Definition Prochlorococcus marinus str. MIT 9211, complete genome.
Accession NC_009976
Length 1,688,963

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The map label for this gene is rpoC2

Identifier: 159904146

GI number:

Start: 1430366

End: 1434466

Strand: Reverse

Name: rpoC2

Synonym: P9211_16051

Alternate gene names: NA

Gene position: NA

Preceding gene: 159904147

Following gene: 159904145

Centisome position: NA

GC content: NA

Gene sequence:

>4101_bases
ATGACTTCAACTTCTCCAAAATCTCGTAGATCTTCAGGCAAGGGCAGGAAGGGTAGCAAGAAGAAAGGTAAGCAGGTAAG
TCAAATACCACCTCTTTCCAAAACACCTCCCTCTTTTAGAAACCGTATAGTCGATAAGAAAGCTTTAAAACAGTTAGTAG
CTTGGGCCTATAAAAATCATGGAACAGCAGTTACTGCTGCCATGGCAGATAATCTTAAAGATCTTGGCTTTAAGTACGCA
ACTCAAGCAGCGGTCTCTATCTCTGTTGATGACTTAAAGGTTCCAGATGCAAAACAGGATTTACTTGGAGAAGCGGAGCA
GCAAATCACTGCTACAGAAGAGTGTTACCGCCTTGGAGAAATTACTGAAGTTGAACGTCATACGAAAGTGATTGATACCT
GGACTGAAACGAATGAGAGATTGGTTGATGCAGTCAAAAAGAATTTCAATCAAAACGACCCTCTGAATTCTGTATGGATG
ATGGCCAACTCTGGCGCAAGAGGAAACATGTCTCAAGTACGTCAACTGGTAGGCATGAGAGGTTTAATGGCTAACCCCCA
AGGTGAAATTATTGACTTGCCTATTCGCACTAATTTTAGAGAGGGTTTAACAGTAACTGAATATGTTATTTCTTCTTATG
GTGCACGTAAAGGTCTTGTTGACACTGCCTTAAGAACGGCTGACTCTGGATATTTGACAAGACGTCTAGTCGATGTGGCG
CAAGATGTAATAGTGCGAGAGGAAGATTGTGGAACCAGTAGAGCGATATTAGTAAAAGCTGAGGATGGACGTTTTGGGAA
TAGGCTTGTGGGACGTTTAACAGCAGAGCAAATCGTTGGTGACGCTGACGAAATAATAGCTAAGAAGGATACGGCAATCG
ACCCTGAATTGTCTAAGAAGATTGAAAAAGCAGGTTTAGCAGGAATTATGGTGCGATCTCCTTTGACTTGTGAGGCGACT
CGGTCTGTTTGTAGAAAGTGTTATGGATGGGCTTTGGCTCATAATAATTTGGTTGATCTTGGAGAAGCAGTAGGGATTAT
TGCAGCACAGTCAATTGGAGAGCCTGGGACTCAATTAACAATGAGAACTTTCCATACAGGAGGGGTATCCACTGCGGAAA
CAGGTGTAGTGAGGTCAACTATTGCAGGGAAGGTTGAGTTTGGACCTAATGCGCGTGTGCGTGGCTATAGAACTCCTCAT
GGAGTTGAAGCTCAGCAAGCCGAAGTTGACTTTACCTTGAAAGTTAAACCCACAGGAAGTGGTAAGACTCAAACTATTGA
AATTTCAAATGGTTCATTGATCTTTGTAGATAATGCACAAGAGATAGCCGCTGATGTCACAGTTGCTCAGATAACAGCAG
GAGCTGTGAAGAAGAGTGTTGAGAAAGCGACTAAAGATGTTATTTGTGACTTAGCTGGACAGGTTAGATATGAAAGTGTG
ATCCAGCCTAGAGAAGTAACTGATAGACAGGGCAATATCACTTTGAAGGCACAACGACTCGGACGACTTTGGGTCTTGGC
GGGAGATGTATACAATTTACCTCCTAATGCACGTCCAGTTGTTAAGGCTAACTCTAAAGTCTCCAAAGGAATGGTCTTGG
CAGAAGCGAGTCAAGCTAGTGAGTTTGGAGGAGAAGTTCGTTTGCGAGATTCTATTGGAGATTCTCGAGAAGTACAGATA
GTCACGACATCTATGACTTTGAAGGATTTTAAACTACTAGAAGAGTCGACTCATACAGGTGAGATATGGAATTTAGAGGC
TAAAGATGGTACAAGATATCGTCTCAACTCTATCCCAGGTAGCAAGATTAGTAGCGGGGAGATCGTAGCTGAACTAGCAG
ATGACCGATTCCGGACAAAGACAGGTGGACTAGTTAAATATGCACCGGGACTAGCTATCAAAAAGGCAAGGTCAGCGAAA
AACGGTTTTGAAGTTAGCAATGGTGGAACTTTGATCTGGGTTCCTCAAGAAACACATGAAATTAACAAGGATATTTCTTT
GCTAATGATTAAAGATCGCCAGTGGATAGAAGCTGGAACTGAAGTTGTTAAGGATATTTTCAGCCAAACTGCTGGAATAG
TGACTGTCACTCAAAAGAATGACATTTTGAGAGAGATTATTGTTCGTAGCGGCGAGTTTCACCTTTGTAATGAGTCAAAA
GTTCTAGAACGTTTTGAGGATGAAGGGCAGATGGTTAACCCTGGTGAGAATATCGCTAAAGGACTTAAGGCTGATTCAAT
GGTCCTTGTTCAAACAGTGGAATCTAGAGATGGAAAAGGTCTTTTACTAAGACCAGTTGAAGAGTACACAATTCCAGATC
AAGCCCAATTACCTGAACTTTCACATGTTAAGCAAGAGAAAGGTCCTTCTCTAGGACTGAGGGCGACCCAGAGACTTGCC
TTTAAAGATGGTGAGCTTATTAAGTCTGTGGAGGGTGTGGAGTTATTGAAAACCCAATTAATCCTGGACACTTTTGAAAC
GACCCCTCAAATGACTGTAGATGTTGAGGTGGCTTTAGATAAGCGAGCTAAAACAATTAACAGATTAAGACTAGTAATCC
TAGAAAGTATCTTGGTTAGACGAGACACCATGTCTGATTCAAGTCATGGATCTACTCATACAGAGCTACAAATTAAAGAT
AATCAACTAGTGAATGCTGATGATGTAGTCGCAACAACACAGATTTTATGTAAGGAAGATGGAATTGTTCAACTACCAAA
TGCCGTAGACGATGAACCTATACGTCGACTGATTGTTGAGCGTGCTCAAGATACTACTGTTTTGACTGCTAAAGACAACC
CTATCCTCAAGGTAGGTGAAAGGGTTGTCGACGGGGATTTATTGTCTAAAGGAGAGCCAATTAATTGTTGTGGAGAAGTT
GAAGATATTAAAGGAAATAAGGTAACACTTCGTCTTGGTAGACCTTATATGGTCTCTCCAGATTCTGTACTTCACGTACG
AGATGGGGATTTAGTTCAACGTGGAGATGGCTTGGCTTTATTGGTATTTGAAAGACAAAAAACTGGAGACATTGTTCAAG
GATTACCAAGAATTGAGGAATTATTAGAGGCACGAAGGCCAAGAGAATCAGCAATTCTTTGTAAAAAACCTGGTATAGTT
GAGATAAAACAAGAAGAGGATGATGAATCTGTAGTAGTTAAAGTTATAGAAAGCGACGACTCTTTATCCGAATATTCGAT
CCTTCTCGGTAGGAATGTCATGGTTAGTGATGGGCAAGAAGTACATGCAGGAGAATTCCTTACTGATGGCCCAGTTAATC
CTCATGAATTGCTTGAGTGTTTCTTTGGTGATCTTCGAGATAGAAAGCCTTTGTTGGAAGCTGCCCAAGAATCAATAGCA
AAATTGCAGCATCGACTAGTTACTGAGGTCCAGAATGTTTATAAGTCCCAGGGCGTCTCAATTGATGACAAGCATATTGA
GGTTATAGTTCGTCAGATGACCAGTAAGGTTCGTATAGAAGATGCTGGAGATACAACTTTACTTCCTGGAGAGTTAATTG
AGATTCGGCAAGTTGAAGATACCAATCAAGCAATCTCTGTGACTGGAGGTGCTCCGGCAGAGTTTACTCCGGTTCTTTTA
GGTATAACGAAAGCTTCTTTGAATACGGATAGCTTTATTTCTGCCGCTTCTTTCCAAGAAACCACTAGGGTTCTGACGGA
GGCAGCAATAGAAGGTAAATCGGATTGGCTAAGAGGGTTAAAAGAGAATGTGATTATTGGGCGACTTATTCCAGCTGGAA
CAGGCTTTAGTGGTTTTGTAGAAGAACTGAGAGCCGAGGCTGGGCCGCATCCAGATATTTTGGCTGAAGATCCAGCAGGT
TATAGACGTATGCAAAATCTAAGACCTGACTATACAGTTGAAATGCCTGTATCTACTGCTGCAAAATCAACCTCTGTATT
AGATGACCCGAGCGAGGAAGATTTAGAGGCCACTAGGAGTAGGCATGGAATAGATCCAACCACTAGTAATTTTGCAGCAT
TTGCTCGTCCTTCAGGAGATGATCCATCTCAAGAAGATCAAAAACCTGACCCAATTGCTTTAGAGGGGCTGCAAGAGGAG
GGATTGCTTGCAGATGAATAA

Upstream 100 bases:

>100_bases
GTTGGCCGTGTAGTAATGAATCACACCATTATTGATGCTGTTGCAATCGCTTAATTCTTTATCAACATTTTCTCAAATCA
CTCGACCTTAGGCATTCACA

Downstream 100 bases:

>100_bases
GGTAAAAACGTTAAAGCTATGCTCTATTGCTAACCTATAGTTGAAGGTAAAGAAGATGATTGAACCAAAGCTTATTCCTA
AAAGAATTTTGCCTCGTTAT

Product: DNA-directed RNA polymerase subunit beta'

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1366_residues
MTSTSPKSRRSSGKGRKGSKKKGKQVSQIPPLSKTPPSFRNRIVDKKALKQLVAWAYKNHGTAVTAAMADNLKDLGFKYA
TQAAVSISVDDLKVPDAKQDLLGEAEQQITATEECYRLGEITEVERHTKVIDTWTETNERLVDAVKKNFNQNDPLNSVWM
MANSGARGNMSQVRQLVGMRGLMANPQGEIIDLPIRTNFREGLTVTEYVISSYGARKGLVDTALRTADSGYLTRRLVDVA
QDVIVREEDCGTSRAILVKAEDGRFGNRLVGRLTAEQIVGDADEIIAKKDTAIDPELSKKIEKAGLAGIMVRSPLTCEAT
RSVCRKCYGWALAHNNLVDLGEAVGIIAAQSIGEPGTQLTMRTFHTGGVSTAETGVVRSTIAGKVEFGPNARVRGYRTPH
GVEAQQAEVDFTLKVKPTGSGKTQTIEISNGSLIFVDNAQEIAADVTVAQITAGAVKKSVEKATKDVICDLAGQVRYESV
IQPREVTDRQGNITLKAQRLGRLWVLAGDVYNLPPNARPVVKANSKVSKGMVLAEASQASEFGGEVRLRDSIGDSREVQI
VTTSMTLKDFKLLEESTHTGEIWNLEAKDGTRYRLNSIPGSKISSGEIVAELADDRFRTKTGGLVKYAPGLAIKKARSAK
NGFEVSNGGTLIWVPQETHEINKDISLLMIKDRQWIEAGTEVVKDIFSQTAGIVTVTQKNDILREIIVRSGEFHLCNESK
VLERFEDEGQMVNPGENIAKGLKADSMVLVQTVESRDGKGLLLRPVEEYTIPDQAQLPELSHVKQEKGPSLGLRATQRLA
FKDGELIKSVEGVELLKTQLILDTFETTPQMTVDVEVALDKRAKTINRLRLVILESILVRRDTMSDSSHGSTHTELQIKD
NQLVNADDVVATTQILCKEDGIVQLPNAVDDEPIRRLIVERAQDTTVLTAKDNPILKVGERVVDGDLLSKGEPINCCGEV
EDIKGNKVTLRLGRPYMVSPDSVLHVRDGDLVQRGDGLALLVFERQKTGDIVQGLPRIEELLEARRPRESAILCKKPGIV
EIKQEEDDESVVVKVIESDDSLSEYSILLGRNVMVSDGQEVHAGEFLTDGPVNPHELLECFFGDLRDRKPLLEAAQESIA
KLQHRLVTEVQNVYKSQGVSIDDKHIEVIVRQMTSKVRIEDAGDTTLLPGELIEIRQVEDTNQAISVTGGAPAEFTPVLL
GITKASLNTDSFISAASFQETTRVLTEAAIEGKSDWLRGLKENVIIGRLIPAGTGFSGFVEELRAEAGPHPDILAEDPAG
YRRMQNLRPDYTVEMPVSTAAKSTSVLDDPSEEDLEATRSRHGIDPTTSNFAAFARPSGDDPSQEDQKPDPIALEGLQEE
GLLADE

Sequences:
NA

Specific function: NA

COG id: COG0086

COG function: function code K; DNA-directed RNA polymerase, beta' subunit/160 kD subunit

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA