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The map label for this gene is hslR [H]

Identifier: 160873277

GI number: 160873277

Start: 179577

End: 179975

Strand: Reverse

Name: hslR [H]

Synonym: Sbal195_0151

Alternate gene names: 160873277

Gene position: 179975-179577 (Counterclockwise)

Preceding gene: 160873290

Following gene: 160873276

Centisome position: 3.37

GC content: 46.12

Gene sequence:

>399_bases
ATGACTCAAGGTCAAAGCGACAAAACAGACATTCGACTCGATAAGTGGCTTTGGGCTGCACGTTTCTATAAAACCCGTGC
CATCGCCAAAGAAATGATTAACGGCGGCAAAGTACATTACAACGGCCAGCGCGCCAAATCTAGTAGGAATGCCGAGATAG
GCGCCGTCCTTAAGATACGCCAAGGATATGACGATAAAGAGATCGTCATAAAAAAATTATCGCAATTACGCCAAAGTGGT
GCGATTGCACAAGAATTGTACGAAGAAACCGCGACTAGTCTGGCCAAACGGGCCATTAATGCTGAGCAACGACGTCTCAA
CATGCTCAATAACCCGATACCCGATCAGAAACCAGATAAAAAGCAACGACGCCAGCTCATGCGCTTTAAAGACCTTTAA

Upstream 100 bases:

>100_bases
AAAGGGTGTGAAGCACGCCACCCTTTAACATAATAGAAATGCACTTTACGCATTTTCTTGCTCGGCATGTGAACTCATCG
ATCTTTTAGCTGGAGACACT

Downstream 100 bases:

>100_bases
CAGTGAGATACACGATGAACCAAGATACTTTACACCGCTACTTGTTCGACAATGCCGATGTACGTGGTGAACTGGTGCAG
TTACAAGACAGCTATCAACA

Product: RNA-binding S4 domain-containing protein

Products: NA

Alternate protein names: HSP15 [H]

Number of amino acids: Translated: 132; Mature: 131

Protein sequence:

>132_residues
MTQGQSDKTDIRLDKWLWAARFYKTRAIAKEMINGGKVHYNGQRAKSSRNAEIGAVLKIRQGYDDKEIVIKKLSQLRQSG
AIAQELYEETATSLAKRAINAEQRRLNMLNNPIPDQKPDKKQRRQLMRFKDL

Sequences:

>Translated_132_residues
MTQGQSDKTDIRLDKWLWAARFYKTRAIAKEMINGGKVHYNGQRAKSSRNAEIGAVLKIRQGYDDKEIVIKKLSQLRQSG
AIAQELYEETATSLAKRAINAEQRRLNMLNNPIPDQKPDKKQRRQLMRFKDL
>Mature_131_residues
TQGQSDKTDIRLDKWLWAARFYKTRAIAKEMINGGKVHYNGQRAKSSRNAEIGAVLKIRQGYDDKEIVIKKLSQLRQSGA
IAQELYEETATSLAKRAINAEQRRLNMLNNPIPDQKPDKKQRRQLMRFKDL

Specific function: Involved in the recycling of free 50S ribosomal subunits that still carry a nascent chain. Binds RNA more specifically than DNA. Binds with very high affinity to the free 50S ribosomal subunit. Does not bind it when it is part of the 70S ribosome [H]

COG id: COG1188

COG function: function code J; Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S4 RNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789803, Length=122, Percent_Identity=56.5573770491803, Blast_Score=150, Evalue=2e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002942 [H]

Pfam domain/function: PF01479 S4 [H]

EC number: NA

Molecular weight: Translated: 15302; Mature: 15171

Theoretical pI: Translated: 10.89; Mature: 10.89

Prosite motif: PS50889 S4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQGQSDKTDIRLDKWLWAARFYKTRAIAKEMINGGKVHYNGQRAKSSRNAEIGAVLKIR
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHCCCCCCCHHHHHHHC
QGYDDKEIVIKKLSQLRQSGAIAQELYEETATSLAKRAINAEQRRLNMLNNPIPDQKPDK
CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH
KQRRQLMRFKDL
HHHHHHHHHCCC
>Mature Secondary Structure 
TQGQSDKTDIRLDKWLWAARFYKTRAIAKEMINGGKVHYNGQRAKSSRNAEIGAVLKIR
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHCCCCCCCHHHHHHHC
QGYDDKEIVIKKLSQLRQSGAIAQELYEETATSLAKRAINAEQRRLNMLNNPIPDQKPDK
CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH
KQRRQLMRFKDL
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]