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The map label for this gene is pheT [H]

Identifier: 159901145

GI number: 159901145

Start: 5919568

End: 5922084

Strand: Reverse

Name: pheT [H]

Synonym: Haur_4633

Alternate gene names: 159901145

Gene position: 5922084-5919568 (Counterclockwise)

Preceding gene: 159901149

Following gene: 159901143

Centisome position: 93.31

GC content: 53.87

Gene sequence:

>2517_bases
ATGCGAGTACCGCTTTCGTGGTTACGCGAATTTGTTGATATAACGATTAGCCCAGAAGAATTGGCCGAGCGTCTCACGCG
GGCGGGCTTGGAAGTTGCCAGCATCGATTATGTCGGGCTGCAAGCTCCTGCCGGCTCAGCGTGGGCACCAGATTTGAGCA
GCGCCACCCCACCAGATTATATTCCGTGGGATCGCGAGACGATTTTCGTGGGCCAGATCGTCGATGTGCAGCCGCACCCC
AACGCTGAACGCCTAAAATTACCACGCATTGCCTATGGCGAAGGCCGCGAATTGACCGTGGTGACCGGCGCACCGAATAT
CGAGCTTGGCATGAGCGGCCAAAAAGTGGTGCTAGCCACTAAAGGCGCTCGCCTGCTCGATGGTCATAGCGAAACCCGCC
AATGGTTGACGCTCAAACCAACCAAATTGCGCGGCGTACCGTCCGAGGGCATGGTTTGCTCAGAAATGGAGCTGGCGCTC
TCCGATGAACATGATGGCATTATCTTCTTGCCCGATGATGCGCCAGTTGGCACGCCCTTGGCCGATTATTGGGGCGATGC
CGTTTTAGAAATTGAAACGACTCCTAACTATGCCCATACCCTAAGCATTCTGGGGGTTGCGCGGGAAGTTGCGGCCTTAA
CTGGGGCCGAATTGCGCATGCCCAGTTTTGATTTGCCAACCAATGGCCCAGCCATCGCCGATAAAATTCAGGTTGAGATT
GTTGATTCAAACATTTGCCCACGCTTTGTCGCTGGCTTGATCGAAGGGGTGAAGATTGCCCCCTCGCCGTGGTGGATGCA
ACGGCGCTTACGCTTGGCAGGCCAGCGCCCAATTAACAACATTGCTGATATTACCAATTATGTAATGTTGGAACTGGGCG
AACCAAGCCATGCCTTCGATGCAGATCAGGTGGCCCAAGGGCGCTTGATTATTCGACCAGCCGCCGCAGGCGAAAAGCTC
GAAACGCTTGATCATGTTGTGCGCGAATTACGGCCAATCGATACAGTTGTGGCCGATCCCAATGGCCCTTCAAGTTTGGC
TGGGGTTATGGGTGGCGCAGCCTCGGAAATTAGCGATAGCACGGTCAATGTGTTATATGAAGCAGCCTTGTGGAATCCGA
TTGCGATTCGCCGCACGGCCCAACATTTCAAGCTTTTCTCCGAAGCTTCCAAACGCTTTGAGAAAGGCGTTGATCCAACG
CTGCCACCACGCACAACGATTCGCGGGTTGAACTTAATTCAACAATTAGCTGGCGGCACGATTGCCAATGGATTAGTTGA
TGTTTGCCCTGTGCCCTTCGCCCGCCGCGAAATTGAGCTAGCCTTGGGCGAAGTAAAACGCATTTTGGGGATCGATCTTG
AGCAAGCCGAAGTTGCCAATTTACTAAGTCGTTTGGGTTTTGAATGCGCGGTAGTTGAATCAAGCCGTGGCCCTGCCTTG
CATGTGCTAGTGCCAGCCCATCGCACCGATGTTGAAATCGAAGCCGATTTGCTCGAAGATGTGGCCCGTATGTATGGCTA
TGATCGCATCCCCGAAGCCTTGATGGCCGACACGCTGCCAACCCAACGTGCTAATCCGTTGTTCGAGGCCACCGAACGCT
TGCGCGATATGTTGGTAGCCGCAGGTTTGGATGAAGCAATCAGCTACTCGCTTAGCAACGACAGCTTGCAAAATTCGGTA
TATGTAAGCGAAAATGGGGCAAATGCTGAACAATTTGTGCGCTTGGAAAACCCATTAACTCCTGAGCGATCAGTGATGCG
CCGCTCTATCTTGCCCGAATTGTTGAGCATTGTGGTCGGCGATTTGCGCGAACGCGAACGGGTAGCCTTGTTTGAAATTG
GCGCGGTGTTCCACCCTGTGGCGGGCCAATTGCTACCCGACGAGCCACGCAACTTGGCACTTATTTTGGCTGGCACGCGC
CAACCAAGCACTTGGAGCCAACCAAGCCCCGAAGGCTTCGATTTCTTCGACCTCAAAGGCGTGATTGAAGAAGTGTTGCG
TCGCCACGGCTTGCGTGATCGCGCCAGCTTCCAAGTTGCCAGCGACGAGCGTTTGCACCCAGGCCGCAGCGCTAAAATCG
TGGTTGATGAAGTGGTGGTTGGGGTGTTTGGTGAGTTACATCCTTTGGTGCGCGATCGCTTTGGCTTTAGCGTGCCACGA
GTTTGTATCGCTGAACTAAGCGTTGATCAATTGCTCAAGGTCAGCCAACCAACCAAATATACCAGCATCTCGCGCTTCCC
CGCCACGGTACAAGATTTGGCCTTGGTTGCCAACGATGAGCTAGCCGCTGACCTGATTGCCAAAACCATCAAGCAGTATG
GTGGCGAATTCTTAGAAGATGTACGGCTGTTCGATGTCTACACTGGCTCGCCGATTCCAGCTGGTCAGCGCAGTTTGGCC
TTCCGCCTACGCTTCCGCGCCCCTGACCGCACCTTAGCCGACAAAGATTTGCTCAAAACCCGCGAAAAGTTGCTCAAGCA
GCTAGAACGCGAATTGGGCGTGCAAATTCGCAGCTAA

