The gene/protein map for NC_009972 is currently unavailable.
Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

Click here to switch to the map view.

The map label for this gene is rpmC [H]

Identifier: 304360653

GI number: 304360653

Start: 6258629

End: 6258832

Strand: Direct

Name: rpmC [H]

Synonym: NA

Alternate gene names: 304360653

Gene position: 6258629-6258832 (Clockwise)

Preceding gene: 159901433

Following gene: 159901434

Centisome position: 98.61

GC content: 47.55

Gene sequence:

>204_bases
ATGAAGGCTAGTGAACTGCGCGACATGAGTAACGCTGATTTGGAAAAGTTGATCAACGATAACAAACAAGAGTTGTTCAC
CATGCGTTTCCAAAAATCAGTTGGCAAATTGACCAACACCGCCCGCGTGCGGTTGTTGAAAAAAGATATCGCCCGCGCCA
AAACGGTCATCCACGAACGCACCTTGGTGGCGGAGGGAAATTAA

Upstream 100 bases:
NA

Downstream 100 bases:
NA

Product: 50S ribosomal protein L29

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 67; Mature: 67

Protein sequence:
NA

Sequences:

>Translated_67_residues
MKASELRDMSNADLEKLINDNKQELFTMRFQKSVGKLTNTARVRLLKKDIARAKTVIHERTLVAEGN
>Mature_67_residues
MKASELRDMSNADLEKLINDNKQELFTMRFQKSVGKLTNTARVRLLKKDIARAKTVIHERTLVAEGN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L29P family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001854
- InterPro:   IPR018254 [H]

Pfam domain/function: PF00831 Ribosomal_L29 [H]

EC number: NA

Molecular weight: Translated: 7687; Mature: 7687

Theoretical pI: Translated: 10.78; Mature: 10.78

Prosite motif: PS00579 RIBOSOMAL_L29

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKASELRDMSNADLEKLINDNKQELFTMRFQKSVGKLTNTARVRLLKKDIARAKTVIHER
CCCHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLVAEGN
HHCCCCC
>Mature Secondary Structure
MKASELRDMSNADLEKLINDNKQELFTMRFQKSVGKLTNTARVRLLKKDIARAKTVIHER
CCCHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLVAEGN
HHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA