| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
Click here to switch to the map view.
The map label for this gene is ktrA [H]
Identifier: 160873181
GI number: 160873181
Start: 63887
End: 64585
Strand: Reverse
Name: ktrA [H]
Synonym: Sbal195_0055
Alternate gene names: 160873181
Gene position: 64585-63887 (Counterclockwise)
Preceding gene: 160873182
Following gene: 160873180
Centisome position: 1.21
GC content: 47.07
Gene sequence:
>699_bases ATGGCGCATTTTACCGTTATTGGATTAGGGCGATTTGGCGTCGCAGTGAGCCGAGAACTGATCCACTTAGGTCATACGGT TACAGGTGTCGATAATGACCATAAAGCTGTTGAAAAATATGTAGAAGTTCTTACAGAAGCCGTAATTTGCGATTGCGCCG ATGAGGCGTCACTAAGGGAACTCGATCTTGCCAGTAGCGAAGTTGTGATTGTCGCTATCGGTTTTGATATGCAATCGAGC CTGCTGTGCACACTGGCACTGAAAAATCTCGGCGTGCAAAATATTTGGGTTAAAGCCAGTAATAAGGCGCACCACACCAT ATTGTCTAAACTCGATGTTACTCGGATTATCCACCCTGAAGAAGATATGGGGGTCCGCGTCGCCCAGTCGCTAAACTATC CCATGGTGAATAACTTTCTCGCCATCGGCGATGGGCTCTATATTGTTGAAATCCATATTAAAACCCATTTGCATCAAGCC ACTGTTGGCCAACTGCTGGGGAGCTTGCAAGAGAAAAACACTGATGAGCAAACTAACGTGCAACGCAGCCCTAAGGGCAA AGTCGCGCCGTTAATGGTCAAACGAGAGCAAAGTGTATTTAGCAAGATTGATAGCGATTTTACCTTGCACACAGAAGATG CCCTATTCCTCTGCGGTAGCCGTGCCGAGTTAAAACAGCTCGCGCCAAGGTTGGTGTAA
Upstream 100 bases:
>100_bases TCAAGACAGAAGCGGGACTCGGCTATCGCTTGACTGACATGAGTCAAAAATAACGTTTTTATCATCAACACTTTCAAAAA AATCGTAAAAGGATGTTTGT
Downstream 100 bases:
>100_bases GGTGGTTCAATGGCATCCTTCGCTCACCCTAGAGCCCCCCCCTAAAACCGGCAAAAAACTCTTTGGCGCGCCGCCCTTTA TCTTAAGTGCAAGCTTTGCT
Product: TrkA domain-containing protein
Products: NA
Alternate protein names: K(+)-uptake protein ktrA [H]
Number of amino acids: Translated: 232; Mature: 231
Protein sequence:
>232_residues MAHFTVIGLGRFGVAVSRELIHLGHTVTGVDNDHKAVEKYVEVLTEAVICDCADEASLRELDLASSEVVIVAIGFDMQSS LLCTLALKNLGVQNIWVKASNKAHHTILSKLDVTRIIHPEEDMGVRVAQSLNYPMVNNFLAIGDGLYIVEIHIKTHLHQA TVGQLLGSLQEKNTDEQTNVQRSPKGKVAPLMVKREQSVFSKIDSDFTLHTEDALFLCGSRAELKQLAPRLV
Sequences:
>Translated_232_residues MAHFTVIGLGRFGVAVSRELIHLGHTVTGVDNDHKAVEKYVEVLTEAVICDCADEASLRELDLASSEVVIVAIGFDMQSS LLCTLALKNLGVQNIWVKASNKAHHTILSKLDVTRIIHPEEDMGVRVAQSLNYPMVNNFLAIGDGLYIVEIHIKTHLHQA TVGQLLGSLQEKNTDEQTNVQRSPKGKVAPLMVKREQSVFSKIDSDFTLHTEDALFLCGSRAELKQLAPRLV >Mature_231_residues AHFTVIGLGRFGVAVSRELIHLGHTVTGVDNDHKAVEKYVEVLTEAVICDCADEASLRELDLASSEVVIVAIGFDMQSSL LCTLALKNLGVQNIWVKASNKAHHTILSKLDVTRIIHPEEDMGVRVAQSLNYPMVNNFLAIGDGLYIVEIHIKTHLHQAT VGQLLGSLQEKNTDEQTNVQRSPKGKVAPLMVKREQSVFSKIDSDFTLHTEDALFLCGSRAELKQLAPRLV
Specific function: Catalytic subunit of the ktrAB potassium uptake transporter. The 2 major potassium transporter complexes KtrAB and ktrCD confer resistance to both suddenly imposed and prolonged osmotic stress [H]
COG id: COG0569
COG function: function code P; K+ transport systems, NAD-binding component
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein; Cytoplasmic side [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 RCK N-terminal domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR006037 - InterPro: IPR003148 [H]
Pfam domain/function: PF02080 TrkA_C; PF02254 TrkA_N [H]
EC number: NA
Molecular weight: Translated: 25530; Mature: 25399
Theoretical pI: Translated: 6.43; Mature: 6.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHFTVIGLGRFGVAVSRELIHLGHTVTGVDNDHKAVEKYVEVLTEAVICDCADEASLRE CCEEEEEECCHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHH LDLASSEVVIVAIGFDMQSSLLCTLALKNLGVQNIWVKASNKAHHTILSKLDVTRIIHPE HCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHEEECCC EDMGVRVAQSLNYPMVNNFLAIGDGLYIVEIHIKTHLHQATVGQLLGSLQEKNTDEQTNV CCCCHHHHHHCCCCHHHCEEEECCCEEEEEEEEEHHHHHHHHHHHHHHHHHCCCCCHHCC QRSPKGKVAPLMVKREQSVFSKIDSDFTLHTEDALFLCGSRAELKQLAPRLV CCCCCCCCCCEEEEHHHHHHHHCCCCEEEECCCEEEEECCHHHHHHHCCCCC >Mature Secondary Structure AHFTVIGLGRFGVAVSRELIHLGHTVTGVDNDHKAVEKYVEVLTEAVICDCADEASLRE CEEEEEECCHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHH LDLASSEVVIVAIGFDMQSSLLCTLALKNLGVQNIWVKASNKAHHTILSKLDVTRIIHPE HCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHEEECCC EDMGVRVAQSLNYPMVNNFLAIGDGLYIVEIHIKTHLHQATVGQLLGSLQEKNTDEQTNV CCCCHHHHHHCCCCHHHCEEEECCCEEEEEEEEEHHHHHHHHHHHHHHHHHCCCCCHHCC QRSPKGKVAPLMVKREQSVFSKIDSDFTLHTEDALFLCGSRAELKQLAPRLV CCCCCCCCCCEEEEHHHHHHHHCCCCEEEECCCEEEEECCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377; 12086676 [H]