The gene/protein map for NC_009972 is currently unavailable.
Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

Click here to switch to the map view.

The map label for this gene is 159901384

Identifier: 159901384

GI number: 159901384

Start: 6208289

End: 6208753

Strand: Reverse

Name: 159901384

Synonym: Haur_4873

Alternate gene names: NA

Gene position: 6208753-6208289 (Counterclockwise)

Preceding gene: 159901387

Following gene: 159901381

Centisome position: 97.83

GC content: 49.03

Gene sequence:

>465_bases
ATGTTGAGAAAAAGTATCATCACCATCGTAGGAGGTAGTATTCTGATCTGTGTGTTGCTCATGGTGTTTGAGCCAGTTCA
AGCGTATGCAACACTTGGCCCAATCGACGATTTTCCAATCTATTTGGATAGTTCCAATGTTCGGCATAATGGCCAGGCTA
TGCATTATGTTGTATTACGCAAGCTAGAACCACACGAACTGGAAGATTTCTACATCGCTGCGCTAGCCAAGCGTGATTGG
CATATGCAACCAACGACGATCAATCAGCCACCGGCCAGCTTGCGCTTTCGGCATGCCTCAATCACGGGCATTGTCGAGCT
GACAATTTCGCATCATCATGGTGGGTATCAGCCAGATTGGAGCGAGGTGGATGCCCGTTATGTTGACGCACAGCTCAGGC
CAGTTACAGCGCCTCCATTAAATATCCGTTGGCACGTCAATCGCTTTGGCTGTGGTGGGGCGTAA

Upstream 100 bases:

>100_bases
CTTGCAACGATTCTGCTCTGAATCTGCTACTTATGCTGGCCATGGTTGGCTATACTCAGAACTGAGTGGAATAGCGAATT
TGATTGAATTGGAGAGAGCC

Downstream 100 bases:

>100_bases
TGGGCCTGCTTCAGCGGTGGCCCAAAAGTCGGGGTCAAGGGTCAGAGGTCAAGAGCCAGCTCAAAACTAGCCATTCTAGC
CCCTGACCCCTCAAAGATTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MLRKSIITIVGGSILICVLLMVFEPVQAYATLGPIDDFPIYLDSSNVRHNGQAMHYVVLRKLEPHELEDFYIAALAKRDW
HMQPTTINQPPASLRFRHASITGIVELTISHHHGGYQPDWSEVDARYVDAQLRPVTAPPLNIRWHVNRFGCGGA

Sequences:

>Translated_154_residues
MLRKSIITIVGGSILICVLLMVFEPVQAYATLGPIDDFPIYLDSSNVRHNGQAMHYVVLRKLEPHELEDFYIAALAKRDW
HMQPTTINQPPASLRFRHASITGIVELTISHHHGGYQPDWSEVDARYVDAQLRPVTAPPLNIRWHVNRFGCGGA
>Mature_154_residues
MLRKSIITIVGGSILICVLLMVFEPVQAYATLGPIDDFPIYLDSSNVRHNGQAMHYVVLRKLEPHELEDFYIAALAKRDW
HMQPTTINQPPASLRFRHASITGIVELTISHHHGGYQPDWSEVDARYVDAQLRPVTAPPLNIRWHVNRFGCGGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17379; Mature: 17379

Theoretical pI: Translated: 7.32; Mature: 7.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRKSIITIVGGSILICVLLMVFEPVQAYATLGPIDDFPIYLDSSNVRHNGQAMHYVVLR
CCCHHEEEHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCEEEEEEEE
KLEPHELEDFYIAALAKRDWHMQPTTINQPPASLRFRHASITGIVELTISHHHGGYQPDW
CCCCCCCHHHHHEEEHHCCCCCCCCCCCCCCCCEEEEECEEEEEEEEEEECCCCCCCCCH
SEVDARYVDAQLRPVTAPPLNIRWHVNRFGCGGA
HHCCCEEECCEECCCCCCCCEEEEEEEECCCCCC
>Mature Secondary Structure
MLRKSIITIVGGSILICVLLMVFEPVQAYATLGPIDDFPIYLDSSNVRHNGQAMHYVVLR
CCCHHEEEHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCEEEEEEEE
KLEPHELEDFYIAALAKRDWHMQPTTINQPPASLRFRHASITGIVELTISHHHGGYQPDW
CCCCCCCHHHHHEEEHHCCCCCCCCCCCCCCCCEEEEECEEEEEEEEEEECCCCCCCCCH
SEVDARYVDAQLRPVTAPPLNIRWHVNRFGCGGA
HHCCCEEECCEECCCCCCCCEEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA