| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is gpmI [H]
Identifier: 160873173
GI number: 160873173
Start: 54182
End: 55726
Strand: Reverse
Name: gpmI [H]
Synonym: Sbal195_0047
Alternate gene names: 160873173
Gene position: 55726-54182 (Counterclockwise)
Preceding gene: 160873178
Following gene: 160873172
Centisome position: 1.04
GC content: 50.49
Gene sequence:
>1545_bases ATGACGACAGCTAAACGTCCGCTCGCGTTGTTGATCCTCGATGGCTGGGGCTACCGTGAAAACACGCATAACAATGCGAT TTTCCACGCCAACACTCCGGTACTCGACCGTCTCAACGCTCAATATCCCCATAGTTTGATTTCAGGTTCTGGCTTAGATG TAGGCTTACCTGATGGCCAGATGGGAAATTCTGAAGTTGGCCACATTAACTTAGGCTCTGGCCGTGTGGTTTATCAAGAA CTCACTCGCATCAGTAAAGCCATTGCAGATCATGAGTTTGAACAAAATCCAGCCCTGTGCGATGCGGTTGATTCAGCCAT TAAAGCCGGCGGCGCAGTGCACATTATGGGTCTGCTTTCTCCCGGTGGCGTTCACAGCCATGAAGAGCATATCGAAGCTA TGTGCCGGATGGCCGTTGCCCGTGGCGCAACTAAGGTTTATCTGCACGCTTTCCTCGATGGCCGCGATACACCACCGCGT AGCGCTAAGAGCAGCTTGAGCCATTTTGATGATCTGTTTACTACATTAGGCCATGGCCGTATCGCCTCGATTATTGGTCG TTACTTTGCAATGGACAGGGATAATCGTTGGGATCGTGTGTCACAAGCCTACGATTTGATCACCCAAGGCAAATCCAAAT TCCAATACGACAATGCGGTTACTGCATTAGAAGCGGCTTACGAGCGTAACGAGAACGACGAGTTCGTCTCTTCATCGGCA ATTACCGATGCCGACGGCCAAGTCGCCACCTTGCAAGATGGCGATGCACTGATATTTATGAACTTCCGTGCCGACCGTGC ACGTCAAATCACCCGTAGCTTTATCAACCCAGACTTCGATGGTTTCGAACGTGCTGTGGTGCCGAAAATGCACTTTGTCA CTCTGACTGAGTACGCCGGCGACATCAAAGCACCTATTGCGTATCCATCTGAAAACTTGGTAAATACCTTAGGTGAAGTG CTGCAAAAACAAGGTCGTACTCAACTGCGTATCTCTGAAACTGAGAAATATGCCCATGTGACTTTCTTCTTCAACGGCGG CAAAGAAGAGCCATTCGAAGGTGAAGATCGCATCCTAATCAACTCACCTAAAGTGGCGACTTACGATCTACAGCCTGAGA TGAGTTCAGCCGAGCTGACCGACAAGTTAGTGGCGGCAATTGAGTCGACCAAGTACGACGTGATCATCTGTAACTATCCG AATGGCGACATGGTTGGCCACACGGGTAATTTCGATGCCGCCGTTAAAGCCTGTGAAGCAGTTGACGCTTGTATCGGCTG TGTAGTGGATGCGCTGGCGAAAGTGGGTGGTGAATGCATTATTACCGCCGACCACGGCAACGCCGAGCAAATGACCGACG AAACCACAGGTCAGGCGCACACAGCGCACACCAGTGAACTGGTACCTTTCGTCTTTGTGGGCCGCGATGCGACCATAGAT GAAGGTGGTAAACTCAGCGATGTCGCACCGACTATCTTGACCTTGATTGGCGAAGCCATTCCAGCAGAGATGACGGGCAA GCCCTTAATCCACATTAAAGAGTAA
Upstream 100 bases:
>100_bases ACCTTAATCGGGGTAAAGCGCTTTTTCATACCCAGCTAACGTAGTAATATTTGACCAATTTCAGATTTCTATCGCTTCTA TAAAACTTAAAGGTATCACT
Downstream 100 bases:
>100_bases CCGTTACCTAGTGAGCACTCGACTCCTTGTTGTTAAAGCCAGCATTATTGCTGGCTTTATGATGTTATGTTTCTCGGCAA ACGCTTCTGATTTGGAGAAG
Product: phosphoglyceromutase
Products: NA
Alternate protein names: BPG-independent PGAM; Phosphoglyceromutase; iPGM [H]
Number of amino acids: Translated: 514; Mature: 513
Protein sequence:
>514_residues MTTAKRPLALLILDGWGYRENTHNNAIFHANTPVLDRLNAQYPHSLISGSGLDVGLPDGQMGNSEVGHINLGSGRVVYQE LTRISKAIADHEFEQNPALCDAVDSAIKAGGAVHIMGLLSPGGVHSHEEHIEAMCRMAVARGATKVYLHAFLDGRDTPPR SAKSSLSHFDDLFTTLGHGRIASIIGRYFAMDRDNRWDRVSQAYDLITQGKSKFQYDNAVTALEAAYERNENDEFVSSSA ITDADGQVATLQDGDALIFMNFRADRARQITRSFINPDFDGFERAVVPKMHFVTLTEYAGDIKAPIAYPSENLVNTLGEV LQKQGRTQLRISETEKYAHVTFFFNGGKEEPFEGEDRILINSPKVATYDLQPEMSSAELTDKLVAAIESTKYDVIICNYP NGDMVGHTGNFDAAVKACEAVDACIGCVVDALAKVGGECIITADHGNAEQMTDETTGQAHTAHTSELVPFVFVGRDATID EGGKLSDVAPTILTLIGEAIPAEMTGKPLIHIKE
Sequences:
>Translated_514_residues MTTAKRPLALLILDGWGYRENTHNNAIFHANTPVLDRLNAQYPHSLISGSGLDVGLPDGQMGNSEVGHINLGSGRVVYQE LTRISKAIADHEFEQNPALCDAVDSAIKAGGAVHIMGLLSPGGVHSHEEHIEAMCRMAVARGATKVYLHAFLDGRDTPPR SAKSSLSHFDDLFTTLGHGRIASIIGRYFAMDRDNRWDRVSQAYDLITQGKSKFQYDNAVTALEAAYERNENDEFVSSSA ITDADGQVATLQDGDALIFMNFRADRARQITRSFINPDFDGFERAVVPKMHFVTLTEYAGDIKAPIAYPSENLVNTLGEV LQKQGRTQLRISETEKYAHVTFFFNGGKEEPFEGEDRILINSPKVATYDLQPEMSSAELTDKLVAAIESTKYDVIICNYP NGDMVGHTGNFDAAVKACEAVDACIGCVVDALAKVGGECIITADHGNAEQMTDETTGQAHTAHTSELVPFVFVGRDATID EGGKLSDVAPTILTLIGEAIPAEMTGKPLIHIKE >Mature_513_residues TTAKRPLALLILDGWGYRENTHNNAIFHANTPVLDRLNAQYPHSLISGSGLDVGLPDGQMGNSEVGHINLGSGRVVYQEL TRISKAIADHEFEQNPALCDAVDSAIKAGGAVHIMGLLSPGGVHSHEEHIEAMCRMAVARGATKVYLHAFLDGRDTPPRS AKSSLSHFDDLFTTLGHGRIASIIGRYFAMDRDNRWDRVSQAYDLITQGKSKFQYDNAVTALEAAYERNENDEFVSSSAI TDADGQVATLQDGDALIFMNFRADRARQITRSFINPDFDGFERAVVPKMHFVTLTEYAGDIKAPIAYPSENLVNTLGEVL QKQGRTQLRISETEKYAHVTFFFNGGKEEPFEGEDRILINSPKVATYDLQPEMSSAELTDKLVAAIESTKYDVIICNYPN GDMVGHTGNFDAAVKACEAVDACIGCVVDALAKVGGECIITADHGNAEQMTDETTGQAHTAHTSELVPFVFVGRDATIDE GGKLSDVAPTILTLIGEAIPAEMTGKPLIHIKE
Specific function: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate [H]
COG id: COG0696
COG function: function code G; Phosphoglyceromutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the BPG-independent phosphoglycerate mutase family [H]
Homologues:
Organism=Escherichia coli, GI1790041, Length=515, Percent_Identity=67.1844660194175, Blast_Score=716, Evalue=0.0, Organism=Caenorhabditis elegans, GI17507741, Length=521, Percent_Identity=42.4184261036468, Blast_Score=409, Evalue=1e-114, Organism=Caenorhabditis elegans, GI32564249, Length=521, Percent_Identity=42.4184261036468, Blast_Score=409, Evalue=1e-114,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR011258 - InterPro: IPR006124 - InterPro: IPR005995 [H]
