| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159901345
Identifier: 159901345
GI number: 159901345
Start: 6164184
End: 6164957
Strand: Direct
Name: 159901345
Synonym: Haur_4834
Alternate gene names: NA
Gene position: 6164184-6164957 (Clockwise)
Preceding gene: 159901344
Following gene: 159901348
Centisome position: 97.13
GC content: 52.2
Gene sequence:
>774_bases ATGAGCTTAGTTTTAGCCTCAGCTTGGCAGCCACGCGGCGAATTAGCCCGTTTTGAGCGGCTTTTACCTCAATTAAGCCA ATTGTATCGAGCAATTGTAATCACCACGCCGCCAACAATTGATGCTCAATTGCTGCAAAGCCTCAACGAACTGCCAAATG TTAAGGCCGTGCCAACCACTGAATGGTTTCAAGGCCGCCACTTGGCCTTGGCCGAAGCACTCAAAACTCAACCAAACTAT ATTCATGCAATTGATTTTGATCGGGCATTGCGCTGGATCGAAACACGCCCCAGTGAATTGACCAGCATTGCCCAACGTTC ACAAACCCATTGTTTAATTATTGGCCGCACTTGGCAAGCCTACGCCACCCACGCCCGCGCCTTGATCGAAACTGAGCGAA CCAGCAATACAATGGCCTCATTTTTCCTTGGCATGCCGATGGATATTAGTGCTGGCGCACGCGGCTTTACGCCAGTTGCG GCGCATTTTATTTTGGCCAATAGCCCGCCGCTTGATGCGCTGGGCACTGATGCCGAATGGCCTGTTTTGTTGCATCGTGG CGGCTTCAAGCTGAATTATTGCGAAGTTGATGGCCTCGATTGGGAGATCCCCGACCAATTTCAGGCCCAAGCTGCTGATG CTGAAGCTCAGCAAAGCCAAGCCGCACACTACGATAGCCAGATCGAGCATTGGCGCTATCGGGTCGAAGTTGCTCAGCGC ATTGTGCAAGCTGGAATTGCCGCCGCCCGCCGACCCTTGCAGTTTCTCTCTTAA
Upstream 100 bases:
>100_bases CGCAGATCGATATCGTTTATACTGTGGGCATCAACGAATGGAATGGGCGCAGTTCGGTGCAACTTACGCTGGTCGATTTG CGCTTGAGTGAAGGGCAACG
Downstream 100 bases:
>100_bases AGCAAAACCGCGCTCCACCGAATGGAACGCGGCGCAGTAATCAGCACTAATTTAGCGGAAGCTCTCGGTAATATCGCGCA CTTCCTCGTATTTGGCTTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 257; Mature: 256
Protein sequence:
>257_residues MSLVLASAWQPRGELARFERLLPQLSQLYRAIVITTPPTIDAQLLQSLNELPNVKAVPTTEWFQGRHLALAEALKTQPNY IHAIDFDRALRWIETRPSELTSIAQRSQTHCLIIGRTWQAYATHARALIETERTSNTMASFFLGMPMDISAGARGFTPVA AHFILANSPPLDALGTDAEWPVLLHRGGFKLNYCEVDGLDWEIPDQFQAQAADAEAQQSQAAHYDSQIEHWRYRVEVAQR IVQAGIAAARRPLQFLS
Sequences:
>Translated_257_residues MSLVLASAWQPRGELARFERLLPQLSQLYRAIVITTPPTIDAQLLQSLNELPNVKAVPTTEWFQGRHLALAEALKTQPNY IHAIDFDRALRWIETRPSELTSIAQRSQTHCLIIGRTWQAYATHARALIETERTSNTMASFFLGMPMDISAGARGFTPVA AHFILANSPPLDALGTDAEWPVLLHRGGFKLNYCEVDGLDWEIPDQFQAQAADAEAQQSQAAHYDSQIEHWRYRVEVAQR IVQAGIAAARRPLQFLS >Mature_256_residues SLVLASAWQPRGELARFERLLPQLSQLYRAIVITTPPTIDAQLLQSLNELPNVKAVPTTEWFQGRHLALAEALKTQPNYI HAIDFDRALRWIETRPSELTSIAQRSQTHCLIIGRTWQAYATHARALIETERTSNTMASFFLGMPMDISAGARGFTPVAA HFILANSPPLDALGTDAEWPVLLHRGGFKLNYCEVDGLDWEIPDQFQAQAADAEAQQSQAAHYDSQIEHWRYRVEVAQRI VQAGIAAARRPLQFLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28853; Mature: 28722
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLVLASAWQPRGELARFERLLPQLSQLYRAIVITTPPTIDAQLLQSLNELPNVKAVPTT CCEEECCCCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHCCCCCCCCCH EWFQGRHLALAEALKTQPNYIHAIDFDRALRWIETRPSELTSIAQRSQTHCLIIGRTWQA HHHCCCHHHHHHHHHCCCCEEEEECHHHHHHHHHCCHHHHHHHHHCCCCEEEEEECCHHH YATHARALIETERTSNTMASFFLGMPMDISAGARGFTPVAAHFILANSPPLDALGTDAEW HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHEEECCCCCCCCCCCCCCC PVLLHRGGFKLNYCEVDGLDWEIPDQFQAQAADAEAQQSQAAHYDSQIEHWRYRVEVAQR CEEEECCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IVQAGIAAARRPLQFLS HHHHHHHHHHHHHHHCC >Mature Secondary Structure SLVLASAWQPRGELARFERLLPQLSQLYRAIVITTPPTIDAQLLQSLNELPNVKAVPTT CEEECCCCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHCCCCCCCCCH EWFQGRHLALAEALKTQPNYIHAIDFDRALRWIETRPSELTSIAQRSQTHCLIIGRTWQA HHHCCCHHHHHHHHHCCCCEEEEECHHHHHHHHHCCHHHHHHHHHCCCCEEEEEECCHHH YATHARALIETERTSNTMASFFLGMPMDISAGARGFTPVAAHFILANSPPLDALGTDAEW HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHEEECCCCCCCCCCCCCCC PVLLHRGGFKLNYCEVDGLDWEIPDQFQAQAADAEAQQSQAAHYDSQIEHWRYRVEVAQR CEEEECCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IVQAGIAAARRPLQFLS HHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA