| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is spy [H]
Identifier: 160873388
GI number: 160873388
Start: 301973
End: 302497
Strand: Direct
Name: spy [H]
Synonym: Sbal195_0262
Alternate gene names: 160873388
Gene position: 301973-302497 (Clockwise)
Preceding gene: 160873385
Following gene: 160873389
Centisome position: 5.65
GC content: 47.81
Gene sequence:
>525_bases ATGAAAACATTATCACCTTTGAAAGCGAGCTTGTTTGCCATTCTAGCGAGTTCTGCGGTTTTAGCGACAACAGTCAATGC CGAACCTACAGACGGTGGCTGTGATTTCTCCCGTTCTGAATTCCATAAAGGCGACCGCATGATGGGCGACCGTATGGAAC ATGGCGGCCGACACATGGATAAGCGTGGCATGCATCGTATGTTTGAAGGGCTAGATTTAACTGATGCTCAAAGAGCTGAC ATCAAAAAGCTATTCGCCGATCAGAAAACTGCGCGAGCCGATAGCCGCCCAACGAAAGAACAGCGTTTGGCCCATCGCAC TGAGATGCAGGCTTTGATGACTGCACCTAATTTTGATGAAGTGCAAGCCAAGGCACTGATGAGCGCGCAGCAAGAACAGC GTCAAGCTCAAGCCATTGAACGCATGAAGTTACATAATCAAATATACAATTTGTTGACGCCAGAGCAGCAAGCTAAGTTT AAAGCGCGATTTGAAGCACAAGCTGGTAAAGAACCTCGCGGTTAA
Upstream 100 bases:
>100_bases GGGGTTTAGACTGGAAGGGTCGAAAGTGACTCGGCTTAAAAAGGTCGTCACTGTGTCTTATTACTTGCCATATTAAAGTT GAACCACTGAGGTTAACACT
Downstream 100 bases:
>100_bases GTGTCTTAGCTGATATACAATAGGGTCATAGCTTCCCAATATAGATCCCTTATGACTCAGACTTCCCAATACGATTTTTG GGTCAAACTGGCTAGCCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 174; Mature: 174
Protein sequence:
>174_residues MKTLSPLKASLFAILASSAVLATTVNAEPTDGGCDFSRSEFHKGDRMMGDRMEHGGRHMDKRGMHRMFEGLDLTDAQRAD IKKLFADQKTARADSRPTKEQRLAHRTEMQALMTAPNFDEVQAKALMSAQQEQRQAQAIERMKLHNQIYNLLTPEQQAKF KARFEAQAGKEPRG
Sequences:
>Translated_174_residues MKTLSPLKASLFAILASSAVLATTVNAEPTDGGCDFSRSEFHKGDRMMGDRMEHGGRHMDKRGMHRMFEGLDLTDAQRAD IKKLFADQKTARADSRPTKEQRLAHRTEMQALMTAPNFDEVQAKALMSAQQEQRQAQAIERMKLHNQIYNLLTPEQQAKF KARFEAQAGKEPRG >Mature_174_residues MKTLSPLKASLFAILASSAVLATTVNAEPTDGGCDFSRSEFHKGDRMMGDRMEHGGRHMDKRGMHRMFEGLDLTDAQRAD IKKLFADQKTARADSRPTKEQRLAHRTEMQALMTAPNFDEVQAKALMSAQQEQRQAQAIERMKLHNQIYNLLTPEQQAKF KARFEAQAGKEPRG
Specific function: Could be involved in zinc resistance or another aspect of zinc metabolism [H]
COG id: COG3678
COG function: function code UNTP; P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli CpxP [H]
Homologues:
Organism=Escherichia coli, GI1788039, Length=117, Percent_Identity=37.6068376068376, Blast_Score=73, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012899 [H]
Pfam domain/function: PF07813 LTXXQ [H]
EC number: NA
Molecular weight: Translated: 19633; Mature: 19633
Theoretical pI: Translated: 10.16; Mature: 10.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 6.3 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 6.3 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTLSPLKASLFAILASSAVLATTVNAEPTDGGCDFSRSEFHKGDRMMGDRMEHGGRHMD CCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHH KRGMHRMFEGLDLTDAQRADIKKLFADQKTARADSRPTKEQRLAHRTEMQALMTAPNFDE HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHH VQAKALMSAQQEQRQAQAIERMKLHNQIYNLLTPEQQAKFKARFEAQAGKEPRG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKTLSPLKASLFAILASSAVLATTVNAEPTDGGCDFSRSEFHKGDRMMGDRMEHGGRHMD CCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHH KRGMHRMFEGLDLTDAQRADIKKLFADQKTARADSRPTKEQRLAHRTEMQALMTAPNFDE HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHH VQAKALMSAQQEQRQAQAIERMKLHNQIYNLLTPEQQAKFKARFEAQAGKEPRG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9068658; 9097039; 9278503; 9694902 [H]