| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is rstB [H]
Identifier: 160873433
GI number: 160873433
Start: 349604
End: 351211
Strand: Direct
Name: rstB [H]
Synonym: Sbal195_0308
Alternate gene names: 160873433
Gene position: 349604-351211 (Clockwise)
Preceding gene: 160873431
Following gene: 160873434
Centisome position: 6.54
GC content: 43.22
Gene sequence:
>1608_bases ATGAAAAAATCATTATTATCTTTGGCTATTATCGTTATTTTGTCAGTGGTGGGTATTCAGCTATTTATCATTCCGCTGTT TGAAAATAAAGTCAGGCATCCGACCGAGAAGTGGGCGCTGGAGTTGTTGACATCAGGTACGGCCAATATGCTTGCAGTGC AATTACAGCGGTTGCCGAAGCAAGACAGGGCTGCCTATTTACAGAATATGCAGGCTAATTTTGGCTATGAACTTGCAGTG CAAGACTATCAGCGGGATGACTTTTCAATTGTGCAGCAGCAATGGATTGATCAGAATAACGTCGTTGGCGAGCCGTTAAC GGATTTAGTCTACCGAAGAATCGACGCCGATCAGCTGTTGGTGGTAATCAAACCTAATACCGTACCTAAATATTTAGTCA ATGATGCTCAGCGTTGGAGTATGGGCGTATTTTATCTTATTACTCATGCGTTAAATAAGCAGCCAGAAAATAACTGGCAC TCGATAATTGCTGTCATCAATGAGGATTTTGCCTACCCAGTGACATTGCAGTCACTTGGCGAGATACACGAAAATGATGA GCAGATGAGTGACTTATATGCAGGACGCATTATTGCGCTGTCTACTGCGGACTCTGATGCGATTGGCTACCCAGCAGACA GGGTGATGCAACGTATTGGCAGCAGCGACAAGGTGATTGTTCTAGGACCATTCAGCACTGAGTTAAAGCCTAAGGTGCAG TACATGTTAAGTATCTTTTATTTGATATTTGGCTTGTCGCTGTTAGTGCCGATTATCGTGTGGCTGATACCTGCGTGGCG CTCTATGTTAAGCCTGAATAAGGTCGCGATATTACTGGGGAAAGGCCATTTTGATACGCGTGCTAAATTTATTCATTTTA GCCATTTAAATCACTTGTCCAACACCATTAATATTATGGCGGAGAAAATTCAGCGATTAATTTCCTCACATAAAAATCTT GTAAATGCCGTCTCTCACGAATTACGCACACCTATCGCTCGGATAGAGTTTAATATTGAAATGCTGAGAAATAATACTCA GGATAATAATCAATTGACGCAACTAGATCGTATAGAGTTTTCATTAAATGAGTTAAATTCATTAGTGTCGGAAATGCTTG AACATGCGCGGTTTGATAGCGAAATACCGACACTGACATTTGAGTCAATTGAGCTCAACCACTGGCTAAGACAAGAGTTA CTGCTGTGGCAAGAGGCTAACCCAACGATAGTCATCACTTTGCTTGGGCATGATGAATGCTTGGCAAGATTCGATAGGTT TTACATGAGCCGCGCCATCAGTAATTTAGTCCGAAATGCCATTGCCTATGGGCAAAGCCAGATCCACGTCGGCTACCAAA AAACAGCAAAAGGGTGGATGGTTTTCATTGAAGATGATGGTTATGGTGTGCCTTTGGCCTCCAGAGATAAAGTGTTTGAG CCGTTTTATCGAGACGATGAAAGCCGCAATCTGCAAAAGAGTGGGACAGGATTAGGCCTAGCCATTGTCAAGCAAATCAT AGATTGGCATAGCGGTTCGGCGAGCGTTAACGCGTCAGCTTTAGGAGGCGCTCGTTTTGTCCTCAGTTGGCCAGACAAGA AGTTATGA
Upstream 100 bases:
>100_bases GTGATAGATGAATAGCGACAACCCTTCCAATAGATTGTTTTCATTTTTGCATTGTTATTGAAATACCACTTTTCGAATAT TTTTTCGTTATAGGCTACGT
Downstream 100 bases:
>100_bases CGTATAGCAGGTTAAGGAGTAGGCGATAATGAAAACCAAAATTCTCATTGTAGAGGATGATTTGCCTTTAGCTGAGTCTA TTCAGGAGTACCTTAACTAT
Product: integral membrane sensor signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 535; Mature: 535
Protein sequence:
>535_residues MKKSLLSLAIIVILSVVGIQLFIIPLFENKVRHPTEKWALELLTSGTANMLAVQLQRLPKQDRAAYLQNMQANFGYELAV QDYQRDDFSIVQQQWIDQNNVVGEPLTDLVYRRIDADQLLVVIKPNTVPKYLVNDAQRWSMGVFYLITHALNKQPENNWH SIIAVINEDFAYPVTLQSLGEIHENDEQMSDLYAGRIIALSTADSDAIGYPADRVMQRIGSSDKVIVLGPFSTELKPKVQ YMLSIFYLIFGLSLLVPIIVWLIPAWRSMLSLNKVAILLGKGHFDTRAKFIHFSHLNHLSNTINIMAEKIQRLISSHKNL VNAVSHELRTPIARIEFNIEMLRNNTQDNNQLTQLDRIEFSLNELNSLVSEMLEHARFDSEIPTLTFESIELNHWLRQEL LLWQEANPTIVITLLGHDECLARFDRFYMSRAISNLVRNAIAYGQSQIHVGYQKTAKGWMVFIEDDGYGVPLASRDKVFE PFYRDDESRNLQKSGTGLGLAIVKQIIDWHSGSASVNASALGGARFVLSWPDKKL
Sequences:
>Translated_535_residues MKKSLLSLAIIVILSVVGIQLFIIPLFENKVRHPTEKWALELLTSGTANMLAVQLQRLPKQDRAAYLQNMQANFGYELAV QDYQRDDFSIVQQQWIDQNNVVGEPLTDLVYRRIDADQLLVVIKPNTVPKYLVNDAQRWSMGVFYLITHALNKQPENNWH SIIAVINEDFAYPVTLQSLGEIHENDEQMSDLYAGRIIALSTADSDAIGYPADRVMQRIGSSDKVIVLGPFSTELKPKVQ YMLSIFYLIFGLSLLVPIIVWLIPAWRSMLSLNKVAILLGKGHFDTRAKFIHFSHLNHLSNTINIMAEKIQRLISSHKNL VNAVSHELRTPIARIEFNIEMLRNNTQDNNQLTQLDRIEFSLNELNSLVSEMLEHARFDSEIPTLTFESIELNHWLRQEL LLWQEANPTIVITLLGHDECLARFDRFYMSRAISNLVRNAIAYGQSQIHVGYQKTAKGWMVFIEDDGYGVPLASRDKVFE PFYRDDESRNLQKSGTGLGLAIVKQIIDWHSGSASVNASALGGARFVLSWPDKKL >Mature_535_residues MKKSLLSLAIIVILSVVGIQLFIIPLFENKVRHPTEKWALELLTSGTANMLAVQLQRLPKQDRAAYLQNMQANFGYELAV QDYQRDDFSIVQQQWIDQNNVVGEPLTDLVYRRIDADQLLVVIKPNTVPKYLVNDAQRWSMGVFYLITHALNKQPENNWH SIIAVINEDFAYPVTLQSLGEIHENDEQMSDLYAGRIIALSTADSDAIGYPADRVMQRIGSSDKVIVLGPFSTELKPKVQ YMLSIFYLIFGLSLLVPIIVWLIPAWRSMLSLNKVAILLGKGHFDTRAKFIHFSHLNHLSNTINIMAEKIQRLISSHKNL VNAVSHELRTPIARIEFNIEMLRNNTQDNNQLTQLDRIEFSLNELNSLVSEMLEHARFDSEIPTLTFESIELNHWLRQEL LLWQEANPTIVITLLGHDECLARFDRFYMSRAISNLVRNAIAYGQSQIHVGYQKTAKGWMVFIEDDGYGVPLASRDKVFE PFYRDDESRNLQKSGTGLGLAIVKQIIDWHSGSASVNASALGGARFVLSWPDKKL
Specific function: Member of the two-component regulatory system rstB/rstA. RstB functions as a membrane-associated protein kinase that phosphorylates rstA (Potential) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1787894, Length=393, Percent_Identity=31.8066157760814, Blast_Score=197, Evalue=9e-52, Organism=Escherichia coli, GI1790346, Length=241, Percent_Identity=31.9502074688797, Blast_Score=127, Evalue=1e-30, Organism=Escherichia coli, GI1789808, Length=290, Percent_Identity=28.9655172413793, Blast_Score=114, Evalue=1e-26, Organism=Escherichia coli, GI1786783, Length=243, Percent_Identity=28.8065843621399, Blast_Score=88, Evalue=1e-18, Organism=Escherichia coli, GI1788549, Length=256, Percent_Identity=27.34375, Blast_Score=85, Evalue=2e-17, Organism=Escherichia coli, GI1786600, Length=231, Percent_Identity=25.974025974026, Blast_Score=82, Evalue=1e-16, Organism=Escherichia coli, GI145693157, Length=252, Percent_Identity=27.3809523809524, Blast_Score=82, Evalue=1e-16, Organism=Escherichia coli, GI1788393, Length=269, Percent_Identity=26.0223048327138, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1786912, Length=245, Percent_Identity=25.3061224489796, Blast_Score=74, Evalue=3e-14, Organism=Escherichia coli, GI1790436, Length=222, Percent_Identity=29.2792792792793, Blast_Score=73, Evalue=5e-14, Organism=Escherichia coli, GI87081816, Length=258, Percent_Identity=24.031007751938, Blast_Score=70, Evalue=4e-13, Organism=Escherichia coli, GI87082128, Length=247, Percent_Identity=23.8866396761134, Blast_Score=67, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 60957; Mature: 60957
Theoretical pI: Translated: 6.57; Mature: 6.57
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKSLLSLAIIVILSVVGIQLFIIPLFENKVRHPTEKWALELLTSGTANMLAVQLQRLPK CCHHHHHHHHHHHHHHHHHHHEEEEHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCC QDRAAYLQNMQANFGYELAVQDYQRDDFSIVQQQWIDQNNVVGEPLTDLVYRRIDADQLL HHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCEE VVIKPNTVPKYLVNDAQRWSMGVFYLITHALNKQPENNWHSIIAVINEDFAYPVTLQSLG EEECCCCCHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHEEEEEECCCCCCEEHHHHH EIHENDEQMSDLYAGRIIALSTADSDAIGYPADRVMQRIGSSDKVIVLGPFSTELKPKVQ HHHCCHHHHHHHHCCEEEEEECCCCCCCCCCHHHHHHHCCCCCCEEEECCCCCCCCHHHH YMLSIFYLIFGLSLLVPIIVWLIPAWRSMLSLNKVAILLGKGHFDTRAKFIHFSHLNHLS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHEEEHHHHHHHH NTINIMAEKIQRLISSHKNLVNAVSHELRTPIARIEFNIEMLRNNTQDNNQLTQLDRIEF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEEHHHHHCCCCCCCHHHHHHHHHH SLNELNSLVSEMLEHARFDSEIPTLTFESIELNHWLRQELLLWQEANPTIVITLLGHDEC HHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHHCCCCCEEEEEEECCHHH LARFDRFYMSRAISNLVRNAIAYGQSQIHVGYQKTAKGWMVFIEDDGYGVPLASRDKVFE HHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHCCCCCEEEEEECCCCCCCCCCCCCCCC PFYRDDESRNLQKSGTGLGLAIVKQIIDWHSGSASVNASALGGARFVLSWPDKKL CHHCCCCCCCHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHCCCEEEEEECCCCCC >Mature Secondary Structure MKKSLLSLAIIVILSVVGIQLFIIPLFENKVRHPTEKWALELLTSGTANMLAVQLQRLPK CCHHHHHHHHHHHHHHHHHHHEEEEHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCC QDRAAYLQNMQANFGYELAVQDYQRDDFSIVQQQWIDQNNVVGEPLTDLVYRRIDADQLL HHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCEE VVIKPNTVPKYLVNDAQRWSMGVFYLITHALNKQPENNWHSIIAVINEDFAYPVTLQSLG EEECCCCCHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHEEEEEECCCCCCEEHHHHH EIHENDEQMSDLYAGRIIALSTADSDAIGYPADRVMQRIGSSDKVIVLGPFSTELKPKVQ HHHCCHHHHHHHHCCEEEEEECCCCCCCCCCHHHHHHHCCCCCCEEEECCCCCCCCHHHH YMLSIFYLIFGLSLLVPIIVWLIPAWRSMLSLNKVAILLGKGHFDTRAKFIHFSHLNHLS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHEEEHHHHHHHH NTINIMAEKIQRLISSHKNLVNAVSHELRTPIARIEFNIEMLRNNTQDNNQLTQLDRIEF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEEHHHHHCCCCCCCHHHHHHHHHH SLNELNSLVSEMLEHARFDSEIPTLTFESIELNHWLRQELLLWQEANPTIVITLLGHDEC HHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHHCCCCCEEEEEEECCHHH LARFDRFYMSRAISNLVRNAIAYGQSQIHVGYQKTAKGWMVFIEDDGYGVPLASRDKVFE HHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHCCCCCEEEEEECCCCCCCCCCCCCCCC PFYRDDESRNLQKSGTGLGLAIVKQIIDWHSGSASVNASALGGARFVLSWPDKKL CHHCCCCCCCHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503; 2646639; 1925016; 1495392 [H]