Pfam domain/function: PF06415 iPGM_N; PF01676 Metalloenzyme [H]
EC number: =5.4.2.1 [H]
Molecular weight: Translated: 55903; Mature: 55772
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTAKRPLALLILDGWGYRENTHNNAIFHANTPVLDRLNAQYPHSLISGSGLDVGLPDGQ CCCCCCCEEEEEECCCCCCCCCCCCEEEECCCCHHHHCCCCCCHHHHCCCCCEECCCCCC MGNSEVGHINLGSGRVVYQELTRISKAIADHEFEQNPALCDAVDSAIKAGGAVHIMGLLS CCCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCEEEEEEECC PGGVHSHEEHIEAMCRMAVARGATKVYLHAFLDGRDTPPRSAKSSLSHFDDLFTTLGHGR CCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCH IASIIGRYFAMDRDNRWDRVSQAYDLITQGKSKFQYDNAVTALEAAYERNENDEFVSSSA HHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHEHHHHHHHHHHHHHCCCCCHHHHCCC ITDADGQVATLQDGDALIFMNFRADRARQITRSFINPDFDGFERAVVPKMHFVTLTEYAG CCCCCCCEEEEECCCEEEEEECCCHHHHHHHHHHCCCCCCCHHHHHCCCEEEEEEEHHCC DIKAPIAYPSENLVNTLGEVLQKQGRTQLRISETEKYAHVTFFFNGGKEEPFEGEDRILI CCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEEEEECCCCCCCCCCCEEEE NSPKVATYDLQPEMSSAELTDKLVAAIESTKYDVIICNYPNGDMVGHTGNFDAAVKACEA ECCCEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHH VDACIGCVVDALAKVGGECIITADHGNAEQMTDETTGQAHTAHTSELVPFVFVGRDATID HHHHHHHHHHHHHHCCCCEEEEECCCCHHHHCCCCCCCCCCCCHHCCCEEEEECCCCCCC EGGKLSDVAPTILTLIGEAIPAEMTGKPLIHIKE CCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEECC >Mature Secondary Structure TTAKRPLALLILDGWGYRENTHNNAIFHANTPVLDRLNAQYPHSLISGSGLDVGLPDGQ CCCCCCEEEEEECCCCCCCCCCCCEEEECCCCHHHHCCCCCCHHHHCCCCCEECCCCCC MGNSEVGHINLGSGRVVYQELTRISKAIADHEFEQNPALCDAVDSAIKAGGAVHIMGLLS CCCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCEEEEEEECC PGGVHSHEEHIEAMCRMAVARGATKVYLHAFLDGRDTPPRSAKSSLSHFDDLFTTLGHGR CCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCH IASIIGRYFAMDRDNRWDRVSQAYDLITQGKSKFQYDNAVTALEAAYERNENDEFVSSSA HHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHEHHHHHHHHHHHHHCCCCCHHHHCCC ITDADGQVATLQDGDALIFMNFRADRARQITRSFINPDFDGFERAVVPKMHFVTLTEYAG CCCCCCCEEEEECCCEEEEEECCCHHHHHHHHHHCCCCCCCHHHHHCCCEEEEEEEHHCC DIKAPIAYPSENLVNTLGEVLQKQGRTQLRISETEKYAHVTFFFNGGKEEPFEGEDRILI CCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEEEEECCCCCCCCCCCEEEE NSPKVATYDLQPEMSSAELTDKLVAAIESTKYDVIICNYPNGDMVGHTGNFDAAVKACEA ECCCEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHH VDACIGCVVDALAKVGGECIITADHGNAEQMTDETTGQAHTAHTSELVPFVFVGRDATID HHHHHHHHHHHHHHCCCCEEEEECCCCHHHHCCCCCCCCCCCCHHCCCEEEEECCCCCCC EGGKLSDVAPTILTLIGEAIPAEMTGKPLIHIKE CCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA