Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159901252

Identifier: 159901252

GI number: 159901252

Start: 6049524

End: 6050159

Strand: Direct

Name: 159901252

Synonym: Haur_4740

Alternate gene names: NA

Gene position: 6049524-6050159 (Clockwise)

Preceding gene: 159901249

Following gene: 159901253

Centisome position: 95.32

GC content: 52.04

Gene sequence:

>636_bases
ATGATGGATAAGCTCCCACATACGTTTTATCGCCGCCGTTTTGTTGATGGTCGCCATCATGTGTTCCATTCGTATGGATT
CGGGCGGGTTGTCCGCAACGATGCTGAGTTGTTAGTCTATGATTGGTCGCTTGGTACGCCGCAACGGATTACCGATACGC
TGGGTTGGGGCAGCGATGCGCCGCGCACGCGTTTGTTTGATCAACGAGCTTCTCGCGCCTTTGGGCGTTCGTGGTGGTGG
CGTTCACGACCACTCAACATCACCAGCATGTATGATGAACGCGGCAATTTGATTGTGCAACGCATCGATTTTGCCAGCAA
AGCTATGGATATTAGCGGCAGCTTTTACCAAACCGATCTCTACCTCGATTGTTTTGTCGCCGCCAATGGCACAACCCACG
TCGTTGAAGATGAAGATGAAGTGATCGAGGCCGAGGAAGTTGGTTTGCTCAGCCAAGCTCAACGAGTGATGATTGAAACA
GAGCTCGATACAGTGCGCAATTTGCTGCGTAATGGCACATGGCTGAGTTGGCTCGAAGCCGCCGCTGGCGCACCATTTGA
TCGCACATTTTTGCCCAAAGCTCGTAACTACGATGGTTTTTGGCAATCGCGGGCGAGCTATTGGCCGGAGGATTAA

Upstream 100 bases:

>100_bases
AGATGTATCATTACTTTAGCAGGCAAGTGGCAGATTTCGCCGAACTACGGCCATCTGCTATACTGTAGGGATAGAAAGCC
ACCTGCATTTAGGGAAGACC

Downstream 100 bases:

>100_bases
CATGGCGCTCGATTGTAGTGTCGTGATTATTTCATGGAATGTGGCAGATTTGTTGCGCCAATGTTTGGACTCGATCAGCC
AATCGCTAGCAGGCAGCAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MMDKLPHTFYRRRFVDGRHHVFHSYGFGRVVRNDAELLVYDWSLGTPQRITDTLGWGSDAPRTRLFDQRASRAFGRSWWW
RSRPLNITSMYDERGNLIVQRIDFASKAMDISGSFYQTDLYLDCFVAANGTTHVVEDEDEVIEAEEVGLLSQAQRVMIET
ELDTVRNLLRNGTWLSWLEAAAGAPFDRTFLPKARNYDGFWQSRASYWPED

Sequences:

>Translated_211_residues
MMDKLPHTFYRRRFVDGRHHVFHSYGFGRVVRNDAELLVYDWSLGTPQRITDTLGWGSDAPRTRLFDQRASRAFGRSWWW
RSRPLNITSMYDERGNLIVQRIDFASKAMDISGSFYQTDLYLDCFVAANGTTHVVEDEDEVIEAEEVGLLSQAQRVMIET
ELDTVRNLLRNGTWLSWLEAAAGAPFDRTFLPKARNYDGFWQSRASYWPED
>Mature_211_residues
MMDKLPHTFYRRRFVDGRHHVFHSYGFGRVVRNDAELLVYDWSLGTPQRITDTLGWGSDAPRTRLFDQRASRAFGRSWWW
RSRPLNITSMYDERGNLIVQRIDFASKAMDISGSFYQTDLYLDCFVAANGTTHVVEDEDEVIEAEEVGLLSQAQRVMIET
ELDTVRNLLRNGTWLSWLEAAAGAPFDRTFLPKARNYDGFWQSRASYWPED

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24615; Mature: 24615

Theoretical pI: Translated: 5.66; Mature: 5.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMDKLPHTFYRRRFVDGRHHVFHSYGFGRVVRNDAELLVYDWSLGTPQRITDTLGWGSDA
CCCCCHHHHHHHHHCCCHHHHHHHCCCCCEEECCCEEEEEECCCCCCHHHHHHHCCCCCC
PRTRLFDQRASRAFGRSWWWRSRPLNITSMYDERGNLIVQRIDFASKAMDISGSFYQTDL
CHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCEEEEEEHHHHHHHCCCCCEEEEEE
YLDCFVAANGTTHVVEDEDEVIEAEEVGLLSQAQRVMIETELDTVRNLLRNGTWLSWLEA
EEEEEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
AAGAPFDRTFLPKARNYDGFWQSRASYWPED
HCCCCCCCCCCCCCCCCCCHHHHHCCCCCCC
>Mature Secondary Structure
MMDKLPHTFYRRRFVDGRHHVFHSYGFGRVVRNDAELLVYDWSLGTPQRITDTLGWGSDA
CCCCCHHHHHHHHHCCCHHHHHHHCCCCCEEECCCEEEEEECCCCCCHHHHHHHCCCCCC
PRTRLFDQRASRAFGRSWWWRSRPLNITSMYDERGNLIVQRIDFASKAMDISGSFYQTDL
CHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCEEEEEEHHHHHHHCCCCCEEEEEE
YLDCFVAANGTTHVVEDEDEVIEAEEVGLLSQAQRVMIETELDTVRNLLRNGTWLSWLEA
EEEEEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
AAGAPFDRTFLPKARNYDGFWQSRASYWPED
HCCCCCCCCCCCCCCCCCCHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA