Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159901324

Identifier: 159901324

GI number: 159901324

Start: 6141042

End: 6141668

Strand: Direct

Name: 159901324

Synonym: Haur_4813

Alternate gene names: NA

Gene position: 6141042-6141668 (Clockwise)

Preceding gene: 159901323

Following gene: 159901326

Centisome position: 96.76

GC content: 51.83

Gene sequence:

>627_bases
ATGCAAACAACAATTCATTTTCTTTCTGCCGATGGCAGCACGTTACTTGAGGGCAAATGGCTAGCGCTCAGCCAAGCGCC
ACAATTGGTTGCCGTGTTGGCCCATCATTTTCCACCAATGTCGAATATGGATCAGCGGGCGATTTTCGCAACCTTCAAGG
TGTTGCGCGATCGTGGTTGGGGGGTTTTGCGCTACAACTCGCGTGGAGTTGGCCAAAGCCAAGGCGAATTTAGCGGTGGC
CCAGGCGAAGATCTCGATTTGCAGGCAGCGTTGGCCGAAGCGCGTCAACGTGCACCGCAAGCTCAAATCTGCTTAATTGG
CTGGTCGTTTGGGGCACAATTGGTACTACGGGTGATGGCCAGCGACCCAACGATTCGCGCAACCGTGGCAGTTACGCCCA
ACCCAGTTGGTTTGCAGGAGAGTGCCCAAGGCCAGCATGGACCGTTATTAGCAATTGTGGCTGAGCGCGATCAATTTTTC
GATTTGATTGAAACGCGCACGGCCTTTGAACAAGCGACTGAGCCAAAAACCTGGCATTTGCTCAAATGGGCCGATCATTA
TTATCTAACTCGTGAAGATGAAGTTGCGCAATTCACGGTCGATTGGCTTGAACAAGCGGTTAAATAA

Upstream 100 bases:

>100_bases
GTACCCTCGGCAATCTGGACGGTTAATTTGGCTGAAAATTCAGAGCCACGGGTGTTGATCGAAAATGCCACCCAAGCTCG
TTGGATCGTTGAGTAGGATG

Downstream 100 bases:

>100_bases
CAACACGGAGCAGTAAATCCTGCTCCGTGTATTCAACAAAGCTAAACTAGGGTGCGCCAGCGCTCCACATATGGGCTGCG
CTCGATCCAGAGTGCGCCCA

Product: alpha/beta fold family hydrolase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MQTTIHFLSADGSTLLEGKWLALSQAPQLVAVLAHHFPPMSNMDQRAIFATFKVLRDRGWGVLRYNSRGVGQSQGEFSGG
PGEDLDLQAALAEARQRAPQAQICLIGWSFGAQLVLRVMASDPTIRATVAVTPNPVGLQESAQGQHGPLLAIVAERDQFF
DLIETRTAFEQATEPKTWHLLKWADHYYLTREDEVAQFTVDWLEQAVK

Sequences:

>Translated_208_residues
MQTTIHFLSADGSTLLEGKWLALSQAPQLVAVLAHHFPPMSNMDQRAIFATFKVLRDRGWGVLRYNSRGVGQSQGEFSGG
PGEDLDLQAALAEARQRAPQAQICLIGWSFGAQLVLRVMASDPTIRATVAVTPNPVGLQESAQGQHGPLLAIVAERDQFF
DLIETRTAFEQATEPKTWHLLKWADHYYLTREDEVAQFTVDWLEQAVK
>Mature_208_residues
MQTTIHFLSADGSTLLEGKWLALSQAPQLVAVLAHHFPPMSNMDQRAIFATFKVLRDRGWGVLRYNSRGVGQSQGEFSGG
PGEDLDLQAALAEARQRAPQAQICLIGWSFGAQLVLRVMASDPTIRATVAVTPNPVGLQESAQGQHGPLLAIVAERDQFF
DLIETRTAFEQATEPKTWHLLKWADHYYLTREDEVAQFTVDWLEQAVK

Specific function: Unknown

COG id: COG2945

COG function: function code R; Predicted hydrolase of the alpha/beta superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000383 [H]

Pfam domain/function: PF02129 Peptidase_S15 [H]

EC number: NA

Molecular weight: Translated: 23098; Mature: 23098

Theoretical pI: Translated: 5.57; Mature: 5.57

Prosite motif: PS00120 LIPASE_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTTIHFLSADGSTLLEGKWLALSQAPQLVAVLAHHFPPMSNMDQRAIFATFKVLRDRGW
CCCEEEEEECCCCEEECCEEEEECCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCC
GVLRYNSRGVGQSQGEFSGGPGEDLDLQAALAEARQRAPQAQICLIGWSFGAQLVLRVMA
EEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHC
SDPTIRATVAVTPNPVGLQESAQGQHGPLLAIVAERDQFFDLIETRTAFEQATEPKTWHL
CCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCEEEE
LKWADHYYLTREDEVAQFTVDWLEQAVK
EEECCCEEEECCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQTTIHFLSADGSTLLEGKWLALSQAPQLVAVLAHHFPPMSNMDQRAIFATFKVLRDRGW
CCCEEEEEECCCCEEECCEEEEECCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCC
GVLRYNSRGVGQSQGEFSGGPGEDLDLQAALAEARQRAPQAQICLIGWSFGAQLVLRVMA
EEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHC
SDPTIRATVAVTPNPVGLQESAQGQHGPLLAIVAERDQFFDLIETRTAFEQATEPKTWHL
CCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCEEEE
LKWADHYYLTREDEVAQFTVDWLEQAVK
EEECCCEEEECCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]