| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159901504
Identifier: 159901504
GI number: 159901504
Start: 6332237
End: 6332707
Strand: Direct
Name: 159901504
Synonym: Haur_4993
Alternate gene names: NA
Gene position: 6332237-6332707 (Clockwise)
Preceding gene: 159901503
Following gene: 159901507
Centisome position: 99.77
GC content: 49.68
Gene sequence:
>471_bases ATGAAACGATTATGGCTTGGATTGCTGTTGTTGGTTTTAGCAAGCTGTGGTGGAGCAACCCCAACCAGCGTACCAGCTAC CGCCACAACTGCGCCAACTGCAACCAGTGCAGCCAACCCTGAAGTGCTGCTGACCTTCGCCCAAACTGGTGGAATTGCTG GAATTAACGAGACCCTGACGATTTGGAGTGATGGCAAACTAGAATTAGCCAGTGTGAGCGCTGCAAGTACCTTGCGGGTT GGCGCTGCCACACCCGAACAATTGACCGCACTCCAAACAATTTTGAATGATCCAGCCTTTGCGAGCCTTGCCCCAAGCTA CGGCGATTTGGGTAGTTGCTGCGATATGTTTAGCTATACCCTGACTACGGGCAACAAATCGATCGCGACGATTGATGGTG CAGCGTATCCCGAAATTTTAGCGAAATTGTTTGAGCAATTGCAAACCCTCAAACAATCAATTCCTCAATAA
Upstream 100 bases:
>100_bases TTTCGCCCGATGCTACCGCCCGCTTTGAAGGCAGCGTATTGTTTAGCCCCAGCCAATATAAAATTGCCCGGTATGAGACG TTTGTTCGAGGAACGACTGA
Downstream 100 bases:
>100_bases TCAATAAGCTTAAAAACCGCCTTGATCATCAGCCGATTAAGGCGGTTTTTCGTGCTACCAATTGACCATAATCGAACCAG TGGCCTTGTTTAGCCGCAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 156; Mature: 156
Protein sequence:
>156_residues MKRLWLGLLLLVLASCGGATPTSVPATATTAPTATSAANPEVLLTFAQTGGIAGINETLTIWSDGKLELASVSAASTLRV GAATPEQLTALQTILNDPAFASLAPSYGDLGSCCDMFSYTLTTGNKSIATIDGAAYPEILAKLFEQLQTLKQSIPQ
Sequences:
>Translated_156_residues MKRLWLGLLLLVLASCGGATPTSVPATATTAPTATSAANPEVLLTFAQTGGIAGINETLTIWSDGKLELASVSAASTLRV GAATPEQLTALQTILNDPAFASLAPSYGDLGSCCDMFSYTLTTGNKSIATIDGAAYPEILAKLFEQLQTLKQSIPQ >Mature_156_residues MKRLWLGLLLLVLASCGGATPTSVPATATTAPTATSAANPEVLLTFAQTGGIAGINETLTIWSDGKLELASVSAASTLRV GAATPEQLTALQTILNDPAFASLAPSYGDLGSCCDMFSYTLTTGNKSIATIDGAAYPEILAKLFEQLQTLKQSIPQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16048; Mature: 16048
Theoretical pI: Translated: 4.29; Mature: 4.29
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLWLGLLLLVLASCGGATPTSVPATATTAPTATSAANPEVLLTFAQTGGIAGINETLT CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEE IWSDGKLELASVSAASTLRVGAATPEQLTALQTILNDPAFASLAPSYGDLGSCCDMFSYT EECCCCEEEEECCCHHHEEECCCCHHHHHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHHH LTTGNKSIATIDGAAYPEILAKLFEQLQTLKQSIPQ EECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKRLWLGLLLLVLASCGGATPTSVPATATTAPTATSAANPEVLLTFAQTGGIAGINETLT CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEE IWSDGKLELASVSAASTLRVGAATPEQLTALQTILNDPAFASLAPSYGDLGSCCDMFSYT EECCCCEEEEECCCHHHEEECCCCHHHHHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHHH LTTGNKSIATIDGAAYPEILAKLFEQLQTLKQSIPQ EECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA