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The map label for this gene is smf [H]

Identifier: 159901058

GI number: 159901058

Start: 5816525

End: 5817634

Strand: Reverse

Name: smf [H]

Synonym: Haur_4546

Alternate gene names: 159901058

Gene position: 5817634-5816525 (Counterclockwise)

Preceding gene: 159901060

Following gene: 159901057

Centisome position: 91.67

GC content: 54.59

Gene sequence:

>1110_bases
ATGGATGAACGTCATGCCTACATTGCCTTTAATCTCACTCCTGGTATAGGACCACAGCGCCTCCAAGCCCTGATTAAGCA
TTGTGGCTCGGCGGCGGCAGCTTGGTCGGCTACGCTCGACGATTGGCGGGCGGCGGGTTTGGATCGTCGCAGCATTCAAG
CCTTGCAGCATGCGCAACAACATTTAGACCTTGAGGCCGAGCTGCGCACAATTGCTGAACAAAACATCAAGGTTGTGCTG
CAAACTGATTCGGACTTTCCAGCCATGCTGCACACAATTGATCCTGTGCCGCCGTTGCTGTATTTGCGTGGTTCACTGAT
TGAAACTGATCGTTGGGCGGTAGCAATTGTCGGTACGCGCAACCCTACCCCCTATGGTCGTGAGGTCACCTATAAGTTTG
CTGGCGAGTTAGCCCGCGCAGGGTTGACGGTGGTTTCTGGTTTGGCCTTGGGCATCGATGCAATCGCCCATCGCACCGCC
TTAGATAATAATGGGCGCACCTTGGCGGTGCTTGGCAGCGGGCTGCAACAGATTTACCCTTCCCAACATCGCCAATTAGC
GGCTGATGTGAGCCAACAGGGAGCCTTGCTTTCGGAGTATGCCCCGACGACCGAGCCATTGAGTGGCAACTTCCCCGCGC
GTAATCGCTTGATTAGCGGGCTAAGTTTGGCAACAATTGTAGTTGAAGCAGGCGAACGTAGCGGCGCATTAATTACTGCC
CGCTTTGCGCTCGAACAAGGTCGTGATGTGTTTGCCGTGCCTGGCTCAATTCTCAGTCATAGCAGCGATGGACCAAATCA
ATTAATCGTCGATGGTGCAACACCCTTGCGTTCAGTCGAGCAATTGCTGGAGCAGCTGAATCTGCATCAAGCGCAAGCCC
AACAAACGGTCAGTACGATTGTGCCCGAAACACCCGCTGAGGCCTTGCTCTTGCCCCATTTGAGTGGTCAGCCCACCCAC
ATCGACGAATTAGGGCGCTCGTGTGGGCTAGCGGCCCATGATCTGGCGGCAACCTTGGGCTTGATGGAACTCAAAGGCAT
GGTTCGCCATGTTGGTGGAATGCATTATGTGCTTGCTCGCGAAACGCCTGCACCCTATGATCTCTCATAA

Upstream 100 bases:

>100_bases
GAAGCACATAGCTTTTGATACCGCCCGCAATTCCTATTTGCTTTTGCTACCTACTTGACTGATGTATAATTAAAGCGTTA
CACATGTGTGGGAGTCTGCA

Downstream 100 bases:

>100_bases
CCTAGTAAGGAAATTTTTGTATGGCTTGGGAAAATGATGTTTTACGCTCGCTGAACGAGCAAGGTTGTCGCATGACTGGC
CCACGGCGCTTGATTGTTCG

Product: DNA protecting protein DprA

Products: NA

Alternate protein names: DNA-processing chain A [H]

Number of amino acids: Translated: 369; Mature: 369

Protein sequence:

>369_residues
MDERHAYIAFNLTPGIGPQRLQALIKHCGSAAAAWSATLDDWRAAGLDRRSIQALQHAQQHLDLEAELRTIAEQNIKVVL
QTDSDFPAMLHTIDPVPPLLYLRGSLIETDRWAVAIVGTRNPTPYGREVTYKFAGELARAGLTVVSGLALGIDAIAHRTA
LDNNGRTLAVLGSGLQQIYPSQHRQLAADVSQQGALLSEYAPTTEPLSGNFPARNRLISGLSLATIVVEAGERSGALITA
RFALEQGRDVFAVPGSILSHSSDGPNQLIVDGATPLRSVEQLLEQLNLHQAQAQQTVSTIVPETPAEALLLPHLSGQPTH
IDELGRSCGLAAHDLAATLGLMELKGMVRHVGGMHYVLARETPAPYDLS

Sequences:

>Translated_369_residues
MDERHAYIAFNLTPGIGPQRLQALIKHCGSAAAAWSATLDDWRAAGLDRRSIQALQHAQQHLDLEAELRTIAEQNIKVVL
QTDSDFPAMLHTIDPVPPLLYLRGSLIETDRWAVAIVGTRNPTPYGREVTYKFAGELARAGLTVVSGLALGIDAIAHRTA
LDNNGRTLAVLGSGLQQIYPSQHRQLAADVSQQGALLSEYAPTTEPLSGNFPARNRLISGLSLATIVVEAGERSGALITA
RFALEQGRDVFAVPGSILSHSSDGPNQLIVDGATPLRSVEQLLEQLNLHQAQAQQTVSTIVPETPAEALLLPHLSGQPTH
IDELGRSCGLAAHDLAATLGLMELKGMVRHVGGMHYVLARETPAPYDLS
>Mature_369_residues
MDERHAYIAFNLTPGIGPQRLQALIKHCGSAAAAWSATLDDWRAAGLDRRSIQALQHAQQHLDLEAELRTIAEQNIKVVL
QTDSDFPAMLHTIDPVPPLLYLRGSLIETDRWAVAIVGTRNPTPYGREVTYKFAGELARAGLTVVSGLALGIDAIAHRTA
LDNNGRTLAVLGSGLQQIYPSQHRQLAADVSQQGALLSEYAPTTEPLSGNFPARNRLISGLSLATIVVEAGERSGALITA
RFALEQGRDVFAVPGSILSHSSDGPNQLIVDGATPLRSVEQLLEQLNLHQAQAQQTVSTIVPETPAEALLLPHLSGQPTH
IDELGRSCGLAAHDLAATLGLMELKGMVRHVGGMHYVLARETPAPYDLS

Specific function: Essential for efficient chromosomal DNA transformation but not required for plasmid transformation [H]

COG id: COG0758

COG function: function code LU; Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smf family [H]

Homologues:

Organism=Escherichia coli, GI48994932, Length=320, Percent_Identity=39.375, Blast_Score=180, Evalue=1e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003488 [H]

Pfam domain/function: PF02481 DNA_processg_A [H]

EC number: NA

Molecular weight: Translated: 39574; Mature: 39574

Theoretical pI: Translated: 6.14; Mature: 6.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDERHAYIAFNLTPGIGPQRLQALIKHCGSAAAAWSATLDDWRAAGLDRRSIQALQHAQQ
CCCCEEEEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
HLDLEAELRTIAEQNIKVVLQTDSDFPAMLHTIDPVPPLLYLRGSLIETDRWAVAIVGTR
HCCHHHHHHHHHHCCEEEEEEECCCCCHHHHHCCCCCHHHHHCCCEEECCCEEEEEEECC
NPTPYGREVTYKFAGELARAGLTVVSGLALGIDAIAHRTALDNNGRTLAVLGSGLQQIYP
CCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHCC
SQHRQLAADVSQQGALLSEYAPTTEPLSGNFPARNRLISGLSLATIVVEAGERSGALITA
HHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCHHHHHHHCCCEEEEEEECCCCCCCEEEE
RFALEQGRDVFAVPGSILSHSSDGPNQLIVDGATPLRSVEQLLEQLNLHQAQAQQTVSTI
EEHHHCCCEEEECCCHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VPETPAEALLLPHLSGQPTHIDELGRSCGLAAHDLAATLGLMELKGMVRHVGGMHYVLAR
CCCCCHHHEEECCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEE
ETPAPYDLS
CCCCCCCCC
>Mature Secondary Structure
MDERHAYIAFNLTPGIGPQRLQALIKHCGSAAAAWSATLDDWRAAGLDRRSIQALQHAQQ
CCCCEEEEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
HLDLEAELRTIAEQNIKVVLQTDSDFPAMLHTIDPVPPLLYLRGSLIETDRWAVAIVGTR
HCCHHHHHHHHHHCCEEEEEEECCCCCHHHHHCCCCCHHHHHCCCEEECCCEEEEEEECC
NPTPYGREVTYKFAGELARAGLTVVSGLALGIDAIAHRTALDNNGRTLAVLGSGLQQIYP
CCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHCC
SQHRQLAADVSQQGALLSEYAPTTEPLSGNFPARNRLISGLSLATIVVEAGERSGALITA
HHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCHHHHHHHCCCEEEEEEECCCCCCCEEEE
RFALEQGRDVFAVPGSILSHSSDGPNQLIVDGATPLRSVEQLLEQLNLHQAQAQQTVSTI
EEHHHCCCEEEECCCHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VPETPAEALLLPHLSGQPTHIDELGRSCGLAAHDLAATLGLMELKGMVRHVGGMHYVLAR
CCCCCHHHEEECCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEE
ETPAPYDLS
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7768823; 7542800 [H]