Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159901379

Identifier: 159901379

GI number: 159901379

Start: 6202438

End: 6203046

Strand: Reverse

Name: 159901379

Synonym: Haur_4868

Alternate gene names: NA

Gene position: 6203046-6202438 (Counterclockwise)

Preceding gene: 159901381

Following gene: 159901378

Centisome position: 97.74

GC content: 53.2

Gene sequence:

>609_bases
ATGCAATCACCAGCAAAACAATGGCTTCGTCGCAGCATCCGCGGGCTACTCGCCAGCTTGTGTTTGGCAGCGGTAATTTT
TATCAGTACGGGCTATATTGTCTATCGCCAAGCCCAACGAGCTGAATTACGCCCCGTTGATGCCTTGTTGGTGCTCGGCG
CGGCCCAATGGGATGGCGAGCCATCGCCAGTTTTGGAAGCGCGGCTGACCGAAGCAATTCGTCTGTATCGCTTGGGTTAT
GCCCGCCGAATCATTGTTTCGGGTGGCACTGGCCTCAACGATACGCGCTCAGAAGCCTCAGTTGCCTACGATTATTTGAT
CGAACACTCAATTGATCCAACCTTGATCATCAGCGTGGCCCAAGGCAGCGATACCCGTAGCACCTTGTTGGCAGTCCACG
ATGAAATGCAGCGCCAGCAGATCGATAGTTTATTGATCGTGACCGACCCGCCGCACCTACTACGAGCACTCAAAATGGCC
CACGACTATGGCATTACGAGCTTTGGAGCGCCCGTCAAAGCCAATAGCCCAACTACGAATTGGGCTAGTATCAAAGCTAC
CAGTCGCGAAGCCTTGGCCTACCTCGCCTATGTACTCTTAGATCAATAA

Upstream 100 bases:

>100_bases
TCTATGTTATGATGCTAAAATTGTAGCAGAGATTGCGCCGCAACTGGCTTGAGCGTGGTAGGATAGCGCGTAAAGCAGCA
AACTAAGGCAAAGGATCGCA

Downstream 100 bases:

>100_bases
GATCATGACTTTTGGGATACCATAAACTGAGCATCCGTGCGTCAAAGTCAGCGTATGTGCTTTCAGAGGAGGCCACACGA
TGATGACAGTACACTCTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MQSPAKQWLRRSIRGLLASLCLAAVIFISTGYIVYRQAQRAELRPVDALLVLGAAQWDGEPSPVLEARLTEAIRLYRLGY
ARRIIVSGGTGLNDTRSEASVAYDYLIEHSIDPTLIISVAQGSDTRSTLLAVHDEMQRQQIDSLLIVTDPPHLLRALKMA
HDYGITSFGAPVKANSPTTNWASIKATSREALAYLAYVLLDQ

Sequences:

>Translated_202_residues
MQSPAKQWLRRSIRGLLASLCLAAVIFISTGYIVYRQAQRAELRPVDALLVLGAAQWDGEPSPVLEARLTEAIRLYRLGY
ARRIIVSGGTGLNDTRSEASVAYDYLIEHSIDPTLIISVAQGSDTRSTLLAVHDEMQRQQIDSLLIVTDPPHLLRALKMA
HDYGITSFGAPVKANSPTTNWASIKATSREALAYLAYVLLDQ
>Mature_202_residues
MQSPAKQWLRRSIRGLLASLCLAAVIFISTGYIVYRQAQRAELRPVDALLVLGAAQWDGEPSPVLEARLTEAIRLYRLGY
ARRIIVSGGTGLNDTRSEASVAYDYLIEHSIDPTLIISVAQGSDTRSTLLAVHDEMQRQQIDSLLIVTDPPHLLRALKMA
HDYGITSFGAPVKANSPTTNWASIKATSREALAYLAYVLLDQ

Specific function: Unknown

COG id: COG1434

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22234; Mature: 22234

Theoretical pI: Translated: 8.42; Mature: 8.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSPAKQWLRRSIRGLLASLCLAAVIFISTGYIVYRQAQRAELRPVDALLVLGAAQWDGE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEECCHHCCCCCHHHHHEEECCCCCCC
PSPVLEARLTEAIRLYRLGYARRIIVSGGTGLNDTRSEASVAYDYLIEHSIDPTLIISVA
CCHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEE
QGSDTRSTLLAVHDEMQRQQIDSLLIVTDPPHLLRALKMAHDYGITSFGAPVKANSPTTN
CCCCCHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
WASIKATSREALAYLAYVLLDQ
CEEEEHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQSPAKQWLRRSIRGLLASLCLAAVIFISTGYIVYRQAQRAELRPVDALLVLGAAQWDGE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEECCHHCCCCCHHHHHEEECCCCCCC
PSPVLEARLTEAIRLYRLGYARRIIVSGGTGLNDTRSEASVAYDYLIEHSIDPTLIISVA
CCHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEE
QGSDTRSTLLAVHDEMQRQQIDSLLIVTDPPHLLRALKMAHDYGITSFGAPVKANSPTTN
CCCCCHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
WASIKATSREALAYLAYVLLDQ
CEEEEHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA