Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159901128

Identifier: 159901128

GI number: 159901128

Start: 5902412

End: 5902774

Strand: Direct

Name: 159901128

Synonym: Haur_4616

Alternate gene names: NA

Gene position: 5902412-5902774 (Clockwise)

Preceding gene: 159901127

Following gene: 159901135

Centisome position: 93.0

GC content: 47.66

Gene sequence:

>363_bases
GTGTCGCAACACGCTATTCGTAATCTAACGCGCAATAGCAGCTTGGTTGAATACGCTGAGTTTGCTAATAGCTTTTTGAG
CCGTGGTATGGGCCTGATGGGGCGCAAGCACTTGCCTGCCAATACAGGCTTAATTCTCTATCCCAATAATAATATTCATA
TGTTCTTTATGCGCTTTGCGATTGATGTGATCTTTGTTGATCGACAGCATCAGGTGGTGGGGCTGCGCGAGAACTTTAAG
CCCTGGCGGCCATTTGCTGGCGCAGCCAAGGCCCGTTATACCCTCGAATTGCCAGTTGGGGTTATTCAACAATCCCAAAC
CCAACTCGGCGATCAATTAGCAGTTGTTCCTGCTATTTTCTAA

Upstream 100 bases:

>100_bases
CAATTAAGATGCTCTTTCCATTGGTGTTCTTGATCTTCCCTTCGATGTTCGTGGTTATCTTGGGGCCAGCTATTCCACGT
TTGCTTGGTGGTGGTCTCTA

Downstream 100 bases:

>100_bases
GGTATAGCCCTAGCAAAACCCCAAGCTTGCTAGGGCTATTCAATCAACATTTCAACTCCATAGACTTTGCGAAATAGATT
GGTTTTGCGATTCGCATCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 119

Protein sequence:

>120_residues
MSQHAIRNLTRNSSLVEYAEFANSFLSRGMGLMGRKHLPANTGLILYPNNNIHMFFMRFAIDVIFVDRQHQVVGLRENFK
PWRPFAGAAKARYTLELPVGVIQQSQTQLGDQLAVVPAIF

Sequences:

>Translated_120_residues
MSQHAIRNLTRNSSLVEYAEFANSFLSRGMGLMGRKHLPANTGLILYPNNNIHMFFMRFAIDVIFVDRQHQVVGLRENFK
PWRPFAGAAKARYTLELPVGVIQQSQTQLGDQLAVVPAIF
>Mature_119_residues
SQHAIRNLTRNSSLVEYAEFANSFLSRGMGLMGRKHLPANTGLILYPNNNIHMFFMRFAIDVIFVDRQHQVVGLRENFKP
WRPFAGAAKARYTLELPVGVIQQSQTQLGDQLAVVPAIF

Specific function: Unknown

COG id: COG1430

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0127 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003795
- InterPro:   IPR022906 [H]

Pfam domain/function: PF02643 DUF192 [H]

EC number: NA

Molecular weight: Translated: 13603; Mature: 13472

Theoretical pI: Translated: 10.75; Mature: 10.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQHAIRNLTRNSSLVEYAEFANSFLSRGMGLMGRKHLPANTGLILYPNNNIHMFFMRFA
CCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCEEEEEHHHH
IDVIFVDRQHQVVGLRENFKPWRPFAGAAKARYTLELPVGVIQQSQTQLGDQLAVVPAIF
EEEEEECCCCEEEEECCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHCCCEEEEECCC
>Mature Secondary Structure 
SQHAIRNLTRNSSLVEYAEFANSFLSRGMGLMGRKHLPANTGLILYPNNNIHMFFMRFA
CCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCEEEEEHHHH
IDVIFVDRQHQVVGLRENFKPWRPFAGAAKARYTLELPVGVIQQSQTQLGDQLAVVPAIF
EEEEEECCCCEEEEECCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]