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The map label for this gene is parB [H]

Identifier: 159901320

GI number: 159901320

Start: 6133951

End: 6134919

Strand: Reverse

Name: parB [H]

Synonym: Haur_4808

Alternate gene names: 159901320

Gene position: 6134919-6133951 (Counterclockwise)

Preceding gene: 159901321

Following gene: 159901319

Centisome position: 96.66

GC content: 53.97

Gene sequence:

>969_bases
ATGAACCCCAAAAAACGTGGTTTGGGCCAAGGTTTAGGTGCGTTGATTCGCCCTGATCCTACAACATCAATGCCAATGGT
CGGCGCATTACATAGCGTGCCAATCGAATCAATCGAGGCGAATCCGCATCAGCCGCGCCAAATTTTTACCCCCGAAGCGC
TCGAAGAATTGAGCGCTTCAATTGCGACCCATGGAATTTTGCAACCTTTGGTGGTGACGCGCACCGCGACTGGCTATGAG
TTGATCGCTGGCGAACGCCGCTGGCGGGCAGCTCAACAAGCTGGGTTAAGCGAAGTTCCGGTGATCATCAAAGAGGTTAC
GCCCCAAGAGCGGCTTGAATTGGCCTTGGTTGAAAATATCCAGCGAGCCGATCTCAACCCATTGGAAGAAGCTCAAGCCT
ACCAATTGTTACACGATGAGTTTAGCTTGAGCCATCAAGCCATTGCCGAGCGGGTTGGCAAAAGCCGCCCTGCGATCACC
AATGCGCTGCGTTTGCTCAAATTGCCCTCGCCCTTGCAACAAGCAGTGATGGAGCAGCAACTCACGGCGGGGCATCTCAA
GCAGTTAATCACGATCGATGATGAGCGCACCCAGATTTTGGCGATGGAGCAAATTCTAGAGTTTCGGCTTTCGGTGCGCG
AGGCCGAAAAAATGGCCCAGTTGATTAAACACGAAAGCCAAACCCCAGCGCAAGCCAGAATCGCCATTCAGCAACGCGGC
GCGGCTCCCCGTGCATCGCGGCGCAACGGTGCACCAACGCCAGCCGCCCCAACCCGCAACAGCATCCCAGCCGAGCCAGT
CGTGCCTAATGTTGACGATACGGCAGCGGTCGATCAACTGACCCGTCAACTTGGCACAAAAGTTGAAGTTAAACGCCAAG
GCAATGGCGGCTATGTCCGCATCGATTTCTACTCCGATGAGCAACTGATTGCCTTGATTGAATCATTGCTCAATGGAGAA
ACCTTGTGA

Upstream 100 bases:

>100_bases
CCAGCCATGGCCAAACGATTCGCGAGTATGATCCAGCGAGTAAGGGCGCGATGGCCTATGCCATGCTGGTCGATGAACTA
AGTCGCAGGCTGGAGGCGGC

Downstream 100 bases:

>100_bases
GGAGCCTATGGCCAGCGATTCATTGCATATTGCCCTCGTATGGCCATACGATGCGGCCTACGCTGGCGGGGTAACCGAGC
ATGTCAATCAACTAACCCAC

Product: parB-like partition protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 322; Mature: 322

Protein sequence:

>322_residues
MNPKKRGLGQGLGALIRPDPTTSMPMVGALHSVPIESIEANPHQPRQIFTPEALEELSASIATHGILQPLVVTRTATGYE
LIAGERRWRAAQQAGLSEVPVIIKEVTPQERLELALVENIQRADLNPLEEAQAYQLLHDEFSLSHQAIAERVGKSRPAIT
NALRLLKLPSPLQQAVMEQQLTAGHLKQLITIDDERTQILAMEQILEFRLSVREAEKMAQLIKHESQTPAQARIAIQQRG
AAPRASRRNGAPTPAAPTRNSIPAEPVVPNVDDTAAVDQLTRQLGTKVEVKRQGNGGYVRIDFYSDEQLIALIESLLNGE
TL

Sequences:

>Translated_322_residues
MNPKKRGLGQGLGALIRPDPTTSMPMVGALHSVPIESIEANPHQPRQIFTPEALEELSASIATHGILQPLVVTRTATGYE
LIAGERRWRAAQQAGLSEVPVIIKEVTPQERLELALVENIQRADLNPLEEAQAYQLLHDEFSLSHQAIAERVGKSRPAIT
NALRLLKLPSPLQQAVMEQQLTAGHLKQLITIDDERTQILAMEQILEFRLSVREAEKMAQLIKHESQTPAQARIAIQQRG
AAPRASRRNGAPTPAAPTRNSIPAEPVVPNVDDTAAVDQLTRQLGTKVEVKRQGNGGYVRIDFYSDEQLIALIESLLNGE
TL
>Mature_322_residues
MNPKKRGLGQGLGALIRPDPTTSMPMVGALHSVPIESIEANPHQPRQIFTPEALEELSASIATHGILQPLVVTRTATGYE
LIAGERRWRAAQQAGLSEVPVIIKEVTPQERLELALVENIQRADLNPLEEAQAYQLLHDEFSLSHQAIAERVGKSRPAIT
NALRLLKLPSPLQQAVMEQQLTAGHLKQLITIDDERTQILAMEQILEFRLSVREAEKMAQLIKHESQTPAQARIAIQQRG
AAPRASRRNGAPTPAAPTRNSIPAEPVVPNVDDTAAVDQLTRQLGTKVEVKRQGNGGYVRIDFYSDEQLIALIESLLNGE
TL

Specific function: Involved in chromosome partition. Localize to both poles of the predivisional cell following completion of DNA replication. Binds to the DNA origin of replication [H]

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004437
- InterPro:   IPR003115
- InterPro:   IPR013741 [H]

Pfam domain/function: PF08535 KorB; PF02195 ParBc [H]

EC number: NA

Molecular weight: Translated: 35369; Mature: 35369

Theoretical pI: Translated: 6.42; Mature: 6.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPKKRGLGQGLGALIRPDPTTSMPMVGALHSVPIESIEANPHQPRQIFTPEALEELSAS
CCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCHHHCCCCCCCCCCCCCHHHHHHHHHH
IATHGILQPLVVTRTATGYELIAGERRWRAAQQAGLSEVPVIIKEVTPQERLELALVENI
HHHHHHHHHHHHHCCCCCHHHHHCHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHHH
QRADLNPLEEAQAYQLLHDEFSLSHQAIAERVGKSRPAITNALRLLKLPSPLQQAVMEQQ
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHH
LTAGHLKQLITIDDERTQILAMEQILEFRLSVREAEKMAQLIKHESQTPAQARIAIQQRG
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCC
AAPRASRRNGAPTPAAPTRNSIPAEPVVPNVDDTAAVDQLTRQLGTKVEVKRQGNGGYVR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEECCCCCEEE
IDFYSDEQLIALIESLLNGETL
EEEECCHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNPKKRGLGQGLGALIRPDPTTSMPMVGALHSVPIESIEANPHQPRQIFTPEALEELSAS
CCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCHHHCCCCCCCCCCCCCHHHHHHHHHH
IATHGILQPLVVTRTATGYELIAGERRWRAAQQAGLSEVPVIIKEVTPQERLELALVENI
HHHHHHHHHHHHHCCCCCHHHHHCHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHHH
QRADLNPLEEAQAYQLLHDEFSLSHQAIAERVGKSRPAITNALRLLKLPSPLQQAVMEQQ
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHH
LTAGHLKQLITIDDERTQILAMEQILEFRLSVREAEKMAQLIKHESQTPAQARIAIQQRG
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCC
AAPRASRRNGAPTPAAPTRNSIPAEPVVPNVDDTAAVDQLTRQLGTKVEVKRQGNGGYVR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEECCCCCEEE
IDFYSDEQLIALIESLLNGETL
EEEECCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]