Upstream 100 bases:

>100_bases
AAGATTAAAGTCAAAAGCTGCCTTTTGATTTCTGCCTTTTGATTTTTGCCTTTATAATGCTGATTGGCTTAAACTACTAG
ATACGATGAGGTAAAACGGC

Downstream 100 bases:

>100_bases
CCTATTTTAGCGATGCAGGCATGCTGTACATTCGGCATGCCTGCATTTGCTATTTAAGCAATTTGCTGTTTTGCCAACTC
TAAGGCGGCGGCTAAATCGT

Product: phenylalanyl-tRNA synthetase subunit beta

Products: NA

Alternate protein names: Phenylalanine--tRNA ligase beta chain; PheRS [H]

Number of amino acids: Translated: 838; Mature: 838

Protein sequence:

>838_residues
MRVPLSWLREFVDITISPEELAERLTRAGLEVASIDYVGLQAPAGSAWAPDLSSATPPDYIPWDRETIFVGQIVDVQPHP
NAERLKLPRIAYGEGRELTVVTGAPNIELGMSGQKVVLATKGARLLDGHSETRQWLTLKPTKLRGVPSEGMVCSEMELAL
SDEHDGIIFLPDDAPVGTPLADYWGDAVLEIETTPNYAHTLSILGVAREVAALTGAELRMPSFDLPTNGPAIADKIQVEI
VDSNICPRFVAGLIEGVKIAPSPWWMQRRLRLAGQRPINNIADITNYVMLELGEPSHAFDADQVAQGRLIIRPAAAGEKL
ETLDHVVRELRPIDTVVADPNGPSSLAGVMGGAASEISDSTVNVLYEAALWNPIAIRRTAQHFKLFSEASKRFEKGVDPT
LPPRTTIRGLNLIQQLAGGTIANGLVDVCPVPFARREIELALGEVKRILGIDLEQAEVANLLSRLGFECAVVESSRGPAL
HVLVPAHRTDVEIEADLLEDVARMYGYDRIPEALMADTLPTQRANPLFEATERLRDMLVAAGLDEAISYSLSNDSLQNSV
YVSENGANAEQFVRLENPLTPERSVMRRSILPELLSIVVGDLRERERVALFEIGAVFHPVAGQLLPDEPRNLALILAGTR
QPSTWSQPSPEGFDFFDLKGVIEEVLRRHGLRDRASFQVASDERLHPGRSAKIVVDEVVVGVFGELHPLVRDRFGFSVPR
VCIAELSVDQLLKVSQPTKYTSISRFPATVQDLALVANDELAADLIAKTIKQYGGEFLEDVRLFDVYTGSPIPAGQRSLA
FRLRFRAPDRTLADKDLLKTREKLLKQLERELGVQIRS

Sequences:

>Translated_838_residues
MRVPLSWLREFVDITISPEELAERLTRAGLEVASIDYVGLQAPAGSAWAPDLSSATPPDYIPWDRETIFVGQIVDVQPHP
NAERLKLPRIAYGEGRELTVVTGAPNIELGMSGQKVVLATKGARLLDGHSETRQWLTLKPTKLRGVPSEGMVCSEMELAL
SDEHDGIIFLPDDAPVGTPLADYWGDAVLEIETTPNYAHTLSILGVAREVAALTGAELRMPSFDLPTNGPAIADKIQVEI
VDSNICPRFVAGLIEGVKIAPSPWWMQRRLRLAGQRPINNIADITNYVMLELGEPSHAFDADQVAQGRLIIRPAAAGEKL
ETLDHVVRELRPIDTVVADPNGPSSLAGVMGGAASEISDSTVNVLYEAALWNPIAIRRTAQHFKLFSEASKRFEKGVDPT
LPPRTTIRGLNLIQQLAGGTIANGLVDVCPVPFARREIELALGEVKRILGIDLEQAEVANLLSRLGFECAVVESSRGPAL
HVLVPAHRTDVEIEADLLEDVARMYGYDRIPEALMADTLPTQRANPLFEATERLRDMLVAAGLDEAISYSLSNDSLQNSV
YVSENGANAEQFVRLENPLTPERSVMRRSILPELLSIVVGDLRERERVALFEIGAVFHPVAGQLLPDEPRNLALILAGTR
QPSTWSQPSPEGFDFFDLKGVIEEVLRRHGLRDRASFQVASDERLHPGRSAKIVVDEVVVGVFGELHPLVRDRFGFSVPR
VCIAELSVDQLLKVSQPTKYTSISRFPATVQDLALVANDELAADLIAKTIKQYGGEFLEDVRLFDVYTGSPIPAGQRSLA
FRLRFRAPDRTLADKDLLKTREKLLKQLERELGVQIRS
>Mature_838_residues
MRVPLSWLREFVDITISPEELAERLTRAGLEVASIDYVGLQAPAGSAWAPDLSSATPPDYIPWDRETIFVGQIVDVQPHP
NAERLKLPRIAYGEGRELTVVTGAPNIELGMSGQKVVLATKGARLLDGHSETRQWLTLKPTKLRGVPSEGMVCSEMELAL
SDEHDGIIFLPDDAPVGTPLADYWGDAVLEIETTPNYAHTLSILGVAREVAALTGAELRMPSFDLPTNGPAIADKIQVEI
VDSNICPRFVAGLIEGVKIAPSPWWMQRRLRLAGQRPINNIADITNYVMLELGEPSHAFDADQVAQGRLIIRPAAAGEKL
ETLDHVVRELRPIDTVVADPNGPSSLAGVMGGAASEISDSTVNVLYEAALWNPIAIRRTAQHFKLFSEASKRFEKGVDPT
LPPRTTIRGLNLIQQLAGGTIANGLVDVCPVPFARREIELALGEVKRILGIDLEQAEVANLLSRLGFECAVVESSRGPAL
HVLVPAHRTDVEIEADLLEDVARMYGYDRIPEALMADTLPTQRANPLFEATERLRDMLVAAGLDEAISYSLSNDSLQNSV
YVSENGANAEQFVRLENPLTPERSVMRRSILPELLSIVVGDLRERERVALFEIGAVFHPVAGQLLPDEPRNLALILAGTR
QPSTWSQPSPEGFDFFDLKGVIEEVLRRHGLRDRASFQVASDERLHPGRSAKIVVDEVVVGVFGELHPLVRDRFGFSVPR
VCIAELSVDQLLKVSQPTKYTSISRFPATVQDLALVANDELAADLIAKTIKQYGGEFLEDVRLFDVYTGSPIPAGQRSLA
FRLRFRAPDRTLADKDLLKTREKLLKQLERELGVQIRS

