| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is bcp [H]
Identifier: 159901234
GI number: 159901234
Start: 6032270
End: 6032737
Strand: Reverse
Name: bcp [H]
Synonym: Haur_4722
Alternate gene names: 159901234
Gene position: 6032737-6032270 (Counterclockwise)
Preceding gene: 159901235
Following gene: 159901233
Centisome position: 95.05
GC content: 47.86
Gene sequence:
>468_bases ATGACAACTGCAACTGCTGGCAAATTAGCCGTTGGCGATCAAGCCCCAACTTTCAGCCTGCCCAACCAAACTGGCCAACT CGTCGATTTACAAAGTTTGCTTGGCCACAAGAAAATCGTCTTATTTTTCTATCCCAAGGATCATTCGGCTGGCTGCGTGG CCGAAGTATGTGCCTTTCGCGATCAATATGAGGTGTTCAAGCAAGCGGGAGCCGAAGTCATTGGTATCAGCAGCGATTCG GTCGAGTCGCACGAAAAGTTTGCTGCTAATAATCGTTTACCATTTACCTTGCTGAGTGATCGTGATGGTACGGTGCGCAA ACTCTATGGGGCAACCACTTTAGGCATTTTGGCAGGCCGGGTCACCTATATTATCGACCACCATGGCACAATTCAGCATA TCTTTTCATCATTGCTGAACGCCAACAAACACATTAGCGAAGCGCTGCGCATCATCAAAGAAGCTTAA
Upstream 100 bases:
>100_bases ACGATTCAGCATATTTTCTCATCGCGCTTGAATGCCCAAAAACACATCGACGAATCATTACGCATTTTGCAACAAGCATA GGATTTGGAGGATTAAGTTT
Downstream 100 bases:
>100_bases GGTGATGTGGCTATAGGCTATTGATCGTTGGCTATCGGAGTTTGATTGGAACTACCAATAATTATTCCGCTAGTCAATAA CTGTAATGGTTTATCGCATT
Product: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen
Products: NA
Alternate protein names: Bacterioferritin comigratory protein; Thioredoxin reductase [H]
Number of amino acids: Translated: 155; Mature: 154
Protein sequence:
>155_residues MTTATAGKLAVGDQAPTFSLPNQTGQLVDLQSLLGHKKIVLFFYPKDHSAGCVAEVCAFRDQYEVFKQAGAEVIGISSDS VESHEKFAANNRLPFTLLSDRDGTVRKLYGATTLGILAGRVTYIIDHHGTIQHIFSSLLNANKHISEALRIIKEA
Sequences:
>Translated_155_residues MTTATAGKLAVGDQAPTFSLPNQTGQLVDLQSLLGHKKIVLFFYPKDHSAGCVAEVCAFRDQYEVFKQAGAEVIGISSDS VESHEKFAANNRLPFTLLSDRDGTVRKLYGATTLGILAGRVTYIIDHHGTIQHIFSSLLNANKHISEALRIIKEA >Mature_154_residues TTATAGKLAVGDQAPTFSLPNQTGQLVDLQSLLGHKKIVLFFYPKDHSAGCVAEVCAFRDQYEVFKQAGAEVIGISSDSV ESHEKFAANNRLPFTLLSDRDGTVRKLYGATTLGILAGRVTYIIDHHGTIQHIFSSLLNANKHISEALRIIKEA
Specific function: Unknown
COG id: COG1225
COG function: function code O; Peroxiredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Homo sapiens, GI5802974, Length=163, Percent_Identity=31.9018404907975, Blast_Score=69, Evalue=2e-12, Organism=Homo sapiens, GI32189392, Length=160, Percent_Identity=32.5, Blast_Score=68, Evalue=3e-12, Organism=Homo sapiens, GI32483377, Length=151, Percent_Identity=33.112582781457, Blast_Score=68, Evalue=3e-12, Organism=Homo sapiens, GI4505591, Length=162, Percent_Identity=30.2469135802469, Blast_Score=67, Evalue=8e-12, Organism=Homo sapiens, GI32455266, Length=162, Percent_Identity=30.2469135802469, Blast_Score=67, Evalue=8e-12, Organism=Homo sapiens, GI32455264, Length=162, Percent_Identity=30.2469135802469, Blast_Score=67, Evalue=8e-12, Organism=Escherichia coli, GI1788825, Length=153, Percent_Identity=37.2549019607843, Blast_Score=108, Evalue=1e-25, Organism=Saccharomyces cerevisiae, GI6322180, Length=110, Percent_Identity=36.3636363636364, Blast_Score=80, Evalue=1e-16,
Paralogues:
None
Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA [H]
EC number: =1.11.1.15 [H]
Molecular weight: Translated: 16855; Mature: 16724
Theoretical pI: Translated: 7.71; Mature: 7.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTATAGKLAVGDQAPTFSLPNQTGQLVDLQSLLGHKKIVLFFYPKDHSAGCVAEVCAFR CCCCCCCCEEECCCCCCCCCCCCCCCEEEHHHHHCCCEEEEEEECCCCCCHHHHHHHHHH DQYEVFKQAGAEVIGISSDSVESHEKFAANNRLPFTLLSDRDGTVRKLYGATTLGILAGR HHHHHHHHCCCEEEECCCCCHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHH VTYIIDHHGTIQHIFSSLLNANKHISEALRIIKEA HEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHCC >Mature Secondary Structure TTATAGKLAVGDQAPTFSLPNQTGQLVDLQSLLGHKKIVLFFYPKDHSAGCVAEVCAFR CCCCCCCEEECCCCCCCCCCCCCCCEEEHHHHHCCCEEEEEEECCCCCCHHHHHHHHHH DQYEVFKQAGAEVIGISSDSVESHEKFAANNRLPFTLLSDRDGTVRKLYGATTLGILAGR HHHHHHHHCCCEEEECCCCCHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHH VTYIIDHHGTIQHIFSSLLNANKHISEALRIIKEA HEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12704232 [H]