Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

Click here to switch to the map view.

The map label for this gene is 159901312

Identifier: 159901312

GI number: 159901312

Start: 6118159

End: 6118854

Strand: Reverse

Name: 159901312

Synonym: Haur_4800

Alternate gene names: NA

Gene position: 6118854-6118159 (Counterclockwise)

Preceding gene: 159901313

Following gene: 159901311

Centisome position: 96.41

GC content: 50.43

Gene sequence:

>696_bases
ATGGCTGGCCCGTTGGTTTTGCAAGTTGGTGATTGTACCGTTGCTTGTTCGTATGCGTTGCCACATCAGCGTGGCGATGC
CTTGCTCCAAACCCGTTTGCGTAGCGTCTTTGCCGACGAAACGCTTGTCCATAACGAAGGCTTAGATGGCGAAGCAACCG
AGGATTTTCTCAAGCGCTACGATCGCACGATGGCTCGCTATCCCGAAATCGATCTGATTATTGTGCGTTATGGCGTGAAT
GATCGCAAGCGCTACGGCATTGGGCCATTCGAAGCCAAATTGATCGAGCTTTGCGATTTGTTTGAGCGCGATTATCCTCA
AGCCAAAATCATCTTGGAAACAGGCATTTACGTCGATTATCCGGCGCATTATGCCTTTGATCGCAACTCCAAGCTAGAGC
CAGTGTATCGGATGATTGCCAAACTTGCCCAGCAGCGTGGCTATGCGGTGGTCGATATTTTCGAACGCATGAAGCGTGAA
ACCCAACAAGGCAACTGGGATCTACGGGCGCGTGGTTTTGGCTCGGTCGATGAGGATTTTCCGGTGTTGGGGCCAGCGCT
TGATCATATTCATGGCCATGATGTACGCTGGTTTACCAACATTCACCCAAATATCCAAGGCATCCAAACGATTGTTGATG
AAGAAATCTCCGTAATTACCCAAACCTGGCCAACTGGGTTGCGGGCAATAGCGTGA

Upstream 100 bases:

>100_bases
TCATGCTAAAAGTTGTCAAAACTAGGCGAGAACGCTATACTGCCGTATGTGATGTTTGCTGTGGATGCCGCAAATATCAA
CGTTTCGGCGGAGGTTCTGG

Downstream 100 bases:

>100_bases
GGAGTATTATGCAGCAGGTTCCTTCGACGCATGTGCGTCATCCAATGTGGCCAATTTATCTCTGCGTTGCGGTTACTGCC
CTTGGAATTGGGATCATCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 230

Protein sequence:

>231_residues
MAGPLVLQVGDCTVACSYALPHQRGDALLQTRLRSVFADETLVHNEGLDGEATEDFLKRYDRTMARYPEIDLIIVRYGVN
DRKRYGIGPFEAKLIELCDLFERDYPQAKIILETGIYVDYPAHYAFDRNSKLEPVYRMIAKLAQQRGYAVVDIFERMKRE
TQQGNWDLRARGFGSVDEDFPVLGPALDHIHGHDVRWFTNIHPNIQGIQTIVDEEISVITQTWPTGLRAIA

Sequences:

>Translated_231_residues
MAGPLVLQVGDCTVACSYALPHQRGDALLQTRLRSVFADETLVHNEGLDGEATEDFLKRYDRTMARYPEIDLIIVRYGVN
DRKRYGIGPFEAKLIELCDLFERDYPQAKIILETGIYVDYPAHYAFDRNSKLEPVYRMIAKLAQQRGYAVVDIFERMKRE
TQQGNWDLRARGFGSVDEDFPVLGPALDHIHGHDVRWFTNIHPNIQGIQTIVDEEISVITQTWPTGLRAIA
>Mature_230_residues
AGPLVLQVGDCTVACSYALPHQRGDALLQTRLRSVFADETLVHNEGLDGEATEDFLKRYDRTMARYPEIDLIIVRYGVND
RKRYGIGPFEAKLIELCDLFERDYPQAKIILETGIYVDYPAHYAFDRNSKLEPVYRMIAKLAQQRGYAVVDIFERMKRET
QQGNWDLRARGFGSVDEDFPVLGPALDHIHGHDVRWFTNIHPNIQGIQTIVDEEISVITQTWPTGLRAIA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26425; Mature: 26294

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGPLVLQVGDCTVACSYALPHQRGDALLQTRLRSVFADETLVHNEGLDGEATEDFLKRY
CCCCEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHCCHHEECCCCCCCHHHHHHHHH
DRTMARYPEIDLIIVRYGVNDRKRYGIGPFEAKLIELCDLFERDYPQAKIILETGIYVDY
HHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEC
PAHYAFDRNSKLEPVYRMIAKLAQQRGYAVVDIFERMKRETQQGNWDLRARGFGSVDEDF
CCCEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCC
PVLGPALDHIHGHDVRWFTNIHPNIQGIQTIVDEEISVITQTWPTGLRAIA
CCCCHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHCC
>Mature Secondary Structure 
AGPLVLQVGDCTVACSYALPHQRGDALLQTRLRSVFADETLVHNEGLDGEATEDFLKRY
CCCEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHCCHHEECCCCCCCHHHHHHHHH
DRTMARYPEIDLIIVRYGVNDRKRYGIGPFEAKLIELCDLFERDYPQAKIILETGIYVDY
HHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEC
PAHYAFDRNSKLEPVYRMIAKLAQQRGYAVVDIFERMKRETQQGNWDLRARGFGSVDEDF
CCCEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCC
PVLGPALDHIHGHDVRWFTNIHPNIQGIQTIVDEEISVITQTWPTGLRAIA
CCCCHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA