| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is cshA [H]
Identifier: 159901480
GI number: 159901480
Start: 6304890
End: 6306644
Strand: Direct
Name: cshA [H]
Synonym: Haur_4969
Alternate gene names: 159901480
Gene position: 6304890-6306644 (Clockwise)
Preceding gene: 159901479
Following gene: 159901481
Centisome position: 99.34
GC content: 52.88
Gene sequence:
>1755_bases ATGACTACGTTTACGGAACTTGGGCTAGGCGAAGCGACGTTGCGGGCAATTACTGAACTTGGCTATGAAGAACCAACTCC AATCCAAGCCCAAAGTATTGGTTTGATGCTTAGTGGCAATGATATTATTGCCCAAGCTCAAACAGGTACCGGCAAAACCG CTGCTTTTTCGTTGCCAACGATCGAACGGATTGATCCCAAAGCCATGGGTGTGCAAGCCTTGATCTTGACCCCAACGCGC GAATTAGCCGTCCAAGTCTCGGATGCTATTTCAGCGTATGGCAAATATTTGAATATTCGCGCCTTGCCAGTCTATGGTGG TCAACCAATTGATCGCCAACTTCGCGCTTTGAAGCGTGGGGTCAATATTGTCATCGGCACACCTGGCCGTTTGATGGACC ACATGGAACGTGGCACGCTTGATCTTTCGACCGTGCGCACTGTGGTGCTCGACGAAGCCGACGAAATGCTCAACATGGGC TTTGTTGATGATATTGAATATATTTTGGAACGCGCTCCCAAAGATCGCCAAACCGCTTTATATTCAGCCACCATGCCCGA TGAAATTGCGCGTTTGGCTCGCAAATACTTGCGCTCACCCCAAATGGTGACGATCGAACGCGAACAATTGACTGTACCGC AAATTCGCCAAGTCTATTATGAAATTGGCGCACGCGATAAATTTGAAGTGCTCACGCGGATTCTTGACCTTGAAATGCCA ACCTCGGCGATTATTTTCTGCCGAACCAAGGCCATGGTCGATGAGCTTGGTGAAAAATTGTTGGCTCGTGGTTATGGCGC TGAATTGCTGCACGGCGATTTAAGCCAAGCTATGCGCGACCGCGTGATGAAGCGCTTCCGCGAAGAACAAGTGGAAATTT TGGTCGCAACCGACGTTGCTGCCCGTGGTTTGGATATTGAACATGTCAGCCACGTGATCAACTATGATATTCCGCTTGAT CCAGAAGCCTATGTTCACCGGATTGGCCGAACTGGCCGAGCTGGCCGTTCAGGTGTTGCTGTAACCTTGGTAACGCCACG CGAACGCCGCCAACTGCGCACGATCGAACGTATGACTGGTGCTCCAATTCAACGCTTACGCTTGCCAACGATTGCCGATG TGGTTGCCCGCCGCCGCGAAGCATTCAAAGATAACTTGCGTGAATTGATCGAGCAACACAACGAACAGGGTGGTTTGGAG CAATATTTGGTCTTGGCTGAAGAATTGGCCGAACAATATTCACCAACCGATTTGGCCGCTGCTGCCTTCAAGATGATGCT TGGTGAGCCAGATTTGACCGCCGAAGATCCTTTAGAAATGGTTGAAGACGAAGCCACCTTCGATGCTCGCCGTGGTGATC GCCGCGATAGCCGCGATAATGGTCGCCGTGGCGATCGCCGCGACAATGGTCGCGCTGGTGAGCGACCTGGTGAGCGCGGT GGCGATCGGGCTGCCCGTGGGCCTCGTAGCGGTGGCGATCGCAACAACGGTGGCCGCTCGTTCCGCGAAGAAGGCATGAC CCGCTTGTTTGTAGACATTGGCCGCGAACAGGGTGTGCGCCCAGCTGATATTGTTGGCGCAATTGCCAACGAATCAGGCT TGCCAGGCCGTGCAATCGGCGCAATCGACATTTTCGATAACTTCACCTTTGTTGATGTGCCAGATGAGGCTGCGAACCGC GTGTTGGCTGCCCTTGGTCGGACCCAAATTCGCGGTGTGAAAATCACCCCAACCTTGGCCCGCCCACGTCGCTAA
Upstream 100 bases:
>100_bases CTTGCTTGCCATTCGGGGGGTTAGGGCGACTCCGCACGCTGCGGGACGGTAACAGCAACGGGCTGTTAACCCTACATTCA CCGAAAGGATACTCGTTTTA
Downstream 100 bases:
>100_bases ACTCATTTATTCGTCCAGTGCTTCGGCTCCTTGGTTGCTGCCAAGGAGCCGTTTTTGATTAACGTATAATTGCGCCAATC ATCTTAGTGAGGTTGGCGAT
Product: DEAD/DEAH box helicase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 584; Mature: 583
Protein sequence:
>584_residues MTTFTELGLGEATLRAITELGYEEPTPIQAQSIGLMLSGNDIIAQAQTGTGKTAAFSLPTIERIDPKAMGVQALILTPTR ELAVQVSDAISAYGKYLNIRALPVYGGQPIDRQLRALKRGVNIVIGTPGRLMDHMERGTLDLSTVRTVVLDEADEMLNMG FVDDIEYILERAPKDRQTALYSATMPDEIARLARKYLRSPQMVTIEREQLTVPQIRQVYYEIGARDKFEVLTRILDLEMP TSAIIFCRTKAMVDELGEKLLARGYGAELLHGDLSQAMRDRVMKRFREEQVEILVATDVAARGLDIEHVSHVINYDIPLD PEAYVHRIGRTGRAGRSGVAVTLVTPRERRQLRTIERMTGAPIQRLRLPTIADVVARRREAFKDNLRELIEQHNEQGGLE QYLVLAEELAEQYSPTDLAAAAFKMMLGEPDLTAEDPLEMVEDEATFDARRGDRRDSRDNGRRGDRRDNGRAGERPGERG GDRAARGPRSGGDRNNGGRSFREEGMTRLFVDIGREQGVRPADIVGAIANESGLPGRAIGAIDIFDNFTFVDVPDEAANR VLAALGRTQIRGVKITPTLARPRR
Sequences:
>Translated_584_residues MTTFTELGLGEATLRAITELGYEEPTPIQAQSIGLMLSGNDIIAQAQTGTGKTAAFSLPTIERIDPKAMGVQALILTPTR ELAVQVSDAISAYGKYLNIRALPVYGGQPIDRQLRALKRGVNIVIGTPGRLMDHMERGTLDLSTVRTVVLDEADEMLNMG FVDDIEYILERAPKDRQTALYSATMPDEIARLARKYLRSPQMVTIEREQLTVPQIRQVYYEIGARDKFEVLTRILDLEMP TSAIIFCRTKAMVDELGEKLLARGYGAELLHGDLSQAMRDRVMKRFREEQVEILVATDVAARGLDIEHVSHVINYDIPLD PEAYVHRIGRTGRAGRSGVAVTLVTPRERRQLRTIERMTGAPIQRLRLPTIADVVARRREAFKDNLRELIEQHNEQGGLE QYLVLAEELAEQYSPTDLAAAAFKMMLGEPDLTAEDPLEMVEDEATFDARRGDRRDSRDNGRRGDRRDNGRAGERPGERG GDRAARGPRSGGDRNNGGRSFREEGMTRLFVDIGREQGVRPADIVGAIANESGLPGRAIGAIDIFDNFTFVDVPDEAANR VLAALGRTQIRGVKITPTLARPRR >Mature_583_residues TTFTELGLGEATLRAITELGYEEPTPIQAQSIGLMLSGNDIIAQAQTGTGKTAAFSLPTIERIDPKAMGVQALILTPTRE LAVQVSDAISAYGKYLNIRALPVYGGQPIDRQLRALKRGVNIVIGTPGRLMDHMERGTLDLSTVRTVVLDEADEMLNMGF VDDIEYILERAPKDRQTALYSATMPDEIARLARKYLRSPQMVTIEREQLTVPQIRQVYYEIGARDKFEVLTRILDLEMPT SAIIFCRTKAMVDELGEKLLARGYGAELLHGDLSQAMRDRVMKRFREEQVEILVATDVAARGLDIEHVSHVINYDIPLDP EAYVHRIGRTGRAGRSGVAVTLVTPRERRQLRTIERMTGAPIQRLRLPTIADVVARRREAFKDNLRELIEQHNEQGGLEQ YLVLAEELAEQYSPTDLAAAAFKMMLGEPDLTAEDPLEMVEDEATFDARRGDRRDSRDNGRRGDRRDNGRAGERPGERGG DRAARGPRSGGDRNNGGRSFREEGMTRLFVDIGREQGVRPADIVGAIANESGLPGRAIGAIDIFDNFTFVDVPDEAANRV LAALGRTQIRGVKITPTLARPRR
Specific function: May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures. Unwinds dsRNA in both 5'- and 3'-directions and shows RNA-dependent ATPase activity [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm, nucleoid [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI7661920, Length=374, Percent_Identity=40.9090909090909, Blast_Score=296, Evalue=4e-80, Organism=Homo sapiens, GI20149629, Length=362, Percent_Identity=39.7790055248619, Blast_Score=267, Evalue=2e-71, Organism=Homo sapiens, GI4503529, Length=375, Percent_Identity=39.2, Blast_Score=266, Evalue=3e-71, Organism=Homo sapiens, GI45446747, Length=356, Percent_Identity=41.2921348314607, Blast_Score=266, Evalue=5e-71, Organism=Homo sapiens, GI45446743, Length=356, Percent_Identity=41.2921348314607, Blast_Score=266, Evalue=5e-71, Organism=Homo sapiens, GI224593278, Length=394, Percent_Identity=38.8324873096447, Blast_Score=265, Evalue=1e-70, Organism=Homo sapiens, GI13129006, Length=391, Percent_Identity=37.5959079283887, Blast_Score=265, Evalue=1e-70, Organism=Homo sapiens, GI148613856, Length=361, Percent_Identity=41.2742382271468, Blast_Score=263, Evalue=5e-70, Organism=Homo sapiens, GI38201710, Length=361, Percent_Identity=41.2742382271468, Blast_Score=263, Evalue=5e-70, Organism=Homo sapiens, GI164664518, Length=362, Percent_Identity=37.5690607734807, Blast_Score=261, Evalue=1e-69, Organism=Homo sapiens, GI83700235, Length=375, Percent_Identity=38.9333333333333, Blast_Score=261, Evalue=2e-69, Organism=Homo sapiens, GI41327771, Length=378, Percent_Identity=41.2698412698413, Blast_Score=257, Evalue=2e-68, Organism=Homo sapiens, GI50659095, Length=402, Percent_Identity=37.5621890547264, Blast_Score=257, Evalue=2e-68, Organism=Homo sapiens, GI4758138, Length=359, Percent_Identity=40.1114206128134, Blast_Score=257, Evalue=2e-68, Organism=Homo sapiens, GI222352149, Length=345, Percent_Identity=40.8695652173913, Blast_Score=253, Evalue=3e-67, Organism=Homo sapiens, GI301171467, Length=370, Percent_Identity=39.7297297297297, Blast_Score=249, Evalue=6e-66, Organism=Homo sapiens, GI301171475, Length=370, Percent_Identity=39.7297297297297, Blast_Score=248, Evalue=8e-66, Organism=Homo sapiens, GI87196351, Length=370, Percent_Identity=39.7297297297297, Blast_Score=248, Evalue=8e-66, Organism=Homo sapiens, GI169881239, Length=370, Percent_Identity=39.7297297297297, Blast_Score=245, Evalue=7e-65, Organism=Homo sapiens, GI13514809, Length=370, Percent_Identity=39.7297297297297, Blast_Score=245, Evalue=7e-65, Organism=Homo sapiens, GI21071032, Length=360, Percent_Identity=38.8888888888889, Blast_Score=239, Evalue=8e-63, Organism=Homo sapiens, GI55749865, Length=345, Percent_Identity=36.8115942028986, Blast_Score=238, Evalue=9e-63, Organism=Homo sapiens, GI41327773, Length=359, Percent_Identity=38.9972144846797, Blast_Score=237, Evalue=3e-62, Organism=Homo sapiens, GI188035877, Length=417, Percent_Identity=36.21103117506, Blast_Score=233, Evalue=5e-61, Organism=Homo sapiens, GI41327776, Length=362, Percent_Identity=35.9116022099448, Blast_Score=229, Evalue=6e-60, Organism=Homo sapiens, GI13518015, Length=356, Percent_Identity=36.5168539325843, Blast_Score=228, Evalue=1e-59, Organism=Homo sapiens, GI216548263, Length=356, Percent_Identity=36.5168539325843, Blast_Score=228, Evalue=1e-59, Organism=Homo sapiens, GI262231852, Length=356, Percent_Identity=36.5168539325843, Blast_Score=228, Evalue=1e-59, Organism=Homo sapiens, GI262118318, Length=356, Percent_Identity=36.5168539325843, Blast_Score=228, Evalue=2e-59, Organism=Homo sapiens, GI31542656, Length=364, Percent_Identity=37.3626373626374, Blast_Score=227, Evalue=2e-59, Organism=Homo sapiens, GI6005743, Length=385, Percent_Identity=35.5844155844156, Blast_Score=225, Evalue=1e-58, Organism=Homo sapiens, GI164419743, Length=349, Percent_Identity=35.5300859598854, Blast_Score=225, Evalue=1e-58, Organism=Homo sapiens, GI51094101, Length=349, Percent_Identity=35.5300859598854, Blast_Score=225, Evalue=1e-58, Organism=Homo sapiens, GI8922886, Length=383, Percent_Identity=35.7702349869452, Blast_Score=225, Evalue=1e-58, Organism=Homo sapiens, GI41327779, Length=412, Percent_Identity=34.7087378640777, Blast_Score=219, Evalue=7e-57, Organism=Homo sapiens, GI62241022, Length=366, Percent_Identity=36.0655737704918, Blast_Score=217, Evalue=2e-56, Organism=Homo sapiens, GI4758112, Length=346, Percent_Identity=32.9479768786127, Blast_Score=216, Evalue=6e-56, Organism=Homo sapiens, GI18375623, Length=346, Percent_Identity=32.9479768786127, Blast_Score=216, Evalue=6e-56, Organism=Homo sapiens, GI164419732, Length=376, Percent_Identity=35.3723404255319, Blast_Score=215, Evalue=1e-55, Organism=Homo sapiens, GI21040371, Length=346, Percent_Identity=33.5260115606936, Blast_Score=214, Evalue=1e-55, Organism=Homo sapiens, GI13514831, Length=359, Percent_Identity=35.3760445682451, Blast_Score=212, Evalue=6e-55, Organism=Homo sapiens, GI62241024, Length=343, Percent_Identity=36.4431486880466, Blast_Score=207, Evalue=2e-53, Organism=Homo sapiens, GI256223453, Length=352, Percent_Identity=33.8068181818182, Blast_Score=205, Evalue=1e-52, Organism=Homo sapiens, GI38327634, Length=413, Percent_Identity=32.6876513317191, Blast_Score=188, Evalue=1e-47, Organism=Homo sapiens, GI9506931, Length=395, Percent_Identity=30.8860759493671, Blast_Score=178, Evalue=1e-44, Organism=Homo sapiens, GI38569505, Length=371, Percent_Identity=29.3800539083558, Blast_Score=176, Evalue=6e-44, Organism=Homo sapiens, GI38569503, Length=371, Percent_Identity=29.3800539083558, Blast_Score=175, Evalue=1e-43, Organism=Homo sapiens, GI17505907, Length=405, Percent_Identity=30.1234567901235, Blast_Score=169, Evalue=6e-42, Organism=Homo sapiens, GI4826686, Length=357, Percent_Identity=32.7731092436975, Blast_Score=163, Evalue=4e-40, Organism=Homo sapiens, GI256773275, Length=410, Percent_Identity=29.0243902439024, Blast_Score=156, Evalue=4e-38, Organism=Homo sapiens, GI9966805, Length=318, Percent_Identity=31.4465408805031, Blast_Score=141, Evalue=1e-33, Organism=Homo sapiens, GI154759257, Length=417, Percent_Identity=26.6187050359712, Blast_Score=129, Evalue=8e-30, Organism=Homo sapiens, GI20336298, Length=214, Percent_Identity=35.981308411215, Blast_Score=122, Evalue=1e-27, Organism=Escherichia coli, GI87082221, Length=575, Percent_Identity=42.4347826086957, Blast_Score=417, Evalue=1e-118, Organism=Escherichia coli, GI1787016, Length=373, Percent_Identity=44.5040214477212, Blast_Score=316, Evalue=2e-87, Organism=Escherichia coli, GI1787605, Length=360, Percent_Identity=43.0555555555556, Blast_Score=302, Evalue=5e-83, Organism=Escherichia coli, GI1790214, Length=369, Percent_Identity=39.5663956639566, Blast_Score=258, Evalue=5e-70, Organism=Escherichia coli, GI1788930, Length=370, Percent_Identity=39.1891891891892, Blast_Score=222, Evalue=5e-59, Organism=Escherichia coli, GI48994977, Length=351, Percent_Identity=25.9259259259259, Blast_Score=85, Evalue=2e-17, Organism=Caenorhabditis elegans, GI71987143, Length=374, Percent_Identity=43.048128342246, Blast_Score=327, Evalue=1e-89, Organism=Caenorhabditis elegans, GI71995724, Length=374, Percent_Identity=41.4438502673797, Blast_Score=298, Evalue=6e-81, Organism=Caenorhabditis elegans, GI17507121, Length=374, Percent_Identity=41.1764705882353, Blast_Score=297, Evalue=9e-81, Organism=Caenorhabditis elegans, GI17552114, Length=354, Percent_Identity=37.8531073446328, Blast_Score=274, Evalue=8e-74, Organism=Caenorhabditis elegans, GI17555296, Length=367, Percent_Identity=38.6920980926431, Blast_Score=265, Evalue=7e-71, Organism=Caenorhabditis elegans, GI32565321, Length=380, Percent_Identity=39.4736842105263, Blast_Score=260, Evalue=2e-69, Organism=Caenorhabditis elegans, GI17510309, Length=367, Percent_Identity=40.8719346049046, Blast_Score=244, Evalue=1e-64, Organism=Caenorhabditis elegans, GI17510307, Length=367, Percent_Identity=40.8719346049046, Blast_Score=244, Evalue=1e-64, Organism=Caenorhabditis elegans, GI71995514, Length=367, Percent_Identity=40.8719346049046, Blast_Score=243, Evalue=2e-64, Organism=Caenorhabditis elegans, GI17537549, Length=363, Percent_Identity=38.2920110192837, Blast_Score=240, Evalue=1e-63, Organism=Caenorhabditis elegans, GI17510559, Length=438, Percent_Identity=34.4748858447489, Blast_Score=239, Evalue=2e-63, Organism=Caenorhabditis elegans, GI115533224, Length=334, Percent_Identity=39.5209580838323, Blast_Score=236, Evalue=2e-62, Organism=Caenorhabditis elegans, GI71999646, Length=365, Percent_Identity=34.2465753424658, Blast_Score=231, Evalue=8e-61, Organism=Caenorhabditis elegans, GI71999644, Length=364, Percent_Identity=34.3406593406593, Blast_Score=231, Evalue=1e-60, Organism=Caenorhabditis elegans, GI86570094, Length=362, Percent_Identity=37.292817679558, Blast_Score=230, Evalue=2e-60, Organism=Caenorhabditis elegans, GI71995718, Length=378, Percent_Identity=38.0952380952381, Blast_Score=229, Evalue=4e-60, Organism=Caenorhabditis elegans, GI17507945, Length=362, Percent_Identity=38.9502762430939, Blast_Score=228, Evalue=9e-60, Organism=Caenorhabditis elegans, GI17536099, Length=371, Percent_Identity=36.3881401617251, Blast_Score=226, Evalue=2e-59, Organism=Caenorhabditis elegans, GI17536101, Length=371, Percent_Identity=36.3881401617251, Blast_Score=226, Evalue=3e-59, Organism=Caenorhabditis elegans, GI17536103, Length=371, Percent_Identity=36.3881401617251, Blast_Score=226, Evalue=3e-59, Organism=Caenorhabditis elegans, GI17552642, Length=356, Percent_Identity=38.2022471910112, Blast_Score=222, Evalue=3e-58, Organism=Caenorhabditis elegans, GI17507879, Length=372, Percent_Identity=37.3655913978495, Blast_Score=221, Evalue=7e-58, Organism=Caenorhabditis elegans, GI115532548, Length=399, Percent_Identity=33.0827067669173, Blast_Score=219, Evalue=2e-57, Organism=Caenorhabditis elegans, GI115532546, Length=380, Percent_Identity=33.9473684210526, Blast_Score=219, Evalue=4e-57, Organism=Caenorhabditis elegans, GI17507877, Length=370, Percent_Identity=36.2162162162162, Blast_Score=216, Evalue=2e-56, Organism=Caenorhabditis elegans, GI71982858, Length=348, Percent_Identity=33.0459770114943, Blast_Score=208, Evalue=8e-54, Organism=Caenorhabditis elegans, GI17509811, Length=377, Percent_Identity=32.8912466843501, Blast_Score=206, Evalue=3e-53, Organism=Caenorhabditis elegans, GI17507881, Length=370, Percent_Identity=35.9459459459459, Blast_Score=205, Evalue=6e-53, Organism=Caenorhabditis elegans, GI193206561, Length=344, Percent_Identity=34.0116279069767, Blast_Score=203, Evalue=2e-52, Organism=Caenorhabditis elegans, GI17553716, Length=359, Percent_Identity=30.6406685236769, Blast_Score=196, Evalue=2e-50, Organism=Caenorhabditis elegans, GI193208216, Length=416, Percent_Identity=31.9711538461538, Blast_Score=189, Evalue=4e-48, Organism=Caenorhabditis elegans, GI17505370, Length=366, Percent_Identity=33.3333333333333, Blast_Score=176, Evalue=2e-44, Organism=Caenorhabditis elegans, GI17556951, Length=386, Percent_Identity=31.0880829015544, Blast_Score=174, Evalue=1e-43, Organism=Caenorhabditis elegans, GI17508543, Length=372, Percent_Identity=29.5698924731183, Blast_Score=170, Evalue=2e-42, Organism=Caenorhabditis elegans, GI25148203, Length=452, Percent_Identity=25.6637168141593, Blast_Score=159, Evalue=3e-39, Organism=Caenorhabditis elegans, GI17507641, Length=389, Percent_Identity=30.5912596401028, Blast_Score=148, Evalue=9e-36, Organism=Caenorhabditis elegans, GI71990816, Length=357, Percent_Identity=29.9719887955182, Blast_Score=148, Evalue=1e-35, Organism=Caenorhabditis elegans, GI25148291, Length=367, Percent_Identity=29.1553133514986, Blast_Score=146, Evalue=4e-35, Organism=Caenorhabditis elegans, GI32564046, Length=376, Percent_Identity=30.3191489361702, Blast_Score=139, Evalue=5e-33, Organism=Caenorhabditis elegans, GI71982862, Length=204, Percent_Identity=31.3725490196078, Blast_Score=125, Evalue=5e-29, Organism=Caenorhabditis elegans, GI71997889, Length=365, Percent_Identity=24.6575342465753, Blast_Score=119, Evalue=3e-27, Organism=Caenorhabditis elegans, GI25148205, Length=381, Percent_Identity=23.8845144356955, Blast_Score=112, Evalue=4e-25, Organism=Caenorhabditis elegans, GI71987152, Length=111, Percent_Identity=45.945945945946, Blast_Score=110, Evalue=3e-24, Organism=Caenorhabditis elegans, GI17566630, Length=327, Percent_Identity=26.2996941896024, Blast_Score=87, Evalue=2e-17, Organism=Caenorhabditis elegans, GI25145561, Length=406, Percent_Identity=23.1527093596059, Blast_Score=72, Evalue=8e-13, Organism=Caenorhabditis elegans, GI32564293, Length=111, Percent_Identity=29.7297297297297, Blast_Score=66, Evalue=6e-11, Organism=Saccharomyces cerevisiae, GI6320224, Length=366, Percent_Identity=39.8907103825137, Blast_Score=297, Evalue=4e-81, Organism=Saccharomyces cerevisiae, GI6324217, Length=358, Percent_Identity=41.6201117318436, Blast_Score=274, Evalue=2e-74, Organism=Saccharomyces cerevisiae, GI6320041, Length=361, Percent_Identity=38.781163434903, Blast_Score=267, Evalue=4e-72, Organism=Saccharomyces cerevisiae, GI6325138, Length=396, Percent_Identity=37.3737373737374, Blast_Score=259, Evalue=1e-69, Organism=Saccharomyces cerevisiae, GI6322912, Length=364, Percent_Identity=39.2857142857143, Blast_Score=258, Evalue=2e-69, Organism=Saccharomyces cerevisiae, GI6322323, Length=364, Percent_Identity=39.2857142857143, Blast_Score=258, Evalue=2e-69, Organism=Saccharomyces cerevisiae, GI6324778, Length=364, Percent_Identity=39.5604395604396, Blast_Score=257, Evalue=3e-69, Organism=Saccharomyces cerevisiae, GI6321856, Length=365, Percent_Identity=39.7260273972603, Blast_Score=252, Evalue=1e-67, Organism=Saccharomyces cerevisiae, GI6324620, Length=380, Percent_Identity=37.8947368421053, Blast_Score=245, Evalue=2e-65, Organism=Saccharomyces cerevisiae, GI6321360, Length=360, Percent_Identity=40, Blast_Score=244, Evalue=3e-65, Organism=Saccharomyces cerevisiae, GI6323021, Length=420, Percent_Identity=35, Blast_Score=224, Evalue=2e-59, Organism=Saccharomyces cerevisiae, GI6320119, Length=357, Percent_Identity=33.3333333333333, Blast_Score=219, Evalue=8e-58, Organism=Saccharomyces cerevisiae, GI6322427, Length=361, Percent_Identity=34.6260387811634, Blast_Score=217, Evalue=4e-57, Organism=Saccharomyces cerevisiae, GI6320173, Length=436, Percent_Identity=30.2752293577982, Blast_Score=212, Evalue=1e-55, Organism=Saccharomyces cerevisiae, GI6320449, Length=362, Percent_Identity=36.4640883977901, Blast_Score=207, Evalue=5e-54, Organism=Saccharomyces cerevisiae, GI6321963, Length=370, Percent_Identity=35.4054054054054, Blast_Score=203, Evalue=7e-53, Organism=Saccharomyces cerevisiae, GI6323947, Length=435, Percent_Identity=32.183908045977, Blast_Score=198, Evalue=2e-51, Organism=Saccharomyces cerevisiae, GI6319714, Length=377, Percent_Identity=33.42175066313, Blast_Score=197, Evalue=5e-51, Organism=Saccharomyces cerevisiae, GI6321111, Length=351, Percent_Identity=30.7692307692308, Blast_Score=178, Evalue=3e-45, Organism=Saccharomyces cerevisiae, GI6323306, Length=420, Percent_Identity=29.2857142857143, Blast_Score=171, Evalue=2e-43, Organism=Saccharomyces cerevisiae, GI6319618, Length=429, Percent_Identity=31.002331002331, Blast_Score=169, Evalue=1e-42, Organism=Saccharomyces cerevisiae, GI6321267, Length=388, Percent_Identity=31.701030927835, Blast_Score=168, Evalue=2e-42, Organism=Saccharomyces cerevisiae, GI6320400, Length=385, Percent_Identity=31.6883116883117, Blast_Score=165, Evalue=2e-41, Organism=Saccharomyces cerevisiae, GI6324366, Length=403, Percent_Identity=23.5732009925558, Blast_Score=114, Evalue=3e-26, Organism=Saccharomyces cerevisiae, GI6322876, Length=231, Percent_Identity=30.3030303030303, Blast_Score=97, Evalue=9e-21, Organism=Saccharomyces cerevisiae, GI6321374, Length=425, Percent_Identity=23.5294117647059, Blast_Score=90, Evalue=9e-19, Organism=Drosophila melanogaster, GI24645031, Length=374, Percent_Identity=41.4438502673797, Blast_Score=296, Evalue=3e-80, Organism=Drosophila melanogaster, GI24583279, Length=403, Percent_Identity=36.2282878411911, Blast_Score=273, Evalue=2e-73, Organism=Drosophila melanogaster, GI24583281, Length=403, Percent_Identity=36.2282878411911, Blast_Score=273, Evalue=3e-73, Organism=Drosophila melanogaster, GI24582080, Length=374, Percent_Identity=39.572192513369, Blast_Score=271, Evalue=1e-72, Organism=Drosophila melanogaster, GI24582078, Length=374, Percent_Identity=39.572192513369, Blast_Score=271, Evalue=1e-72, Organism=Drosophila melanogaster, GI17136248, Length=374, Percent_Identity=39.572192513369, Blast_Score=271, Evalue=1e-72, Organism=Drosophila melanogaster, GI24582075, Length=374, Percent_Identity=39.572192513369, Blast_Score=271, Evalue=1e-72, Organism=Drosophila melanogaster, GI28574962, Length=353, Percent_Identity=41.9263456090652, Blast_Score=265, Evalue=5e-71, Organism=Drosophila melanogaster, GI24585582, Length=362, Percent_Identity=39.7790055248619, Blast_Score=265, Evalue=6e-71, Organism=Drosophila