The gene/protein map for NC_009972 is currently unavailable.
Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159901390

Identifier: 159901390

GI number: 159901390

Start: 6214452

End: 6216152

Strand: Reverse

Name: 159901390

Synonym: Haur_4879

Alternate gene names: NA

Gene position: 6216152-6214452 (Counterclockwise)

Preceding gene: 159901391

Following gene: 159901387

Centisome position: 97.94

GC content: 48.56

Gene sequence:

>1701_bases
ATGTGGTTTATCCGAAGAGTGTGTTTCGTGTTGGTCTTTTTAGGTCTGGTTGCCAGTGCGTGGCTTAAGCCGGCACCAAT
TGCTGCCCAAGCCCCATTGACAGGGGATCAAACAGCCCCCTTGTTGAACCCAGTGAGCGAGGGCACTCAACAAGATTTCG
AGGCTGGCCTCAATACCGCAAATGGTGCTGTGCTCTATCAAACGGCATCATATCCTGGGGTAAGTTTTCACCGACGTAAT
TCAACGGTAGGCTACGCCTACTACGGCGGTGGTTGTACCTATCTTACGGCGCTGAGCAGTGGGAACGAGGATAACAACGC
CCTTAGCACCCGCCTCGACATTCCCGACGGTGCGGTCATTCTAGGGGTTGAATTTCAATATCGCGATACCGACGCAGTTA
ATAATTCACGCTTATATCTCTATCGTTTTGATGGTGCTGGTGGCGTTGCTACAGTCGCATTATTAAATAGTAGTGGTAAT
GGTGGCTATGGCTCAAGCTATACTGCAACCAATCTCAATACCCTCTACGATGCCTTTAGCTATTCCTACTCGTTGGTTTG
GTACAGCGGCAGCGTTGGCATCAACCATGCACTTTGTGGTGCACGGGTAAAATATGCTTATAATCCGCCGGTTGCCCGAC
CATTCACGATGCCTCCTGCCAACCAACCAGATGCCTTACAAGGTGGTAGCAGCGGCTATAGTTTTACTGCCGCTAGCGAT
TTTGTAGCCTTTGAAGAGTCTGCTGCCTATAGTTATTCTAGTGCCGGTTGTATGATTCATACTGGTGGAGCCAACCTTGC
AGCTGAGGTTGATTTGGCTGATGGCACGCAATTGGCTGGCTATCGGGCATATTATTACAATACTGCCAGCGGCGCAGCGA
TGAATGCAAATCTGGTATGGATCGATGGCTCATCAACAAATACCGTTCTAATTGCATCTACCACAGCTAGTAGCGGTTTT
GCGAATGAGTATTTTGTGCCACCTTCGGCCCAGATTATTGATGAGTTCAGTAAAGGCTATCTGATGTATATTCGGCCTGG
AACGTCAACGACGACCAGAATGTGTGGTATTCGTACATTCTATACGACTCCGGTCCAAGCCAAGCAATTGCCAGTTTATA
TCAACCCGGTTAGCTCAGTCATTGCAGATCACGATGCCAGTGGCGTGCTATTAACCGAACAGCAGCCTGAATCAGCCCCG
ATCCAGAGCCTAGATCTAGGGACGGTTGAAGAACTAGCAAGCCCGCTGATTACCAATGAATACCAATTTGTCACAGCTCG
TTCATTTATGCCACGCGATAATGTCTATCTTGTGAACAGCGCCCCAGCTGGGTGTATTTCGTTTGGCTCTGATGCTGAGG
TAGACTATACCTTCCAATTGCCACCAAACAGTGGGCTACGAGGAATTCGCTTCTACTATCGTAATATTGCTGGCAATTTG
GGCAATGCGCGTTATTGGGCCTTCGATGGACGTGGCTGGTATAATCCAATTTTCACCTATGCGATTCCAACCTCAACGAA
CTATGCTTCGCAGTTGGTAAGCTATACTGGTTCGCACTACGATCTTTCCAATGGCAGTGTGGCCCATTCACTGAATTTCT
CGATCCTTAGCCCGAGCAATACGGTTGAGTTTTGTGGTGCTCGGATTTGGTACACCACCGGCCTGCGTTCGCTCTACATT
CCAGTTGCTTTCAAAAATTAA

Upstream 100 bases:

>100_bases
CTCAAACGCATGTAAATTGGCAAGATTTGTCATATCAAGGTCGTCTTCATGACGTATCGTTAACCTACCGGACTTTTCGT
CGTACTCTTGGAGGTAGTGT

Downstream 100 bases:

>100_bases
CCCTCATTCCTACAAAATCAAAGGCCGTAGCCAAACGCTACGGCCTTTTGGTTAATGTGAATTTTGGGTTTGGGGTTGTT
TGCGGGCCAAATAGAAAAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 566; Mature: 566

Protein sequence:

>566_residues
MWFIRRVCFVLVFLGLVASAWLKPAPIAAQAPLTGDQTAPLLNPVSEGTQQDFEAGLNTANGAVLYQTASYPGVSFHRRN
STVGYAYYGGGCTYLTALSSGNEDNNALSTRLDIPDGAVILGVEFQYRDTDAVNNSRLYLYRFDGAGGVATVALLNSSGN
GGYGSSYTATNLNTLYDAFSYSYSLVWYSGSVGINHALCGARVKYAYNPPVARPFTMPPANQPDALQGGSSGYSFTAASD
FVAFEESAAYSYSSAGCMIHTGGANLAAEVDLADGTQLAGYRAYYYNTASGAAMNANLVWIDGSSTNTVLIASTTASSGF
ANEYFVPPSAQIIDEFSKGYLMYIRPGTSTTTRMCGIRTFYTTPVQAKQLPVYINPVSSVIADHDASGVLLTEQQPESAP
IQSLDLGTVEELASPLITNEYQFVTARSFMPRDNVYLVNSAPAGCISFGSDAEVDYTFQLPPNSGLRGIRFYYRNIAGNL
GNARYWAFDGRGWYNPIFTYAIPTSTNYASQLVSYTGSHYDLSNGSVAHSLNFSILSPSNTVEFCGARIWYTTGLRSLYI
PVAFKN

Sequences:

>Translated_566_residues
MWFIRRVCFVLVFLGLVASAWLKPAPIAAQAPLTGDQTAPLLNPVSEGTQQDFEAGLNTANGAVLYQTASYPGVSFHRRN
STVGYAYYGGGCTYLTALSSGNEDNNALSTRLDIPDGAVILGVEFQYRDTDAVNNSRLYLYRFDGAGGVATVALLNSSGN
GGYGSSYTATNLNTLYDAFSYSYSLVWYSGSVGINHALCGARVKYAYNPPVARPFTMPPANQPDALQGGSSGYSFTAASD
FVAFEESAAYSYSSAGCMIHTGGANLAAEVDLADGTQLAGYRAYYYNTASGAAMNANLVWIDGSSTNTVLIASTTASSGF
ANEYFVPPSAQIIDEFSKGYLMYIRPGTSTTTRMCGIRTFYTTPVQAKQLPVYINPVSSVIADHDASGVLLTEQQPESAP
IQSLDLGTVEELASPLITNEYQFVTARSFMPRDNVYLVNSAPAGCISFGSDAEVDYTFQLPPNSGLRGIRFYYRNIAGNL
GNARYWAFDGRGWYNPIFTYAIPTSTNYASQLVSYTGSHYDLSNGSVAHSLNFSILSPSNTVEFCGARIWYTTGLRSLYI
PVAFKN
>Mature_566_residues
MWFIRRVCFVLVFLGLVASAWLKPAPIAAQAPLTGDQTAPLLNPVSEGTQQDFEAGLNTANGAVLYQTASYPGVSFHRRN
STVGYAYYGGGCTYLTALSSGNEDNNALSTRLDIPDGAVILGVEFQYRDTDAVNNSRLYLYRFDGAGGVATVALLNSSGN
GGYGSSYTATNLNTLYDAFSYSYSLVWYSGSVGINHALCGARVKYAYNPPVARPFTMPPANQPDALQGGSSGYSFTAASD
FVAFEESAAYSYSSAGCMIHTGGANLAAEVDLADGTQLAGYRAYYYNTASGAAMNANLVWIDGSSTNTVLIASTTASSGF
ANEYFVPPSAQIIDEFSKGYLMYIRPGTSTTTRMCGIRTFYTTPVQAKQLPVYINPVSSVIADHDASGVLLTEQQPESAP
IQSLDLGTVEELASPLITNEYQFVTARSFMPRDNVYLVNSAPAGCISFGSDAEVDYTFQLPPNSGLRGIRFYYRNIAGNL
GNARYWAFDGRGWYNPIFTYAIPTSTNYASQLVSYTGSHYDLSNGSVAHSLNFSILSPSNTVEFCGARIWYTTGLRSLYI
PVAFKN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60897; Mature: 60897

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWFIRRVCFVLVFLGLVASAWLKPAPIAAQAPLTGDQTAPLLNPVSEGTQQDFEAGLNTA
CHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCHHCCHHHHHHHCCCCC
NGAVLYQTASYPGVSFHRRNSTVGYAYYGGGCTYLTALSSGNEDNNALSTRLDIPDGAVI
CCEEEEEECCCCCCEEEECCCEEEEEEECCCEEEEEEECCCCCCCCEEEEEEECCCCEEE
LGVEFQYRDTDAVNNSRLYLYRFDGAGGVATVALLNSSGNGGYGSSYTATNLNTLYDAFS
EEEEEEECCCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCCCCCCEEECCHHHHHHHHC
YSYSLVWYSGSVGINHALCGARVKYAYNPPVARPFTMPPANQPDALQGGSSGYSFTAASD
CEEEEEEEECCCCCCEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCC
FVAFEESAAYSYSSAGCMIHTGGANLAAEVDLADGTQLAGYRAYYYNTASGAAMNANLVW
EEEEECCCCCEECCCCEEEEECCCCEEEEEEECCCCCCCEEEEEEEECCCCCEEECEEEE
IDGSSTNTVLIASTTASSGFANEYFVPPSAQIIDEFSKGYLMYIRPGTSTTTRMCGIRTF
EECCCCCEEEEEEECCCCCCCCCEECCCCHHHHHHHCCCEEEEEECCCCCCHHEEEEEEE
YTTPVQAKQLPVYINPVSSVIADHDASGVLLTEQQPESAPIQSLDLGTVEELASPLITNE
EECCCCCCCCCEEECCHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHCCHHCCC
YQFVTARSFMPRDNVYLVNSAPAGCISFGSDAEVDYTFQLPPNSGLRGIRFYYRNIAGNL
EEEEEEECCCCCCCEEEEECCCCCEEECCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCC
GNARYWAFDGRGWYNPIFTYAIPTSTNYASQLVSYTGSHYDLSNGSVAHSLNFSILSPSN
CCCEEEEECCCCCCCCEEEEEECCCCHHHHHHHHHCCCEEECCCCCEEEEEEEEEECCCC
TVEFCGARIWYTTGLRSLYIPVAFKN
CHHHCCCEEEEECCCEEEEEEEEECC
>Mature Secondary Structure
MWFIRRVCFVLVFLGLVASAWLKPAPIAAQAPLTGDQTAPLLNPVSEGTQQDFEAGLNTA
CHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCHHCCHHHHHHHCCCCC
NGAVLYQTASYPGVSFHRRNSTVGYAYYGGGCTYLTALSSGNEDNNALSTRLDIPDGAVI
CCEEEEEECCCCCCEEEECCCEEEEEEECCCEEEEEEECCCCCCCCEEEEEEECCCCEEE
LGVEFQYRDTDAVNNSRLYLYRFDGAGGVATVALLNSSGNGGYGSSYTATNLNTLYDAFS
EEEEEEECCCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCCCCCCEEECCHHHHHHHHC
YSYSLVWYSGSVGINHALCGARVKYAYNPPVARPFTMPPANQPDALQGGSSGYSFTAASD
CEEEEEEEECCCCCCEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCC
FVAFEESAAYSYSSAGCMIHTGGANLAAEVDLADGTQLAGYRAYYYNTASGAAMNANLVW
EEEEECCCCCEECCCCEEEEECCCCEEEEEEECCCCCCCEEEEEEEECCCCCEEECEEEE
IDGSSTNTVLIASTTASSGFANEYFVPPSAQIIDEFSKGYLMYIRPGTSTTTRMCGIRTF
EECCCCCEEEEEEECCCCCCCCCEECCCCHHHHHHHCCCEEEEEECCCCCCHHEEEEEEE
YTTPVQAKQLPVYINPVSSVIADHDASGVLLTEQQPESAPIQSLDLGTVEELASPLITNE
EECCCCCCCCCEEECCHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHCCHHCCC
YQFVTARSFMPRDNVYLVNSAPAGCISFGSDAEVDYTFQLPPNSGLRGIRFYYRNIAGNL
EEEEEEECCCCCCCEEEEECCCCCEEECCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCC
GNARYWAFDGRGWYNPIFTYAIPTSTNYASQLVSYTGSHYDLSNGSVAHSLNFSILSPSN
CCCEEEEECCCCCCCCEEEEEECCCCHHHHHHHHHCCCEEECCCCCEEEEEEEEEECCCC
TVEFCGARIWYTTGLRSLYIPVAFKN
CHHHCCCEEEEECCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA