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The map label for this gene is yjbG [H]

Identifier: 159901263

GI number: 159901263

Start: 6058133

End: 6059950

Strand: Reverse

Name: yjbG [H]

Synonym: Haur_4751

Alternate gene names: 159901263

Gene position: 6059950-6058133 (Counterclockwise)

Preceding gene: 159901264

Following gene: 159901258

Centisome position: 95.48

GC content: 51.05

Gene sequence:

>1818_bases
ATGACAACCGCCGCAACAGTGCCAAGCCGTCAGGAAGTAGCCCTCGCCGATACTTGGGATGCAACCAAAGTTTTCGCTTC
TGATGCTGAATGGGAACAAGCACTTGATGCCTATGCCCAATCGATCGCCGACATCGAGCAATACCAAGGCCGTTTGGCTG
AAGGCCCAGCAACGCTTTTAGCCGCGCTGAATTATTCCGATCAGCTTAACGAGCGGGTTGGCAAGCTCTATATTTATGCC
AGCCTGTTTTATAGCGTCGATACCACCGACCAAGTAGCCAAAGCCAAAATGGATCGGGTGTTGGGGGTTTATTCGCGCAC
CATGGCTAGCTCGGCGTTTATCGAGCCAGAAATTATTGCGATTGGCTTTGCAACGCTCAAGCAATGGCAAGCCGAAAACG
CCGATTTGGCTCGCTATGGTCAATATTTTCATGATGTTGAGCGGCGGCAAGCTCATGTGCGTTCAGCCGAAGTTGAACAA
GTATTGGGCTTGGTCAGCGATGCGTTCGATTCTGCCAGTTCAACCCATCGCATTTTGACCGATGCTGATTTGGCCTATCC
CGCAGCCCATAGCACGAATGGGCTTGAATTAGAGCTAACTCAAGGCACAATTGGCCTGTTGGTCACCGACCCTGATCGGG
AGGTGCGCCGCACAGCCTTTGAAAACTACAGCGATGCCCATCTGGCCAACAAAAATACCATGGCCAATTGTTTGGCGACT
TGTGTCAAGCAGCATGTCTTCAATGCTCGCGTGCGCAACTATAGCTCAGCTTTAGCCGCCGCCCTTGGCGAAAACAACAT
CCCAACCGATGTCTTTCATCAATTGGTTGCCACGGTGCGCAAAAACTACCCAACTTGGCATCGCTACTGGCGCTTACGCC
GTCAAGCCTTGGGCTATGATCAATTGCATGTCTACGACATCAAAGCGCCATTAACCACCAAAAAGCTTGAAATCCCTTAC
ACTGAAGCCGTCGATTGGATTATTACGGGGATGCAGCCGTTGGGCGAAGGCTACACCAGCGTGGCCAAACGTGGCCTGTT
AGAAGATCGCTGGGTTGATATTTACCCTAACAAAGGCAAGAGTGCTGGGGCATTTTCGAGTGGTTGGAAGGGCACGCCAC
CTTATATCTTGATGAACTACAACAACGATATTTTTGGGATGAGCACCTTGGCCCACGAGCTTGGTCACTCGATGCACTCG
TATTTGACCTGGCAAAACCAGCCAACAATTTATAGCAACTATGGTTTGTTTGTGGCCGAAGTAGCTTCAAACTTCAATCA
AGCTCTAGTTCGCAACCACCTGTTTAATACCAACCAAGACCCCGATTTCCAAATTGCCTTGATCGAAGAAGCCATGAGCA
ATTTCCATCGCTATTTCTTCATCATGCCAATTTTGGCCCAATTTGAGCTAGAAATCCACGAGCGTGGTCAGCGTGGCGAA
CCATTAACCGCTGCAACCCTCAACGGCATCATGTTCGATCTGTTCCGTGAAGGCTATGGCGAGGAAGTTGTGCCCGATGC
TGATCGTATGGGGATTACCTGGGCAACCTTCTCGGGCCATATGTATGCCAACTTCTATGTCTATCAATATGCCACGGGGA
TTGCCGCCGCTCATGCGTTGGCCGAGGGGGTATTGGCGGGCAAGCCCGATGCCCAAGCCAACTATTTGGCCTTCTTGAGT
GCTGGTAGCTCGTTAGCACCATTGGATGCGCTGAAATTGGCTGGGGTCGATATGACTTCCGCCGAGCCAGTTGAAGCCGC
CTTCCGCGTGCTGGCCAGCTATGTTGATCGCCTAGAACAATTGCTGGGCAATCAATAA

Upstream 100 bases:

>100_bases
GACATTGAGGATGATTTTGGCGATGATCACGATGATTTTGATGATGACGATGAATAATCGTTGCCAATTGCAATAGCCTG
TGTGTTGAAGGAGTTTTGGA

Downstream 100 bases:

>100_bases
TTCCTTCCCTCACACCAACCCCTCTCCCACTGCGGCGGGAGAGGGGCTTTTTGATCTCATTTTCCCCCTTGCTCGCTGGG
CGGGAGAGGAGATCAGGGGG

Product: oligoendopeptidase F

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 605; Mature: 604

Protein sequence:

>605_residues
MTTAATVPSRQEVALADTWDATKVFASDAEWEQALDAYAQSIADIEQYQGRLAEGPATLLAALNYSDQLNERVGKLYIYA
SLFYSVDTTDQVAKAKMDRVLGVYSRTMASSAFIEPEIIAIGFATLKQWQAENADLARYGQYFHDVERRQAHVRSAEVEQ
VLGLVSDAFDSASSTHRILTDADLAYPAAHSTNGLELELTQGTIGLLVTDPDREVRRTAFENYSDAHLANKNTMANCLAT
CVKQHVFNARVRNYSSALAAALGENNIPTDVFHQLVATVRKNYPTWHRYWRLRRQALGYDQLHVYDIKAPLTTKKLEIPY
TEAVDWIITGMQPLGEGYTSVAKRGLLEDRWVDIYPNKGKSAGAFSSGWKGTPPYILMNYNNDIFGMSTLAHELGHSMHS
YLTWQNQPTIYSNYGLFVAEVASNFNQALVRNHLFNTNQDPDFQIALIEEAMSNFHRYFFIMPILAQFELEIHERGQRGE
PLTAATLNGIMFDLFREGYGEEVVPDADRMGITWATFSGHMYANFYVYQYATGIAAAHALAEGVLAGKPDAQANYLAFLS
AGSSLAPLDALKLAGVDMTSAEPVEAAFRVLASYVDRLEQLLGNQ

Sequences:

>Translated_605_residues
MTTAATVPSRQEVALADTWDATKVFASDAEWEQALDAYAQSIADIEQYQGRLAEGPATLLAALNYSDQLNERVGKLYIYA
SLFYSVDTTDQVAKAKMDRVLGVYSRTMASSAFIEPEIIAIGFATLKQWQAENADLARYGQYFHDVERRQAHVRSAEVEQ
VLGLVSDAFDSASSTHRILTDADLAYPAAHSTNGLELELTQGTIGLLVTDPDREVRRTAFENYSDAHLANKNTMANCLAT
CVKQHVFNARVRNYSSALAAALGENNIPTDVFHQLVATVRKNYPTWHRYWRLRRQALGYDQLHVYDIKAPLTTKKLEIPY
TEAVDWIITGMQPLGEGYTSVAKRGLLEDRWVDIYPNKGKSAGAFSSGWKGTPPYILMNYNNDIFGMSTLAHELGHSMHS
YLTWQNQPTIYSNYGLFVAEVASNFNQALVRNHLFNTNQDPDFQIALIEEAMSNFHRYFFIMPILAQFELEIHERGQRGE
PLTAATLNGIMFDLFREGYGEEVVPDADRMGITWATFSGHMYANFYVYQYATGIAAAHALAEGVLAGKPDAQANYLAFLS
AGSSLAPLDALKLAGVDMTSAEPVEAAFRVLASYVDRLEQLLGNQ
>Mature_604_residues
TTAATVPSRQEVALADTWDATKVFASDAEWEQALDAYAQSIADIEQYQGRLAEGPATLLAALNYSDQLNERVGKLYIYAS
LFYSVDTTDQVAKAKMDRVLGVYSRTMASSAFIEPEIIAIGFATLKQWQAENADLARYGQYFHDVERRQAHVRSAEVEQV
LGLVSDAFDSASSTHRILTDADLAYPAAHSTNGLELELTQGTIGLLVTDPDREVRRTAFENYSDAHLANKNTMANCLATC
VKQHVFNARVRNYSSALAAALGENNIPTDVFHQLVATVRKNYPTWHRYWRLRRQALGYDQLHVYDIKAPLTTKKLEIPYT
EAVDWIITGMQPLGEGYTSVAKRGLLEDRWVDIYPNKGKSAGAFSSGWKGTPPYILMNYNNDIFGMSTLAHELGHSMHSY
LTWQNQPTIYSNYGLFVAEVASNFNQALVRNHLFNTNQDPDFQIALIEEAMSNFHRYFFIMPILAQFELEIHERGQRGEP
LTAATLNGIMFDLFREGYGEEVVPDADRMGITWATFSGHMYANFYVYQYATGIAAAHALAEGVLAGKPDAQANYLAFLSA
GSSLAPLDALKLAGVDMTSAEPVEAAFRVLASYVDRLEQLLGNQ

Specific function: Unknown

COG id: COG1164

COG function: function code E; Oligoendopeptidase F

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M3B family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001567
- InterPro:   IPR004438
- InterPro:   IPR013647 [H]

Pfam domain/function: PF01432 Peptidase_M3; PF08439 Peptidase_M3_N [H]

EC number: NA

Molecular weight: Translated: 67376; Mature: 67245

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTAATVPSRQEVALADTWDATKVFASDAEWEQALDAYAQSIADIEQYQGRLAEGPATLL
CCCCCCCCCCCCEEEECCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
AALNYSDQLNERVGKLYIYASLFYSVDTTDQVAKAKMDRVLGVYSRTMASSAFIEPEIIA
HHHCCHHHHHHHHHHEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE
IGFATLKQWQAENADLARYGQYFHDVERRQAHVRSAEVEQVLGLVSDAFDSASSTHRILT
EEHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE
DADLAYPAAHSTNGLELELTQGTIGLLVTDPDREVRRTAFENYSDAHLANKNTMANCLAT
CCCCCCCCCCCCCCEEEEEECCEEEEEEECCCHHHHHHHHCCCCCCHHCCCHHHHHHHHH
CVKQHVFNARVRNYSSALAAALGENNIPTDVFHQLVATVRKNYPTWHRYWRLRRQALGYD
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC
QLHVYDIKAPLTTKKLEIPYTEAVDWIITGMQPLGEGYTSVAKRGLLEDRWVDIYPNKGK
CEEEEEECCCCCCCEEECCHHHHHHHHHHCCCHHCCCHHHHHHCCCCCCCCEEECCCCCC
SAGAFSSGWKGTPPYILMNYNNDIFGMSTLAHELGHSMHSYLTWQNQPTIYSNYGLFVAE
CCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHEEECCCCCEEECCCHHHHH
VASNFNQALVRNHLFNTNQDPDFQIALIEEAMSNFHRYFFIMPILAQFELEIHERGQRGE
HHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PLTAATLNGIMFDLFREGYGEEVVPDADRMGITWATFSGHMYANFYVYQYATGIAAAHAL
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCEEEEEEEEHHHHHHHHHHHH
AEGVLAGKPDAQANYLAFLSAGSSLAPLDALKLAGVDMTSAEPVEAAFRVLASYVDRLEQ
HHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
LLGNQ
HHCCC
>Mature Secondary Structure 
TTAATVPSRQEVALADTWDATKVFASDAEWEQALDAYAQSIADIEQYQGRLAEGPATLL
CCCCCCCCCCCEEEECCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
AALNYSDQLNERVGKLYIYASLFYSVDTTDQVAKAKMDRVLGVYSRTMASSAFIEPEIIA
HHHCCHHHHHHHHHHEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE
IGFATLKQWQAENADLARYGQYFHDVERRQAHVRSAEVEQVLGLVSDAFDSASSTHRILT
EEHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE
DADLAYPAAHSTNGLELELTQGTIGLLVTDPDREVRRTAFENYSDAHLANKNTMANCLAT
CCCCCCCCCCCCCCEEEEEECCEEEEEEECCCHHHHHHHHCCCCCCHHCCCHHHHHHHHH
CVKQHVFNARVRNYSSALAAALGENNIPTDVFHQLVATVRKNYPTWHRYWRLRRQALGYD
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC
QLHVYDIKAPLTTKKLEIPYTEAVDWIITGMQPLGEGYTSVAKRGLLEDRWVDIYPNKGK
CEEEEEECCCCCCCEEECCHHHHHHHHHHCCCHHCCCHHHHHHCCCCCCCCEEECCCCCC
SAGAFSSGWKGTPPYILMNYNNDIFGMSTLAHELGHSMHSYLTWQNQPTIYSNYGLFVAE
CCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHEEECCCCCEEECCCHHHHH
VASNFNQALVRNHLFNTNQDPDFQIALIEEAMSNFHRYFFIMPILAQFELEIHERGQRGE
HHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PLTAATLNGIMFDLFREGYGEEVVPDADRMGITWATFSGHMYANFYVYQYATGIAAAHAL
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCEEEEEEEEHHHHHHHHHHHH
AEGVLAGKPDAQANYLAFLSAGSSLAPLDALKLAGVDMTSAEPVEAAFRVLASYVDRLEQ
HHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
LLGNQ
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]