melanogaster, GI24662330, Length=356, Percent_Identity=39.8876404494382, Blast_Score=257, Evalue=1e-68, Organism=Drosophila melanogaster, GI21355075, Length=382, Percent_Identity=38.7434554973822, Blast_Score=256, Evalue=3e-68, Organism=Drosophila melanogaster, GI24584994, Length=377, Percent_Identity=40.5835543766578, Blast_Score=255, Evalue=8e-68, Organism=Drosophila melanogaster, GI24644483, Length=363, Percent_Identity=39.3939393939394, Blast_Score=253, Evalue=3e-67, Organism=Drosophila melanogaster, GI281361218, Length=363, Percent_Identity=39.3939393939394, Blast_Score=253, Evalue=3e-67, Organism=Drosophila melanogaster, GI24644481, Length=363, Percent_Identity=39.3939393939394, Blast_Score=253, Evalue=3e-67, Organism=Drosophila melanogaster, GI24644487, Length=363, Percent_Identity=39.3939393939394, Blast_Score=253, Evalue=3e-67, Organism=Drosophila melanogaster, GI45551833, Length=363, Percent_Identity=39.3939393939394, Blast_Score=253, Evalue=3e-67, Organism=Drosophila melanogaster, GI24644485, Length=363, Percent_Identity=39.3939393939394, Blast_Score=253, Evalue=3e-67, Organism=Drosophila melanogaster, GI24644479, Length=363, Percent_Identity=39.3939393939394, Blast_Score=253, Evalue=4e-67, Organism=Drosophila melanogaster, GI24584399, Length=358, Percent_Identity=39.1061452513966, Blast_Score=249, Evalue=5e-66, Organism=Drosophila melanogaster, GI24642151, Length=359, Percent_Identity=38.7186629526462, Blast_Score=248, Evalue=8e-66, Organism=Drosophila melanogaster, GI21356161, Length=377, Percent_Identity=37.9310344827586, Blast_Score=248, Evalue=8e-66, Organism=Drosophila melanogaster, GI18857967, Length=371, Percent_Identity=39.3530997304582, Blast_Score=246, Evalue=4e-65, Organism=Drosophila melanogaster, GI17985987, Length=375, Percent_Identity=37.8666666666667, Blast_Score=237, Evalue=2e-62, Organism=Drosophila melanogaster, GI17977678, Length=357, Percent_Identity=39.2156862745098, Blast_Score=236, Evalue=3e-62, Organism=Drosophila melanogaster, GI28575014, Length=365, Percent_Identity=33.4246575342466, Blast_Score=232, Evalue=4e-61, Organism=Drosophila melanogaster, GI281365720, Length=310, Percent_Identity=40.9677419354839, Blast_Score=215, Evalue=7e-56, Organism=Drosophila melanogaster, GI17136814, Length=395, Percent_Identity=35.1898734177215, Blast_Score=208, Evalue=1e-53, Organism=Drosophila melanogaster, GI24581954, Length=347, Percent_Identity=33.1412103746398, Blast_Score=201, Evalue=8e-52, Organism=Drosophila melanogaster, GI24581952, Length=347, Percent_Identity=33.1412103746398, Blast_Score=201, Evalue=8e-52, Organism=Drosophila melanogaster, GI24581956, Length=347, Percent_Identity=33.1412103746398, Blast_Score=201, Evalue=8e-52, Organism=Drosophila melanogaster, GI28571808, Length=406, Percent_Identity=33.2512315270936, Blast_Score=196, Evalue=3e-50, Organism=Drosophila melanogaster, GI28571809, Length=406, Percent_Identity=33.2512315270936, Blast_Score=196, Evalue=3e-50, Organism=Drosophila melanogaster, GI24642822, Length=373, Percent_Identity=33.5120643431635, Blast_Score=193, Evalue=3e-49, Organism=Drosophila melanogaster, GI17647335, Length=378, Percent_Identity=31.2169312169312, Blast_Score=192, Evalue=5e-49, Organism=Drosophila melanogaster, GI21355559, Length=367, Percent_Identity=33.7874659400545, Blast_Score=189, Evalue=6e-48, Organism=Drosophila melanogaster, GI20130173, Length=464, Percent_Identity=29.9568965517241, Blast_Score=179, Evalue=4e-45, Organism=Drosophila melanogaster, GI24643725, Length=392, Percent_Identity=29.5918367346939, Blast_Score=174, Evalue=2e-43, Organism=Drosophila melanogaster, GI24666101, Length=346, Percent_Identity=32.9479768786127, Blast_Score=171, Evalue=1e-42, Organism=Drosophila melanogaster, GI18859659, Length=446, Percent_Identity=30.4932735426009, Blast_Score=167, Evalue=2e-41, Organism=Drosophila melanogaster, GI28571338, Length=446, Percent_Identity=30.4932735426009, Blast_Score=167, Evalue=2e-41, Organism=Drosophila melanogaster, GI24668515, Length=331, Percent_Identity=33.2326283987915, Blast_Score=156, Evalue=4e-38, Organism=Drosophila melanogaster, GI19920478, Length=362, Percent_Identity=27.9005524861878, Blast_Score=139, Evalue=4e-33, Organism=Drosophila melanogaster, GI24640164, Length=346, Percent_Identity=26.5895953757225, Blast_Score=115, Evalue=1e-25, Organism=Drosophila melanogaster, GI17136666, Length=99, Percent_Identity=35.3535353535354, Blast_Score=70, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 64892; Mature: 64761
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTFTELGLGEATLRAITELGYEEPTPIQAQSIGLMLSGNDIIAQAQTGTGKTAAFSLPT CCCCHHCCCCHHHHHHHHHCCCCCCCCCCHHHEEEEEECCCEEEEECCCCCCEEEEECCC IERIDPKAMGVQALILTPTRELAVQVSDAISAYGKYLNIRALPVYGGQPIDRQLRALKRG HHHCCCHHHCEEEEEECCCHHHHHHHHHHHHHHCCEEEEEEEECCCCCCHHHHHHHHHCC VNIVIGTPGRLMDHMERGTLDLSTVRTVVLDEADEMLNMGFVDDIEYILERAPKDRQTAL CEEEEECCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHE YSATMPDEIARLARKYLRSPQMVTIEREQLTVPQIRQVYYEIGARDKFEVLTRILDLEMP EECCCHHHHHHHHHHHHCCCCEEEEEHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCC TSAIIFCRTKAMVDELGEKLLARGYGAELLHGDLSQAMRDRVMKRFREEQVEILVATDVA CCEEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECHH ARGLDIEHVSHVINYDIPLDPEAYVHRIGRTGRAGRSGVAVTLVTPRERRQLRTIERMTG HCCCCHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHHHHHHHCC APIQRLRLPTIADVVARRREAFKDNLRELIEQHNEQGGLEQYLVLAEELAEQYSPTDLAA CCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHH AAFKMMLGEPDLTAEDPLEMVEDEATFDARRGDRRDSRDNGRRGDRRDNGRAGERPGERG HHHHHHHCCCCCCCCCCHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GDRAARGPRSGGDRNNGGRSFREEGMTRLFVDIGREQGVRPADIVGAIANESGLPGRAIG CCCCCCCCCCCCCCCCCCCHHHHHCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEEE AIDIFDNFTFVDVPDEAANRVLAALGRTQIRGVKITPTLARPRR EEEECCCCEEEECCHHHHHHHHHHHCHHHCCCEEECCCCCCCCC >Mature Secondary Structure TTFTELGLGEATLRAITELGYEEPTPIQAQSIGLMLSGNDIIAQAQTGTGKTAAFSLPT CCCHHCCCCHHHHHHHHHCCCCCCCCCCHHHEEEEEECCCEEEEECCCCCCEEEEECCC IERIDPKAMGVQALILTPTRELAVQVSDAISAYGKYLNIRALPVYGGQPIDRQLRALKRG HHHCCCHHHCEEEEEECCCHHHHHHHHHHHHHHCCEEEEEEEECCCCCCHHHHHHHHHCC VNIVIGTPGRLMDHMERGTLDLSTVRTVVLDEADEMLNMGFVDDIEYILERAPKDRQTAL CEEEEECCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHE YSATMPDEIARLARKYLRSPQMVTIEREQLTVPQIRQVYYEIGARDKFEVLTRILDLEMP EECCCHHHHHHHHHHHHCCCCEEEEEHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCC TSAIIFCRTKAMVDELGEKLLARGYGAELLHGDLSQAMRDRVMKRFREEQVEILVATDVA CCEEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECHH ARGLDIEHVSHVINYDIPLDPEAYVHRIGRTGRAGRSGVAVTLVTPRERRQLRTIERMTG HCCCCHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHHHHHHHCC APIQRLRLPTIADVVARRREAFKDNLRELIEQHNEQGGLEQYLVLAEELAEQYSPTDLAA CCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHH AAFKMMLGEPDLTAEDPLEMVEDEATFDARRGDRRDSRDNGRRGDRRDNGRAGERPGERG HHHHHHHCCCCCCCCCCHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GDRAARGPRSGGDRNNGGRSFREEGMTRLFVDIGREQGVRPADIVGAIANESGLPGRAIG CCCCCCCCCCCCCCCCCCCHHHHHCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEEE AIDIFDNFTFVDVPDEAANRVLAALGRTQIRGVKITPTLARPRR EEEECCCCEEEECCHHHHHHHHHHHCHHHCCCEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA