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The map label for this gene is 159901465

Identifier: 159901465

GI number: 159901465

Start: 6290556

End: 6291071

Strand: Reverse

Name: 159901465

Synonym: Haur_4954

Alternate gene names: NA

Gene position: 6291071-6290556 (Counterclockwise)

Preceding gene: 159901466

Following gene: 159901464

Centisome position: 99.13

GC content: 45.93

Gene sequence:

>516_bases
ATGGCAGACCCATTTGTTGCTGAGATTCGGATTGTTGGCTTCAACTTTGCTCCCCGTGGCTGGGCTTTTTGTGATGGTCA
ATTATTGCCAATTTCGCAAAATACTGCATTATTTTCATTGTTAGGCACAACCTATGGTGGTAATGGCAAAAGCAACTTTG
CCCTGCCCGATTTCCAAGGGCGTTCCCCAATGCATCAAGGACAAGGGCCAGGCTTGAGTTTACGCGATCTGGGAGAAACT
GGTGGTTCTGAAACTGTCACCTTATTACAAAGCGAAATCCCCAGCCACAACCATATCTTTAATTATGTTGGGATCGATGG
CAATAATGCTGATCCAACGAATAATCTCTTTGGTGGCAGCGAATCAACCGATGCCTTTCGCAATGCTCCCGATACAACGC
TATCGCCGCAAGAACTTTCATTAACTGGTGGAGATCAACCGCATAATAATATGCAGCCCTATCTAACCCTGAATTTTATT
ATTGCCCTACAAGGGGTCTTCCCACCCCGCACCTAA

Upstream 100 bases:

>100_bases
TGATTTCATTATTTCTTTGTACGGCATCTTCCCATCCCCAACTTAGGCGAAAAAAGCCGACCTTGAATCGTTAAGTATAT
GTAGTTGTTGAGGTGCTTGT

Downstream 100 bases:

>100_bases
GTTCGAACGATCGGCATTAAGCTATTTAAGAGGATGACATTAATATGGCAGAACCATTTTTAGCCGAAATTCGCCTGTTT
TCGTTCGTATTTGCCCCCAA

Product: tail collar domain-containing protein

Products: NA

Alternate protein names: Phage Tail Collar; Phage Tail Collar Domain-Containing Protein; Tail Collar Domain-Containing Protein; Microcystin Dependent Protein; Microcystin-Dependent Protein; Phage Tail Collar Domain Protein; Phage Tail Collar Domain Family; Microcystin Dependent Protein MdpB; Microcystin-Dependent Protein-Like Protein; Microcystin Dependent; Phenylacrylic Acid Decarboxylase; Cell Wall/Surface Repeat Protein

Number of amino acids: Translated: 171; Mature: 170

Protein sequence:

>171_residues
MADPFVAEIRIVGFNFAPRGWAFCDGQLLPISQNTALFSLLGTTYGGNGKSNFALPDFQGRSPMHQGQGPGLSLRDLGET
GGSETVTLLQSEIPSHNHIFNYVGIDGNNADPTNNLFGGSESTDAFRNAPDTTLSPQELSLTGGDQPHNNMQPYLTLNFI
IALQGVFPPRT

Sequences:

>Translated_171_residues
MADPFVAEIRIVGFNFAPRGWAFCDGQLLPISQNTALFSLLGTTYGGNGKSNFALPDFQGRSPMHQGQGPGLSLRDLGET
GGSETVTLLQSEIPSHNHIFNYVGIDGNNADPTNNLFGGSESTDAFRNAPDTTLSPQELSLTGGDQPHNNMQPYLTLNFI
IALQGVFPPRT
>Mature_170_residues
ADPFVAEIRIVGFNFAPRGWAFCDGQLLPISQNTALFSLLGTTYGGNGKSNFALPDFQGRSPMHQGQGPGLSLRDLGETG
GSETVTLLQSEIPSHNHIFNYVGIDGNNADPTNNLFGGSESTDAFRNAPDTTLSPQELSLTGGDQPHNNMQPYLTLNFII
ALQGVFPPRT

Specific function: Unknown

COG id: COG4675

COG function: function code S; Microcystin-dependent protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18326; Mature: 18194

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADPFVAEIRIVGFNFAPRGWAFCDGQLLPISQNTALFSLLGTTYGGNGKSNFALPDFQG
CCCCCEEEEEEEEECCCCCCCEEECCEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCC
RSPMHQGQGPGLSLRDLGETGGSETVTLLQSEIPSHNHIFNYVGIDGNNADPTNNLFGGS
CCCCCCCCCCCCCHHHHCCCCCCCEEEEEHHHCCCCCCEEEEEEECCCCCCCCCCCCCCC
ESTDAFRNAPDTTLSPQELSLTGGDQPHNNMQPYLTLNFIIALQGVFPPRT
CCCHHHHCCCCCCCCCCEEEECCCCCCCCCCCCEEEEEEEEEEECCCCCCC
>Mature Secondary Structure 
ADPFVAEIRIVGFNFAPRGWAFCDGQLLPISQNTALFSLLGTTYGGNGKSNFALPDFQG
CCCCEEEEEEEEECCCCCCCEEECCEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCC
RSPMHQGQGPGLSLRDLGETGGSETVTLLQSEIPSHNHIFNYVGIDGNNADPTNNLFGGS
CCCCCCCCCCCCCHHHHCCCCCCCEEEEEHHHCCCCCCEEEEEEECCCCCCCCCCCCCCC
ESTDAFRNAPDTTLSPQELSLTGGDQPHNNMQPYLTLNFIIALQGVFPPRT
CCCHHHHCCCCCCCCCCEEEECCCCCCCCCCCCEEEEEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA