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The map label for this gene is ypaA [H]

Identifier: 159901349

GI number: 159901349

Start: 6167664

End: 6168035

Strand: Direct

Name: ypaA [H]

Synonym: Haur_4838

Alternate gene names: 159901349

Gene position: 6167664-6168035 (Clockwise)

Preceding gene: 159901348

Following gene: 159901350

Centisome position: 97.18

GC content: 44.62

Gene sequence:

>372_bases
ATGGCAATCGTTAGTTTAATTTTGGTGGGCTTGGTGGCGGTCGAACATATTTATATTTTGTATCTTGAAATGTTTGCCTG
GACGCAGCCGCGCACCATGAAATCGTTTGGTTTAACGCCGGAGTTTGCCCAACAATCCAAATCGTTAGCTGCCAACCAAG
GCTTATACAATGGTTTTTTAGCGGCTGGCTTAATTTGGGGCTTGGTGCATCCCGATGCCGAGTTTGGCTTGCAGATTCAA
CTCTTTTTTGTGCTTTGTGTGGTTGTGGCGGCAATTTATGGTGGATTAACCGCCAAACGCTCAATTTTATTCATTCAAGG
TGGTCCGGCAATTGTGGCTTTGGTGGCTTTGCTAATCCACATGTTTGTTTAA

Upstream 100 bases:

>100_bases
TTGACTTTTGCGGTACTATAGCTAGCTAGTTGCTACCAATCGGCAGACACTGATTTGGCAACTGATGAGCTTGTTGGAAT
CTAGTATAAGGTGGTGAGTG

Downstream 100 bases:

>100_bases
TTGCTTAGAAAATCTTTAAGTTTTCTTCATTATTGTTTGGTATGCTGCTTGGGCGGTTTTATGCACAAGGAGGCATCTAT
GGATAATGACGATCAACCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 123; Mature: 122

Protein sequence:

>123_residues
MAIVSLILVGLVAVEHIYILYLEMFAWTQPRTMKSFGLTPEFAQQSKSLAANQGLYNGFLAAGLIWGLVHPDAEFGLQIQ
LFFVLCVVVAAIYGGLTAKRSILFIQGGPAIVALVALLIHMFV

Sequences:

>Translated_123_residues
MAIVSLILVGLVAVEHIYILYLEMFAWTQPRTMKSFGLTPEFAQQSKSLAANQGLYNGFLAAGLIWGLVHPDAEFGLQIQ
LFFVLCVVVAAIYGGLTAKRSILFIQGGPAIVALVALLIHMFV
>Mature_122_residues
AIVSLILVGLVAVEHIYILYLEMFAWTQPRTMKSFGLTPEFAQQSKSLAANQGLYNGFLAAGLIWGLVHPDAEFGLQIQL
FFVLCVVVAAIYGGLTAKRSILFIQGGPAIVALVALLIHMFV

Specific function: Unknown

COG id: COG3759

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009732 [H]

Pfam domain/function: PF06993 DUF1304 [H]

EC number: NA

Molecular weight: Translated: 13367; Mature: 13236

Theoretical pI: Translated: 7.60; Mature: 7.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIVSLILVGLVAVEHIYILYLEMFAWTQPRTMKSFGLTPEFAQQSKSLAANQGLYNGFL
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHCCHHHHHH
AAGLIWGLVHPDAEFGLQIQLFFVLCVVVAAIYGGLTAKRSILFIQGGPAIVALVALLIH
HHHHHHHHCCCCHHHCHHHHHHHHHHHHHHHHHCCHHCCCEEEEEECCHHHHHHHHHHHH
MFV
HHC
>Mature Secondary Structure 
AIVSLILVGLVAVEHIYILYLEMFAWTQPRTMKSFGLTPEFAQQSKSLAANQGLYNGFL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHCCHHHHHH
AAGLIWGLVHPDAEFGLQIQLFFVLCVVVAAIYGGLTAKRSILFIQGGPAIVALVALLIH
HHHHHHHHCCCCHHHCHHHHHHHHHHHHHHHHHCCHHCCCEEEEEECCHHHHHHHHHHHH
MFV
HHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1400208; 11337471 [H]