIGSAYTYSYKAINNMINLGVKDSVNVNKEERTTTTLKNSDDLWVIAWEASGERLLSVIDKKSNNTADVFNVRVFANDSY DVSVDGVKILTTEKGKVTEYLSINHCVDGLKVAGRAIDLCAANIGGTYLLVVDNNGKRVMAEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24406; Mature: 24406
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRSNKGFIIAIAVSFSTMLAGCGESSDELDDKLTHTADLYFINSLPYMADFYVDKRNIS CCCCCCCEEEEEEEEHHHHHHCCCCCCHHHHHHHCCEEEEEEECCCCCEEEEEEECCCCC TGYSGLFDSNNLVSADVNTNDIGSAYTYSYKAINNMINLGVKDSVNVNKEERTTTTLKNS CCCCCCCCCCCEEEECCCCCCCCCEEEEEHHHHHHHHCCCCCCCCCCCCCCCEEEEECCC DDLWVIAWEASGERLLSVIDKKSNNTADVFNVRVFANDSYDVSVDGVKILTTEKGKVTEY CCEEEEEEECCCHHHHHHHHCCCCCCEEEEEEEEEECCCEEEEECCEEEEEECCCCEEEE LSINHCVDGLKVAGRAIDLCAANIGGTYLLVVDNNGKRVMAEE EEHHHHHCCHHHCCEEEEEEEECCCCEEEEEEECCCCEEEECC >Mature Secondary Structure MNRSNKGFIIAIAVSFSTMLAGCGESSDELDDKLTHTADLYFINSLPYMADFYVDKRNIS CCCCCCCEEEEEEEEHHHHHHCCCCCCHHHHHHHCCEEEEEEECCCCCEEEEEEECCCCC TGYSGLFDSNNLVSADVNTNDIGSAYTYSYKAINNMINLGVKDSVNVNKEERTTTTLKNS CCCCCCCCCCCEEEECCCCCCCCCEEEEEHHHHHHHHCCCCCCCCCCCCCCCEEEEECCC DDLWVIAWEASGERLLSVIDKKSNNTADVFNVRVFANDSYDVSVDGVKILTTEKGKVTEY CCEEEEEEECCCHHHHHHHHCCCCCCEEEEEEEEEECCCEEEEECCEEEEEECCCCEEEE LSINHCVDGLKVAGRAIDLCAANIGGTYLLVVDNNGKRVMAEE EEHHHHHCCHHHCCEEEEEEEECCCCEEEEEEECCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA