| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is fur [H]
Identifier: 159901057
GI number: 159901057
Start: 5816061
End: 5816504
Strand: Reverse
Name: fur [H]
Synonym: Haur_4545
Alternate gene names: 159901057
Gene position: 5816504-5816061 (Counterclockwise)
Preceding gene: 159901058
Following gene: 159901056
Centisome position: 91.65
GC content: 52.03
Gene sequence:
>444_bases ATGGCTTGGGAAAATGATGTTTTACGCTCGCTGAACGAGCAAGGTTGTCGCATGACTGGCCCACGGCGCTTGATTGTTCG CACGATTGCCAGCCGCCGCGAAGCATTTACCGCTGAACAACTTGTGGTCGAATTGCCCGATGTTGGTCGCGCCACGATTT ATCGCACCTTGGATATGCTGGCGGCTAGCCATTGGTTGGCTCGGATTCACCACGATGAAGGTGATCATGCCTATTTGCCA GCCCACCCCCATCAACATCAATTAGTTTGTACCCGTTGTGGCACTGCGGTTGCTTTTAATACCTGCGATCTCGATGGCAT TTTGAATCAGCTTGGGAAATCGACTGGCTTTGTGATTCAAGGTCATGCCCTCGAAGCCTTTGGCCTGTGTGGTCAATGTC AACATAATCGCCCTGAACTGCGGCTAAACCCACGGCTAGGCTAA
Upstream 100 bases:
>100_bases TCAAAGGCATGGTTCGCCATGTTGGTGGAATGCATTATGTGCTTGCTCGCGAAACGCCTGCACCCTATGATCTCTCATAA CCTAGTAAGGAAATTTTTGT
Downstream 100 bases:
>100_bases GTGTTTCGGGTCGATGGAAGGTAGCGCATATGCCCAAAGAATTAACCGTGCGAGTGAGTGCCCGCACCGTCGGCTGGACA CTGCTGATTTTTTCAGGGGT
Product: ferric uptake regulator family protein
Products: NA
Alternate protein names: Ferric uptake regulator [H]
Number of amino acids: Translated: 147; Mature: 146
Protein sequence:
>147_residues MAWENDVLRSLNEQGCRMTGPRRLIVRTIASRREAFTAEQLVVELPDVGRATIYRTLDMLAASHWLARIHHDEGDHAYLP AHPHQHQLVCTRCGTAVAFNTCDLDGILNQLGKSTGFVIQGHALEAFGLCGQCQHNRPELRLNPRLG
Sequences:
>Translated_147_residues MAWENDVLRSLNEQGCRMTGPRRLIVRTIASRREAFTAEQLVVELPDVGRATIYRTLDMLAASHWLARIHHDEGDHAYLP AHPHQHQLVCTRCGTAVAFNTCDLDGILNQLGKSTGFVIQGHALEAFGLCGQCQHNRPELRLNPRLG >Mature_146_residues AWENDVLRSLNEQGCRMTGPRRLIVRTIASRREAFTAEQLVVELPDVGRATIYRTLDMLAASHWLARIHHDEGDHAYLPA HPHQHQLVCTRCGTAVAFNTCDLDGILNQLGKSTGFVIQGHALEAFGLCGQCQHNRPELRLNPRLG
Specific function: Acts as a global negative controlling element, employing Fe(2+) as a cofactor to bind the operator of the repressed genes [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
None
Paralogues:
None
Copy number: 3432 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 16445; Mature: 16314
Theoretical pI: Translated: 7.57; Mature: 7.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.1 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 4.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAWENDVLRSLNEQGCRMTGPRRLIVRTIASRREAFTAEQLVVELPDVGRATIYRTLDML CCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHH AASHWLARIHHDEGDHAYLPAHPHQHQLVCTRCGTAVAFNTCDLDGILNQLGKSTGFVIQ HHHHHHHHHHCCCCCEEECCCCCCCCCEEEECCCCEEEECCCCHHHHHHHHCCCCCEEEE GHALEAFGLCGQCQHNRPELRLNPRLG CCCHHHHCCCCCCCCCCCCEEECCCCC >Mature Secondary Structure AWENDVLRSLNEQGCRMTGPRRLIVRTIASRREAFTAEQLVVELPDVGRATIYRTLDML CCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHH AASHWLARIHHDEGDHAYLPAHPHQHQLVCTRCGTAVAFNTCDLDGILNQLGKSTGFVIQ HHHHHHHHHHCCCCCEEECCCCCCCCCEEEECCCCEEEECCCCHHHHHHHHCCCCCEEEE GHALEAFGLCGQCQHNRPELRLNPRLG CCCHHHHCCCCCCCCCCCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8083178 [H]