Specific function: Unknown

COG id: COG0072

COG function: function code J; Phenylalanyl-tRNA synthetase beta subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 tRNA-binding domain [H]

Homologues:

Organism=Homo sapiens, GI124028525, Length=403, Percent_Identity=23.8213399503722, Blast_Score=82, Evalue=3e-15,
Organism=Escherichia coli, GI1788006, Length=847, Percent_Identity=34.4746162927981, Blast_Score=409, Evalue=1e-115,
Organism=Caenorhabditis elegans, GI17533403, Length=412, Percent_Identity=26.6990291262136, Blast_Score=92, Evalue=1e-18,
Organism=Saccharomyces cerevisiae, GI6323089, Length=312, Percent_Identity=25.3205128205128, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI21355211, Length=404, Percent_Identity=26.980198019802, Blast_Score=100, Evalue=5e-21,

Paralogues:

None

Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005146
- InterPro:   IPR005147
- InterPro:   IPR009061
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR004532
- InterPro:   IPR020825
- InterPro:   IPR005121
- InterPro:   IPR002547 [H]

Pfam domain/function: PF03483 B3_4; PF03484 B5; PF03147 FDX-ACB; PF01588 tRNA_bind [H]

EC number: =6.1.1.20 [H]

Molecular weight: Translated: 92055; Mature: 92055

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: PS50886 TRBD ; PS00572 GLYCOSYL_HYDROL_F1_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVPLSWLREFVDITISPEELAERLTRAGLEVASIDYVGLQAPAGSAWAPDLSSATPPDY
CCCCHHHHHHHHCEECCHHHHHHHHHHCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCC
IPWDRETIFVGQIVDVQPHPNAERLKLPRIAYGEGRELTVVTGAPNIELGMSGQKVVLAT
CCCCCCEEEEEEEEECCCCCCHHHEECCCEECCCCCEEEEEECCCCEEECCCCCEEEEEE
KGARLLDGHSETRQWLTLKPTKLRGVPSEGMVCSEMELALSDEHDGIIFLPDDAPVGTPL
CCCHHHCCCHHHCCEEEECCHHCCCCCCCCCEECCHHHEECCCCCCEEEECCCCCCCCCH
ADYWGDAVLEIETTPNYAHTLSILGVAREVAALTGAELRMPSFDLPTNGPAIADKIQVEI
HHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCEEEEEE
VDSNICPRFVAGLIEGVKIAPSPWWMQRRLRLAGQRPINNIADITNYVMLELGEPSHAFD
ECCCCCHHHHHHHHCCCEECCCHHHHHHHHHHHCCCCCHHHHHHHHEEEEEECCCCCCCC
ADQVAQGRLIIRPAAAGEKLETLDHVVRELRPIDTVVADPNGPSSLAGVMGGAASEISDS
HHHHHCCEEEEEECCCCCHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHCCCHHHCCCH
TVNVLYEAALWNPIAIRRTAQHFKLFSEASKRFEKGVDPTLPPRTTIRGLNLIQQLAGGT
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCH
IANGLVDVCPVPFARREIELALGEVKRILGIDLEQAEVANLLSRLGFECAVVESSRGPAL
HHCCHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEEECCCCCEE
HVLVPAHRTDVEIEADLLEDVARMYGYDRIPEALMADTLPTQRANPLFEATERLRDMLVA
EEEECCCCCCCEEHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
AGLDEAISYSLSNDSLQNSVYVSENGANAEQFVRLENPLTPERSVMRRSILPELLSIVVG
HCCHHHHEECCCCCCCCCCEEEECCCCCHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHH
DLRERERVALFEIGAVFHPVAGQLLPDEPRNLALILAGTRQPSTWSQPSPEGFDFFDLKG
HHHHHHHEEHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHH
VIEEVLRRHGLRDRASFQVASDERLHPGRSAKIVVDEVVVGVFGELHPLVRDRFGFSVPR
HHHHHHHHCCCCCCCCEEECCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCHH
VCIAELSVDQLLKVSQPTKYTSISRFPATVQDLALVANDELAADLIAKTIKQYGGEFLED
HHHHHCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHH
VRLFDVYTGSPIPAGQRSLAFRLRFRAPDRTLADKDLLKTREKLLKQLERELGVQIRS
CEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCEECC
>Mature Secondary Structure
MRVPLSWLREFVDITISPEELAERLTRAGLEVASIDYVGLQAPAGSAWAPDLSSATPPDY
CCCCHHHHHHHHCEECCHHHHHHHHHHCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCC
IPWDRETIFVGQIVDVQPHPNAERLKLPRIAYGEGRELTVVTGAPNIELGMSGQKVVLAT
CCCCCCEEEEEEEEECCCCCCHHHEECCCEECCCCCEEEEEECCCCEEECCCCCEEEEEE
KGARLLDGHSETRQWLTLKPTKLRGVPSEGMVCSEMELALSDEHDGIIFLPDDAPVGTPL
CCCHHHCCCHHHCCEEEECCHHCCCCCCCCCEECCHHHEECCCCCCEEEECCCCCCCCCH
ADYWGDAVLEIETTPNYAHTLSILGVAREVAALTGAELRMPSFDLPTNGPAIADKIQVEI
HHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCEEEEEE
VDSNICPRFVAGLIEGVKIAPSPWWMQRRLRLAGQRPINNIADITNYVMLELGEPSHAFD
ECCCCCHHHHHHHHCCCEECCCHHHHHHHHHHHCCCCCHHHHHHHHEEEEEECCCCCCCC
ADQVAQGRLIIRPAAAGEKLETLDHVVRELRPIDTVVADPNGPSSLAGVMGGAASEISDS
HHHHHCCEEEEEECCCCCHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHCCCHHHCCCH
TVNVLYEAALWNPIAIRRTAQHFKLFSEASKRFEKGVDPTLPPRTTIRGLNLIQQLAGGT
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCH
IANGLVDVCPVPFARREIELALGEVKRILGIDLEQAEVANLLSRLGFECAVVESSRGPAL
HHCCHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEEECCCCCEE
HVLVPAHRTDVEIEADLLEDVARMYGYDRIPEALMADTLPTQRANPLFEATERLRDMLVA
EEEECCCCCCCEEHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
AGLDEAISYSLSNDSLQNSVYVSENGANAEQFVRLENPLTPERSVMRRSILPELLSIVVG
HCCHHHHEECCCCCCCCCCEEEECCCCCHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHH
DLRERERVALFEIGAVFHPVAGQLLPDEPRNLALILAGTRQPSTWSQPSPEGFDFFDLKG
HHHHHHHEEHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHH
VIEEVLRRHGLRDRASFQVASDERLHPGRSAKIVVDEVVVGVFGELHPLVRDRFGFSVPR
HHHHHHHHCCCCCCCCEEECCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCHH
VCIAELSVDQLLKVSQPTKYTSISRFPATVQDLALVANDELAADLIAKTIKQYGGEFLED
HHHHHCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHH
VRLFDVYTGSPIPAGQRSLAFRLRFRAPDRTLADKDLLKTREKLLKQLERELGVQIRS
CEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA