| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159901295
Identifier: 159901295
GI number: 159901295
Start: 6099548
End: 6100129
Strand: Reverse
Name: 159901295
Synonym: Haur_4783
Alternate gene names: NA
Gene position: 6100129-6099548 (Counterclockwise)
Preceding gene: 159901307
Following gene: 159901294
Centisome position: 96.12
GC content: 50.34
Gene sequence:
>582_bases ATGTTTTCGCAACGAACCAATAGCCCACCCCCGGCCCTGATTGGGGTGATTATTGGGCTAGTGTTAATTTTTTTGGTTTC AACTCGTTCTTGTAACCCTGATAGTGAGCAGACGCTCCGCAGCCGTTTTGCCGAAGCTAACGCTACTCAAGTGGCCAGCC AGAATCTTGGTACACCCCTGATTCCATTACCAGCCCCAGTGCAGGAATGGAGTTCAACCGCGATTGCACGACTGCAAGGC GGCGAGGCGGTAGTGCCAATTACGCCCGTTGTTACCAACGATAAGCTCAAAGTCGATATTCAATCGCTTCAACAAGTGGG CGAGGGCTTACAAATTAAAGGTGTCGTTACCAATATTAGCAGCAAAGAATTACGCGTACCATTGGCAGCCTTCCGCTTTA CCGACCAATCGGGCACCGTCTATGCTGCTCAAGGCGATGCAGCGGCGAATTTGCCGCCCAACGCCAACACAACGCTTGAT CTCACGTTGCCGATCAAGAATCCAACCGCATTAACCATGGTTGTCGAAATTCCTGCCGAGGAGATTCGGCTGGAAGTTAA TTTACTTGCGCAACAACAATAA
Upstream 100 bases:
>100_bases AAACATGGATTTTTGTCCTATGATTGGGGTATTACCTGGATGATTATGTTTGGCTAAAAGCGCGGTACAATACTCGTTAC GATTGTGCTGGAGGTTGATG
Downstream 100 bases:
>100_bases GTTTAAGGAGTTTTCATGACCCGTCAAAAGGGACGTGGTGCGCGTGAACAGAATCGGGCTGATCGGCGCAACGAATATGC AACCCTAGTTGCTCCACATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 193; Mature: 193
Protein sequence:
>193_residues MFSQRTNSPPPALIGVIIGLVLIFLVSTRSCNPDSEQTLRSRFAEANATQVASQNLGTPLIPLPAPVQEWSSTAIARLQG GEAVVPITPVVTNDKLKVDIQSLQQVGEGLQIKGVVTNISSKELRVPLAAFRFTDQSGTVYAAQGDAAANLPPNANTTLD LTLPIKNPTALTMVVEIPAEEIRLEVNLLAQQQ
Sequences:
>Translated_193_residues MFSQRTNSPPPALIGVIIGLVLIFLVSTRSCNPDSEQTLRSRFAEANATQVASQNLGTPLIPLPAPVQEWSSTAIARLQG GEAVVPITPVVTNDKLKVDIQSLQQVGEGLQIKGVVTNISSKELRVPLAAFRFTDQSGTVYAAQGDAAANLPPNANTTLD LTLPIKNPTALTMVVEIPAEEIRLEVNLLAQQQ >Mature_193_residues MFSQRTNSPPPALIGVIIGLVLIFLVSTRSCNPDSEQTLRSRFAEANATQVASQNLGTPLIPLPAPVQEWSSTAIARLQG GEAVVPITPVVTNDKLKVDIQSLQQVGEGLQIKGVVTNISSKELRVPLAAFRFTDQSGTVYAAQGDAAANLPPNANTTLD LTLPIKNPTALTMVVEIPAEEIRLEVNLLAQQQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20559; Mature: 20559
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSQRTNSPPPALIGVIIGLVLIFLVSTRSCNPDSEQTLRSRFAEANATQVASQNLGTPL CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHCCCCCC IPLPAPVQEWSSTAIARLQGGEAVVPITPVVTNDKLKVDIQSLQQVGEGLQIKGVVTNIS CCCCCCHHHHCCHHEEEECCCCEEEEEECEEECCEEEEEHHHHHHHCCCEEEEEEEECCC SKELRVPLAAFRFTDQSGTVYAAQGDAAANLPPNANTTLDLTLPIKNPTALTMVVEIPAE CCCEECEEEHEEEECCCCEEEEECCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEECCHH EIRLEVNLLAQQQ HEEEEEEEEECCC >Mature Secondary Structure MFSQRTNSPPPALIGVIIGLVLIFLVSTRSCNPDSEQTLRSRFAEANATQVASQNLGTPL CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHCCCCCC IPLPAPVQEWSSTAIARLQGGEAVVPITPVVTNDKLKVDIQSLQQVGEGLQIKGVVTNIS CCCCCCHHHHCCHHEEEECCCCEEEEEECEEECCEEEEEHHHHHHHCCCEEEEEEEECCC SKELRVPLAAFRFTDQSGTVYAAQGDAAANLPPNANTTLDLTLPIKNPTALTMVVEIPAE CCCEECEEEHEEEECCCCEEEEECCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEECCHH EIRLEVNLLAQQQ HEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA