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The map label for this gene is 159901393

Identifier: 159901393

GI number: 159901393

Start: 6218228

End: 6218962

Strand: Direct

Name: 159901393

Synonym: Haur_4882

Alternate gene names: NA

Gene position: 6218228-6218962 (Clockwise)

Preceding gene: 159901389

Following gene: 159901394

Centisome position: 97.98

GC content: 53.06

Gene sequence:

>735_bases
ATGACAAGCCGTTTGATTCCGCCAATTCGCAGCCAACAATTACTTGATAAAAGCCATTGTGCCTTGTGTGGGCAACGCTT
GTTGGGCGCATATTATTTTTTACCCGACCGCCCAGAGCGCTATTGCGAAACCTGTATCGAGCAACGCCCACGCTGTTCTA
GCTGTGCCGCGCCAGTTGGCGACGATGGCTGGACGCTGCACGATGGGCGGGTGCAATGTGGCGGTTGCCATCGCAGCGCA
ATTTATGATCCCCAGGAAGCCCAAGCCTTATATGCATCGACCGTCGCTTCGCTTGCCCAACACCCTGGCTTGCAAGTCCA
AGTTGGGGCCAGCTTTCGGCTCGTCGATCAGCCTACGATTCAAGATTTAGCTCGCCAAGGCGCGATTGCCACCGAAGGCC
AACAGATGCTTGGACTCTATTTGCGCCAAGGCCGAATGCGGGTAGTTTATGCGTTGTATGGCTTGCCACGTTGGCGTTTT
CGCTTGGTAGTGGCCCACGAATTTGCCCATGTTTGGCAGGGCGAACATTGTCCATTATTAACTGATTACGATTGGGTCGA
GGGCTTTGCCGAGTGGGTTGCCTACCAACATTTGCTATTTTTGGGCGCAACCAAGGCCGCTGAAAGATTACGCAACGCTG
AACACCCTTATCGCAAAGGTTTGGAGCAATGCCTCAAGCTTGAAGAACAAATTGGCATTCGCGGTGTTTTGGCAGCAATG
CGCACCTTAGAATAG

Upstream 100 bases:

>100_bases
CAAGCTTTGTGCGTCTAAGTTACAGGCTCAACAACGTGGGATAATTGTAGCAGATACCAAGCCGATCTATCGGGGCAATC
TAGATGAGAGTTGAAAATCG

Downstream 100 bases:

>100_bases
TTGGGGGAACGATGCGCTTACTGGTTGCAGCTTTTTTGGCCTTTATGCTTTCAACAACGGGCTTTTTTACCTTTTTGCCA
AGCGCCGCCAAATTAACCAC

Product: LIM, zinc-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 244; Mature: 243

Protein sequence:

>244_residues
MTSRLIPPIRSQQLLDKSHCALCGQRLLGAYYFLPDRPERYCETCIEQRPRCSSCAAPVGDDGWTLHDGRVQCGGCHRSA
IYDPQEAQALYASTVASLAQHPGLQVQVGASFRLVDQPTIQDLARQGAIATEGQQMLGLYLRQGRMRVVYALYGLPRWRF
RLVVAHEFAHVWQGEHCPLLTDYDWVEGFAEWVAYQHLLFLGATKAAERLRNAEHPYRKGLEQCLKLEEQIGIRGVLAAM
RTLE

Sequences:

>Translated_244_residues
MTSRLIPPIRSQQLLDKSHCALCGQRLLGAYYFLPDRPERYCETCIEQRPRCSSCAAPVGDDGWTLHDGRVQCGGCHRSA
IYDPQEAQALYASTVASLAQHPGLQVQVGASFRLVDQPTIQDLARQGAIATEGQQMLGLYLRQGRMRVVYALYGLPRWRF
RLVVAHEFAHVWQGEHCPLLTDYDWVEGFAEWVAYQHLLFLGATKAAERLRNAEHPYRKGLEQCLKLEEQIGIRGVLAAM
RTLE
>Mature_243_residues
TSRLIPPIRSQQLLDKSHCALCGQRLLGAYYFLPDRPERYCETCIEQRPRCSSCAAPVGDDGWTLHDGRVQCGGCHRSAI
YDPQEAQALYASTVASLAQHPGLQVQVGASFRLVDQPTIQDLARQGAIATEGQQMLGLYLRQGRMRVVYALYGLPRWRFR
LVVAHEFAHVWQGEHCPLLTDYDWVEGFAEWVAYQHLLFLGATKAAERLRNAEHPYRKGLEQCLKLEEQIGIRGVLAAMR
TLE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27596; Mature: 27465

Theoretical pI: Translated: 7.70; Mature: 7.70

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
4.1 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSRLIPPIRSQQLLDKSHCALCGQRLLGAYYFLPDRPERYCETCIEQRPRCSSCAAPVG
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCC
DDGWTLHDGRVQCGGCHRSAIYDPQEAQALYASTVASLAQHPGLQVQVGASFRLVDQPTI
CCCCEEECCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCEEEECCCCHH
QDLARQGAIATEGQQMLGLYLRQGRMRVVYALYGLPRWRFRLVVAHEFAHVWQGEHCPLL
HHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCC
TDYDWVEGFAEWVAYQHLLFLGATKAAERLRNAEHPYRKGLEQCLKLEEQIGIRGVLAAM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCHHHHHHHH
RTLE
HHCC
>Mature Secondary Structure 
TSRLIPPIRSQQLLDKSHCALCGQRLLGAYYFLPDRPERYCETCIEQRPRCSSCAAPVG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCC
DDGWTLHDGRVQCGGCHRSAIYDPQEAQALYASTVASLAQHPGLQVQVGASFRLVDQPTI
CCCCEEECCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCEEEECCCCHH
QDLARQGAIATEGQQMLGLYLRQGRMRVVYALYGLPRWRFRLVVAHEFAHVWQGEHCPLL
HHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCC
TDYDWVEGFAEWVAYQHLLFLGATKAAERLRNAEHPYRKGLEQCLKLEEQIGIRGVLAAM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCHHHHHHHH
RTLE
HHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA