| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is fieF [H]
Identifier: 160873389
GI number: 160873389
Start: 302549
End: 303439
Strand: Direct
Name: fieF [H]
Synonym: Sbal195_0263
Alternate gene names: 160873389
Gene position: 302549-303439 (Clockwise)
Preceding gene: 160873388
Following gene: 160873390
Centisome position: 5.66
GC content: 47.7
Gene sequence:
>891_bases ATGACTCAGACTTCCCAATACGATTTTTGGGTCAAACTGGCTAGCCGCGCTTCCGTGGCTACCGCTTTGATCCTTATTCT TATCAAGATGTTCGCTTGGCTTTATTCCGGCTCTGCCAGTATGTTGGCATCTTTGACGGATTCCTTTGCCGACGCACTCG CTTCCATCATCAACTTTATTGCAATTCGTTACGCGCTTGTGCCGCCGGATCATGACCACAGATATGGTCATGGTAAGGCT GAGCCGTTAGCGTCTTTAGCGCAATCCGCTTTTATTATGGGCTCCGCCTTCTTATTGCTTTTCTATGGTGGCGAGCGGTT ATTAACGCCCGTTCCCGTCGAAAATGCCACCATAGGTGTGGTGGTTTCTGTTATCGCGATTATTATGACGTTAGCTTTAG TGACGTTGCAAAAACGCGCATTAGCGGCGACAAAAAGCACTGTGGTCGAAGCCGATTCACTGCATTACAAGTCGGACTTA TTCCTCAATGGCGCGGTACTGTTAGCACTCGTCCTATCCCAGTATGGTTGGTGGTGGGCTGACGGTTTGTTTGCAGTAAT GATTGCATTCTATATTGGTCATCAAGCCTTTGGATTAGGCTATCGCTCAATTCAAGCCTTGCTAGATCGGGAGTTGGACG AAGAAACTCGCCAGCAAATCACGCAAATCGCAATGGAAGATCCACGGGTACAAGGGCTGCATGACTTGCGTACTCGTCAG GCTGGCAAAACCGTTTTTATCCAATTCCATTTAGAGCTTGATGGCAATCTGAGTTTGAATGAAGCCCACAGTATTGCCGA TACGACAGGGATAAAGGTCAAGGCCGCCTTTGAAGATGCCGAGGTGATTATTCACCAAGATCCAGTCAAACCTGAAGTCA ACGAAACATAA
Upstream 100 bases:
>100_bases GTTTAAAGCGCGATTTGAAGCACAAGCTGGTAAAGAACCTCGCGGTTAAGTGTCTTAGCTGATATACAATAGGGTCATAG CTTCCCAATATAGATCCCTT
Downstream 100 bases:
>100_bases AGTAAGGGCAAGCGATGGCATGGATGCAGAAGCAAGGTCACAGATGGGATCATTCCACTCGATTGATATGTCGCTATCAG AGGCTATCGACTCGCTTTGA
Product: cation diffusion facilitator family transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 296; Mature: 295
Protein sequence:
>296_residues MTQTSQYDFWVKLASRASVATALILILIKMFAWLYSGSASMLASLTDSFADALASIINFIAIRYALVPPDHDHRYGHGKA EPLASLAQSAFIMGSAFLLLFYGGERLLTPVPVENATIGVVVSVIAIIMTLALVTLQKRALAATKSTVVEADSLHYKSDL FLNGAVLLALVLSQYGWWWADGLFAVMIAFYIGHQAFGLGYRSIQALLDRELDEETRQQITQIAMEDPRVQGLHDLRTRQ AGKTVFIQFHLELDGNLSLNEAHSIADTTGIKVKAAFEDAEVIIHQDPVKPEVNET
Sequences:
>Translated_296_residues MTQTSQYDFWVKLASRASVATALILILIKMFAWLYSGSASMLASLTDSFADALASIINFIAIRYALVPPDHDHRYGHGKA EPLASLAQSAFIMGSAFLLLFYGGERLLTPVPVENATIGVVVSVIAIIMTLALVTLQKRALAATKSTVVEADSLHYKSDL FLNGAVLLALVLSQYGWWWADGLFAVMIAFYIGHQAFGLGYRSIQALLDRELDEETRQQITQIAMEDPRVQGLHDLRTRQ AGKTVFIQFHLELDGNLSLNEAHSIADTTGIKVKAAFEDAEVIIHQDPVKPEVNET >Mature_295_residues TQTSQYDFWVKLASRASVATALILILIKMFAWLYSGSASMLASLTDSFADALASIINFIAIRYALVPPDHDHRYGHGKAE PLASLAQSAFIMGSAFLLLFYGGERLLTPVPVENATIGVVVSVIAIIMTLALVTLQKRALAATKSTVVEADSLHYKSDLF LNGAVLLALVLSQYGWWWADGLFAVMIAFYIGHQAFGLGYRSIQALLDRELDEETRQQITQIAMEDPRVQGLHDLRTRQA GKTVFIQFHLELDGNLSLNEAHSIADTTGIKVKAAFEDAEVIIHQDPVKPEVNET
Specific function: Cation-efflux transporter that may have a role in detoxification [H]
COG id: COG0053
COG function: function code P; Predicted Co/Zn/Cd cation transporters
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. FieF subfamily [H]
Homologues:
Organism=Homo sapiens, GI57164948, Length=252, Percent_Identity=26.5873015873016, Blast_Score=69, Evalue=7e-12, Organism=Escherichia coli, GI1790349, Length=267, Percent_Identity=49.812734082397, Blast_Score=272, Evalue=2e-74, Organism=Caenorhabditis elegans, GI115533508, Length=268, Percent_Identity=25, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI115533506, Length=268, Percent_Identity=25, Blast_Score=66, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002524 [H]
Pfam domain/function: PF01545 Cation_efflux [H]
EC number: NA
Molecular weight: Translated: 32538; Mature: 32407
Theoretical pI: Translated: 5.53; Mature: 5.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQTSQYDFWVKLASRASVATALILILIKMFAWLYSGSASMLASLTDSFADALASIINFI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH AIRYALVPPDHDHRYGHGKAEPLASLAQSAFIMGSAFLLLFYGGERLLTPVPVENATIGV HHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCEEECCCCCCCCHHHH VVSVIAIIMTLALVTLQKRALAATKSTVVEADSLHYKSDLFLNGAVLLALVLSQYGWWWA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHH DGLFAVMIAFYIGHQAFGLGYRSIQALLDRELDEETRQQITQIAMEDPRVQGLHDLRTRQ HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHC AGKTVFIQFHLELDGNLSLNEAHSIADTTGIKVKAAFEDAEVIIHQDPVKPEVNET CCCEEEEEEEEEECCCCCHHHHHHHHHCCCCEEEEECCCCEEEEECCCCCCCCCCC >Mature Secondary Structure TQTSQYDFWVKLASRASVATALILILIKMFAWLYSGSASMLASLTDSFADALASIINFI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH AIRYALVPPDHDHRYGHGKAEPLASLAQSAFIMGSAFLLLFYGGERLLTPVPVENATIGV HHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCEEECCCCCCCCHHHH VVSVIAIIMTLALVTLQKRALAATKSTVVEADSLHYKSDLFLNGAVLLALVLSQYGWWWA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHH DGLFAVMIAFYIGHQAFGLGYRSIQALLDRELDEETRQQITQIAMEDPRVQGLHDLRTRQ HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHC AGKTVFIQFHLELDGNLSLNEAHSIADTTGIKVKAAFEDAEVIIHQDPVKPEVNET CCCEEEEEEEEEECCCCCHHHHHHHHHCCCCEEEEECCCCEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA