| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159901304
Identifier: 159901304
GI number: 159901304
Start: 6108220
End: 6109212
Strand: Direct
Name: 159901304
Synonym: Haur_4792
Alternate gene names: NA
Gene position: 6108220-6109212 (Clockwise)
Preceding gene: 159901303
Following gene: 159901305
Centisome position: 96.24
GC content: 52.27
Gene sequence:
>993_bases ATGTTAACCCTTCAAGATAACTATGGTGATCTCCTCACCAAGGGGGCGAAGCTCGTGCGTGCCACCACAGAATCATCTCC GGATGATGAACAGTATAGGAGAATCATAAAAGCCATGGTGAGGATTCGGGTTGAAGGCGACGTACGAGCGGAAGTTCTTG CGTTCAAGCAATCGCTGGAGGCCCACGCCGAGAGTATCCAGTTTCAGCCGATCACGGCGGTTGGAGAGCGGTTCGTGGCC TACGGTGCGGTGTTACGTCGTGCCACGCCATCGAACATTGAGCACTTTATCGATATCCTGCGGCGCTTTAATGAGAAGGT TGATACGCTGTTGGGCTTATCCTTTGTCCAGCACATCAGGCGCGAGAACGAAGCCAAACGATGGGAAGGGCGCACCTACC ACCGTCGGAAGCGATCTAAATGGAAATTGTCCTTTATCCAGTCGCTAGTAAAACGTCGGAACGAAGCCAAAATACGAGCT TCATGTGCAGCCAACGACCAGTATCTGTCCAATGCGATAGCTCTAGGACCCAGATCCGAAGCAACCGCTGCGTTTGTGCT GACCATGCGGTGCTTCCTCGACGATACTGAAGAATGTTCGCTGGAAAACCTCGCGCACTACTATCAGGATGCAACGATTG GCACCGAGCATGCCCGTTTTTATCTCGCGAATCGAAACGTATACAATATTGCGTTGGATGGAGTTACGGAGCTGATTGAT CGGGAGCAAGTCGTCGATACCGATGGAAACGTGATCGGCAGTATCGAAACGCCGCTCACCCAGCGGCAGGTGTTTGATCT GTGGGTCTATGGGGGGCTCTCACACGCCAACCTAACCAAAAAACAGCAGTTTGATGCGCTCTTTGGTGACCCCGCGACGC GGGCTATGCTCAGACAGAGCTTTGTTGATTGGCTGGATGAGTATTGCGGTCTTTTGACGGCGCAGAGCTATGTTAACAAA GCGATGCTCCTAGAGCTGGAAAAGCATGGTTGA
Upstream 100 bases:
>100_bases TCCCGACAAAACTTCCCTGGCGAACAAGGGCTCTTTTGTGGTGATCGCGATTAGCGCGTATAACGTGAGCATGCCCAAAC TCAGTTCTGGGGTGTCAGGA
Downstream 100 bases:
>100_bases GGGGTGGTGAGGATTCCCTCGAAAATACGCATTCTGAAGAGCATGAAAAAGTGGGAAGCAGCCTCAAGGGTTGGCTGCTC CCGCTATAAATTGATGGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 330; Mature: 330
Protein sequence:
>330_residues MLTLQDNYGDLLTKGAKLVRATTESSPDDEQYRRIIKAMVRIRVEGDVRAEVLAFKQSLEAHAESIQFQPITAVGERFVA YGAVLRRATPSNIEHFIDILRRFNEKVDTLLGLSFVQHIRRENEAKRWEGRTYHRRKRSKWKLSFIQSLVKRRNEAKIRA SCAANDQYLSNAIALGPRSEATAAFVLTMRCFLDDTEECSLENLAHYYQDATIGTEHARFYLANRNVYNIALDGVTELID REQVVDTDGNVIGSIETPLTQRQVFDLWVYGGLSHANLTKKQQFDALFGDPATRAMLRQSFVDWLDEYCGLLTAQSYVNK AMLLELEKHG
Sequences:
>Translated_330_residues MLTLQDNYGDLLTKGAKLVRATTESSPDDEQYRRIIKAMVRIRVEGDVRAEVLAFKQSLEAHAESIQFQPITAVGERFVA YGAVLRRATPSNIEHFIDILRRFNEKVDTLLGLSFVQHIRRENEAKRWEGRTYHRRKRSKWKLSFIQSLVKRRNEAKIRA SCAANDQYLSNAIALGPRSEATAAFVLTMRCFLDDTEECSLENLAHYYQDATIGTEHARFYLANRNVYNIALDGVTELID REQVVDTDGNVIGSIETPLTQRQVFDLWVYGGLSHANLTKKQQFDALFGDPATRAMLRQSFVDWLDEYCGLLTAQSYVNK AMLLELEKHG >Mature_330_residues MLTLQDNYGDLLTKGAKLVRATTESSPDDEQYRRIIKAMVRIRVEGDVRAEVLAFKQSLEAHAESIQFQPITAVGERFVA YGAVLRRATPSNIEHFIDILRRFNEKVDTLLGLSFVQHIRRENEAKRWEGRTYHRRKRSKWKLSFIQSLVKRRNEAKIRA SCAANDQYLSNAIALGPRSEATAAFVLTMRCFLDDTEECSLENLAHYYQDATIGTEHARFYLANRNVYNIALDGVTELID REQVVDTDGNVIGSIETPLTQRQVFDLWVYGGLSHANLTKKQQFDALFGDPATRAMLRQSFVDWLDEYCGLLTAQSYVNK AMLLELEKHG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37743; Mature: 37743
Theoretical pI: Translated: 7.61; Mature: 7.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTLQDNYGDLLTKGAKLVRATTESSPDDEQYRRIIKAMVRIRVEGDVRAEVLAFKQSLE CEEECCCHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH AHAESIQFQPITAVGERFVAYGAVLRRATPSNIEHFIDILRRFNEKVDTLLGLSFVQHIR HHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RENEAKRWEGRTYHRRKRSKWKLSFIQSLVKRRNEAKIRASCAANDQYLSNAIALGPRSE HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHCCCCCCH ATAAFVLTMRCFLDDTEECSLENLAHYYQDATIGTEHARFYLANRNVYNIALDGVTELID HHHHHHHHHHHHHCCCHHCCHHHHHHHHHCCCCCCCHHEEEEECCCEEEEEHHHHHHHHH REQVVDTDGNVIGSIETPLTQRQVFDLWVYGGLSHANLTKKQQFDALFGDPATRAMLRQS HHHHCCCCCCEEECCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHH FVDWLDEYCGLLTAQSYVNKAMLLELEKHG HHHHHHHHHHHHHHHHHHHHHHHEEECCCC >Mature Secondary Structure MLTLQDNYGDLLTKGAKLVRATTESSPDDEQYRRIIKAMVRIRVEGDVRAEVLAFKQSLE CEEECCCHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH AHAESIQFQPITAVGERFVAYGAVLRRATPSNIEHFIDILRRFNEKVDTLLGLSFVQHIR HHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RENEAKRWEGRTYHRRKRSKWKLSFIQSLVKRRNEAKIRASCAANDQYLSNAIALGPRSE HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHCCCCCCH ATAAFVLTMRCFLDDTEECSLENLAHYYQDATIGTEHARFYLANRNVYNIALDGVTELID HHHHHHHHHHHHHCCCHHCCHHHHHHHHHCCCCCCCHHEEEEECCCEEEEEHHHHHHHHH REQVVDTDGNVIGSIETPLTQRQVFDLWVYGGLSHANLTKKQQFDALFGDPATRAMLRQS HHHHCCCCCCEEECCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHH FVDWLDEYCGLLTAQSYVNKAMLLELEKHG HHHHHHHHHHHHHHHHHHHHHHHEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA