| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159901479
Identifier: 159901479
GI number: 159901479
Start: 6303252
End: 6304646
Strand: Direct
Name: 159901479
Synonym: Haur_4968
Alternate gene names: NA
Gene position: 6303252-6304646 (Clockwise)
Preceding gene: 159901477
Following gene: 159901480
Centisome position: 99.32
GC content: 51.25
Gene sequence:
>1395_bases GTGGCACGGATTTGGCGTTGGCTTGGGGCTAGCTTAATCATCATTATTGGGTTGATATGGCTTATTCGGCAGCCACCAAG TTTGGCGCGGCAAGCGGCTCAAGCTCGTTTAGCTGGCAACTGGCATCAAGCAACTCGCTTATATCAACAATTAAACCAAA CCCAGCCAAGTGTGCCCAATCAATTAGCCTTGACTGAGTTGTATTTGACTCGCGGCGAGTGGCAAGCAGCTGATTATCAA TTAATCGAGGTGTTTCGCCAACCTCTGAATGTTGAACAACACCAACAAGCTTGGCAATTCTATGGCTGGGCTGGCTTGCA ACGTGGCGATCAAGCTGCGGTTCAAGCAACAATTCGTACTTTAGAATCTGATCCATGGAGCCACTTGCTACAAGCCGAAT TGGCGTTCCGCGTGGGCGATTTGATTAGTGCGACCAATCAATTAAATCAAGTTCAAGCCTTGCCCCAGCCTTGGCAGAAT TGGGCTTGGCTGCGGAGCGCTGAGCTGGCATTGCCCACTGATCCGAGCCTTGCACAACAGGTTTTAGCCCAAATTCAACC GCAAACCAGCGGCCCGCGCTTGGCCAATCCATGGCAGTTGCAACAACGAATTCGGCGGATGCAGCAACTTGTGCCACAAG ATCCAACTCAACGTATGCTTGGCGTGGCCAGTTTATGGAGTGAACAGGGTTTGTGGCAAGCCGCCGATCTACTGCTTAGC CAAATTCCTGCCAGCGATCAAATGGCGAGTTTTGCCGCTAACCAACGCGCCTTGTTGTATTGGAGTGCTGGTGATAATGT CACGGCGTTGGCGTTGATCGCCACGGCTCAAGAGCAATGGCCAAATGTTGCGACCCTGCCACGCACCCAAGCCAAAATTG CCGCTAGCAGTCAACAGCTCGATTTGGCCCTGGCTGCATTGCAACAAGCAGTTAATTTGGAGCCAGCCAGTAGCGAAAAT TATTTAGTTGCGGCAACGATTAGCCTAAGCCAAGGCGATTTTAATGGCACTACCGCCGCCTACAATCAAGCGATTGCGAC TGGGCCGTTGAGTGGCAGTTTGGCTTTAGAGGCTGCCAATTTTTATATCAATACGCCGTTGCGCCGCTGTAGCAGTGGCT TGGAGTATGCTCGTCAAGCGCTGAATACACCAGTTGACGCGTTGGCACGGCGGGTTGTAGCCAATACTGCGTTGCAATGC TCGTTGGCGGCTGAAGCTGAACACATGATCTCGCCGCTCTATCAAACCAGCCCTGATGATCCGCAATTGGCCTATTTATA TGCTGTTGCTCGTTGGCAACAAGCCAAGCCCGATGGCCAAATGTTGCTCAAACAAGCTGCCAATCAGGCAATTCAAACCC CATGGCTTCAGCAAATTGAACAGTATTTGAACTGA
Upstream 100 bases:
>100_bases TCTCCTTGGTGTCCTTCGTGTCCTTCGTGTCCTTCGTGGATCGAAACCCAACCCAGCAAAATCGTGGATAATAGGCCTAA ATCTGGTTGGGGAGGCACAT
Downstream 100 bases:
>100_bases GCCAGCGCAATCAAAAATTAAGAAGATGCACCTATCTGCGTTTTGGCATAATCAAAAAATCATGCTATAATCGGATCTAA CGCTAAGCAGAGAACGAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 464; Mature: 463
Protein sequence:
>464_residues MARIWRWLGASLIIIIGLIWLIRQPPSLARQAAQARLAGNWHQATRLYQQLNQTQPSVPNQLALTELYLTRGEWQAADYQ LIEVFRQPLNVEQHQQAWQFYGWAGLQRGDQAAVQATIRTLESDPWSHLLQAELAFRVGDLISATNQLNQVQALPQPWQN WAWLRSAELALPTDPSLAQQVLAQIQPQTSGPRLANPWQLQQRIRRMQQLVPQDPTQRMLGVASLWSEQGLWQAADLLLS QIPASDQMASFAANQRALLYWSAGDNVTALALIATAQEQWPNVATLPRTQAKIAASSQQLDLALAALQQAVNLEPASSEN YLVAATISLSQGDFNGTTAAYNQAIATGPLSGSLALEAANFYINTPLRRCSSGLEYARQALNTPVDALARRVVANTALQC SLAAEAEHMISPLYQTSPDDPQLAYLYAVARWQQAKPDGQMLLKQAANQAIQTPWLQQIEQYLN
Sequences:
>Translated_464_residues MARIWRWLGASLIIIIGLIWLIRQPPSLARQAAQARLAGNWHQATRLYQQLNQTQPSVPNQLALTELYLTRGEWQAADYQ LIEVFRQPLNVEQHQQAWQFYGWAGLQRGDQAAVQATIRTLESDPWSHLLQAELAFRVGDLISATNQLNQVQALPQPWQN WAWLRSAELALPTDPSLAQQVLAQIQPQTSGPRLANPWQLQQRIRRMQQLVPQDPTQRMLGVASLWSEQGLWQAADLLLS QIPASDQMASFAANQRALLYWSAGDNVTALALIATAQEQWPNVATLPRTQAKIAASSQQLDLALAALQQAVNLEPASSEN YLVAATISLSQGDFNGTTAAYNQAIATGPLSGSLALEAANFYINTPLRRCSSGLEYARQALNTPVDALARRVVANTALQC SLAAEAEHMISPLYQTSPDDPQLAYLYAVARWQQAKPDGQMLLKQAANQAIQTPWLQQIEQYLN >Mature_463_residues ARIWRWLGASLIIIIGLIWLIRQPPSLARQAAQARLAGNWHQATRLYQQLNQTQPSVPNQLALTELYLTRGEWQAADYQL IEVFRQPLNVEQHQQAWQFYGWAGLQRGDQAAVQATIRTLESDPWSHLLQAELAFRVGDLISATNQLNQVQALPQPWQNW AWLRSAELALPTDPSLAQQVLAQIQPQTSGPRLANPWQLQQRIRRMQQLVPQDPTQRMLGVASLWSEQGLWQAADLLLSQ IPASDQMASFAANQRALLYWSAGDNVTALALIATAQEQWPNVATLPRTQAKIAASSQQLDLALAALQQAVNLEPASSENY LVAATISLSQGDFNGTTAAYNQAIATGPLSGSLALEAANFYINTPLRRCSSGLEYARQALNTPVDALARRVVANTALQCS LAAEAEHMISPLYQTSPDDPQLAYLYAVARWQQAKPDGQMLLKQAANQAIQTPWLQQIEQYLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51500; Mature: 51369
Theoretical pI: Translated: 6.14; Mature: 6.14
Prosite motif: PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARIWRWLGASLIIIIGLIWLIRQPPSLARQAAQARLAGNWHQATRLYQQLNQTQPSVPN CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCC QLALTELYLTRGEWQAADYQLIEVFRQPLNVEQHQQAWQFYGWAGLQRGDQAAVQATIRT HHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH LESDPWSHLLQAELAFRVGDLISATNQLNQVQALPQPWQNWAWLRSAELALPTDPSLAQQ HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCHHHHHH VLAQIQPQTSGPRLANPWQLQQRIRRMQQLVPQDPTQRMLGVASLWSEQGLWQAADLLLS HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHH QIPASDQMASFAANQRALLYWSAGDNVTALALIATAQEQWPNVATLPRTQAKIAASSQQL HCCCHHHHHHHHCCCCEEEEEECCCCEEEHHHHHHHHHHCCCCCCCCCHHHHHHHCHHHH DLALAALQQAVNLEPASSENYLVAATISLSQGDFNGTTAAYNQAIATGPLSGSLALEAAN HHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHCCCCCCCEEEEEHH FYINTPLRRCSSGLEYARQALNTPVDALARRVVANTALQCSLAAEAEHMISPLYQTSPDD HEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PQLAYLYAVARWQQAKPDGQMLLKQAANQAIQTPWLQQIEQYLN CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCC >Mature Secondary Structure ARIWRWLGASLIIIIGLIWLIRQPPSLARQAAQARLAGNWHQATRLYQQLNQTQPSVPN CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCC QLALTELYLTRGEWQAADYQLIEVFRQPLNVEQHQQAWQFYGWAGLQRGDQAAVQATIRT HHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH LESDPWSHLLQAELAFRVGDLISATNQLNQVQALPQPWQNWAWLRSAELALPTDPSLAQQ HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCHHHHHH VLAQIQPQTSGPRLANPWQLQQRIRRMQQLVPQDPTQRMLGVASLWSEQGLWQAADLLLS HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHH QIPASDQMASFAANQRALLYWSAGDNVTALALIATAQEQWPNVATLPRTQAKIAASSQQL HCCCHHHHHHHHCCCCEEEEEECCCCEEEHHHHHHHHHHCCCCCCCCCHHHHHHHCHHHH DLALAALQQAVNLEPASSENYLVAATISLSQGDFNGTTAAYNQAIATGPLSGSLALEAAN HHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHCCCCCCCEEEEEHH FYINTPLRRCSSGLEYARQALNTPVDALARRVVANTALQCSLAAEAEHMISPLYQTSPDD HEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PQLAYLYAVARWQQAKPDGQMLLKQAANQAIQTPWLQQIEQYLN CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA