| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159901136
Identifier: 159901136
GI number: 159901136
Start: 5909142
End: 5909720
Strand: Direct
Name: 159901136
Synonym: Haur_4624
Alternate gene names: NA
Gene position: 5909142-5909720 (Clockwise)
Preceding gene: 159901135
Following gene: 159901139
Centisome position: 93.11
GC content: 50.43
Gene sequence:
>579_bases ATGCCTGATGGTAAAACTCATGATATGTTGACAGTCTTTACGGGCATTGTGGGCATTCCGATTATTTGGCGGATTGTGCC AAATAGCGATTTATTAGGGGCATTTGTTTGGGCCGGAAGCCATATTGTTTCGGGCATGGCCTTTTCGCCCGATTTGGATT TGGCTTCCGAACCCTATAACCGTTGGGGGCCGTTGCGATTTATTTGGTGGCCCTATCGTGAGCTTGTGCCGCATCGTGCT GGAATTTCGCATAGCCTCGTATTTGGCCCATTATTTCGGCTTGGCTACTTTTTGGTGATGGTCTGGCTCTCGTTTTATTT GGGCATGACCTTAATCAATAGCTTCACGCCGGTTGATACTGCCACGATTAGCGCCGCCTTTATTGCCGATCTCAAGGCAC TGTGGTATAGCGATCGCCAACTCATCGTTTATGCATTAGTCGGTTTTGTTACTGGCGGAGCCGTGCATTCGATTGCCGAT TGGCTGATCGAAGGCCGCGAGCCGTATCATAAATCGCTGTTGATGCCATGGCGCAAACGTCGCCGCAAGCGCCGCCGTGA TGACGATTGGGGTTGGTAA
Upstream 100 bases:
>100_bases ACCAGCCAAAAAACCAGCCTAAACCCTTGCATTCCAACCAGCAATCAAAGATAATAGCACATCTGAACTAGCGGTTGGCA CGTTGTAGGAGCGTTGAACA
Downstream 100 bases:
>100_bases TTTAGCCCAACCATGTGCCAACTTGGCCATCACCACGACTACCTAGCAAGAGTTCGGGTGGAACTGGGCGTTGCTGCCAA AAGCGATTCCAATTGGCTAT
Product: metal-binding protein-like protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 192; Mature: 191
Protein sequence:
>192_residues MPDGKTHDMLTVFTGIVGIPIIWRIVPNSDLLGAFVWAGSHIVSGMAFSPDLDLASEPYNRWGPLRFIWWPYRELVPHRA GISHSLVFGPLFRLGYFLVMVWLSFYLGMTLINSFTPVDTATISAAFIADLKALWYSDRQLIVYALVGFVTGGAVHSIAD WLIEGREPYHKSLLMPWRKRRRKRRRDDDWGW
Sequences:
>Translated_192_residues MPDGKTHDMLTVFTGIVGIPIIWRIVPNSDLLGAFVWAGSHIVSGMAFSPDLDLASEPYNRWGPLRFIWWPYRELVPHRA GISHSLVFGPLFRLGYFLVMVWLSFYLGMTLINSFTPVDTATISAAFIADLKALWYSDRQLIVYALVGFVTGGAVHSIAD WLIEGREPYHKSLLMPWRKRRRKRRRDDDWGW >Mature_191_residues PDGKTHDMLTVFTGIVGIPIIWRIVPNSDLLGAFVWAGSHIVSGMAFSPDLDLASEPYNRWGPLRFIWWPYRELVPHRAG ISHSLVFGPLFRLGYFLVMVWLSFYLGMTLINSFTPVDTATISAAFIADLKALWYSDRQLIVYALVGFVTGGAVHSIADW LIEGREPYHKSLLMPWRKRRRKRRRDDDWGW
Specific function: Unknown
COG id: COG2389
COG function: function code R; Uncharacterized metal-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22081; Mature: 21950
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDGKTHDMLTVFTGIVGIPIIWRIVPNSDLLGAFVWAGSHIVSGMAFSPDLDLASEPYN CCCCCHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC RWGPLRFIWWPYRELVPHRAGISHSLVFGPLFRLGYFLVMVWLSFYLGMTLINSFTPVDT CCCCEEEEECCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH ATISAAFIADLKALWYSDRQLIVYALVGFVTGGAVHSIADWLIEGREPYHKSLLMPWRKR HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHH RRKRRRDDDWGW HHHHCCCCCCCC >Mature Secondary Structure PDGKTHDMLTVFTGIVGIPIIWRIVPNSDLLGAFVWAGSHIVSGMAFSPDLDLASEPYN CCCCHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC RWGPLRFIWWPYRELVPHRAGISHSLVFGPLFRLGYFLVMVWLSFYLGMTLINSFTPVDT CCCCEEEEECCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH ATISAAFIADLKALWYSDRQLIVYALVGFVTGGAVHSIADWLIEGREPYHKSLLMPWRKR HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHH RRKRRRDDDWGW HHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA