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The map label for this gene is trpH [H]

Identifier: 159901054

GI number: 159901054

Start: 5812746

End: 5813585

Strand: Reverse

Name: trpH [H]

Synonym: Haur_4542

Alternate gene names: 159901054

Gene position: 5813585-5812746 (Counterclockwise)

Preceding gene: 159901055

Following gene: 159901053

Centisome position: 91.6

GC content: 55.12

Gene sequence:

>840_bases
ATGTTGCTCGATTTACATTGTCACACAATTGCGACACCCCATCATTCGCATTGGACACCCACCGAATTAATGGCAGCGGC
TCAAGCGGCTGGCATTCAGGTTATTGGCATCGCCGACCACAACACGACCAGCCAAGTGACGGCCTTTGCTGAGGCTGCCC
AAGCAGCAGGCTTGGATTTTATCGGCGGAGTTGAATTTGATAGCGCCTTCAATGGCAAGCTTTGGCATACCTTGGTCTAC
GGCGCAAACCCTAACGATCCTGGCATTTTGGGTTTGTGCGAGGCCGTGGTTCGGCGCAACCATGCCGATGCTCAACGCCT
GCTGGAGCAAACGCGCAGTGCAGGCCACGATCTCCCAAGCCTAGCCCAGATTGCCGTTGATCGGCCTGCCAATTTGGCCG
ATGTGGCTCATGGCTTGGTGCGCGATGGCATCTGGCCCAGCCAAACCGGCGTTGATCCTGAATCGGCGGGCATGGCTTAT
TTACTAACCAACCAGCCTGAGGCCTATAATCCCTTGAGCGTGGACGAGATTGTGCAAGTCGCTCATGCTGCTGGCGGAGT
GGCAATTTTAGCCCATCCTGGTCGTGAAAAAAGTGTTTATGCCATTCCAGCGACTGCCGCTGATTTTGTGGCATTGGCGG
CGATTGGGCTTGATGGCATCGAGGTTTATTATCCGATGCACAGCTCTGAGCAAGTGGCATTTTTCGTGCAGCAGGCGGCG
CTGCATGGCTTTTTGATCAGCGCTGGCGGCGATTCGCATGGCCCGCGTGATCCTTTCAGCCCACAGCCAGCCGCACGTTG
TCGCGATCTTTTGGCTCGTTTTGGAATTGATGTGTTATGA

Upstream 100 bases:

>100_bases
AATCCCCCAGTTAATCAACCCTAAATTGTGGTACCATTTTGGCAACGCCATCGCAGGGCTAAGAGCTAGTGCTCTTGGCC
CTTTGTGTTGGGAGGCTTAA

Downstream 100 bases:

>100_bases
GCGTGATTGTCTGTTTTATTGATGGGGTTGGTTTGTTGCCGCACGCCGCCGCGCCCTGGACGACCGCCCATCTGCCAACA
CTCACCAACTTGCTGGGCGA

Product: phosphotransferase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MLLDLHCHTIATPHHSHWTPTELMAAAQAAGIQVIGIADHNTTSQVTAFAEAAQAAGLDFIGGVEFDSAFNGKLWHTLVY
GANPNDPGILGLCEAVVRRNHADAQRLLEQTRSAGHDLPSLAQIAVDRPANLADVAHGLVRDGIWPSQTGVDPESAGMAY
LLTNQPEAYNPLSVDEIVQVAHAAGGVAILAHPGREKSVYAIPATAADFVALAAIGLDGIEVYYPMHSSEQVAFFVQQAA
LHGFLISAGGDSHGPRDPFSPQPAARCRDLLARFGIDVL

Sequences:

>Translated_279_residues
MLLDLHCHTIATPHHSHWTPTELMAAAQAAGIQVIGIADHNTTSQVTAFAEAAQAAGLDFIGGVEFDSAFNGKLWHTLVY
GANPNDPGILGLCEAVVRRNHADAQRLLEQTRSAGHDLPSLAQIAVDRPANLADVAHGLVRDGIWPSQTGVDPESAGMAY
LLTNQPEAYNPLSVDEIVQVAHAAGGVAILAHPGREKSVYAIPATAADFVALAAIGLDGIEVYYPMHSSEQVAFFVQQAA
LHGFLISAGGDSHGPRDPFSPQPAARCRDLLARFGIDVL
>Mature_279_residues
MLLDLHCHTIATPHHSHWTPTELMAAAQAAGIQVIGIADHNTTSQVTAFAEAAQAAGLDFIGGVEFDSAFNGKLWHTLVY
GANPNDPGILGLCEAVVRRNHADAQRLLEQTRSAGHDLPSLAQIAVDRPANLADVAHGLVRDGIWPSQTGVDPESAGMAY
LLTNQPEAYNPLSVDEIVQVAHAAGGVAILAHPGREKSVYAIPATAADFVALAAIGLDGIEVYYPMHSSEQVAFFVQQAA
LHGFLISAGGDSHGPRDPFSPQPAARCRDLLARFGIDVL

Specific function: Unknown

COG id: COG0613

COG function: function code R; Predicted metal-dependent phosphoesterases (PHP family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trpH family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004013
- InterPro:   IPR003141
- InterPro:   IPR016195 [H]

Pfam domain/function: PF02811 PHP [H]

EC number: NA

Molecular weight: Translated: 29436; Mature: 29436

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLDLHCHTIATPHHSHWTPTELMAAAQAAGIQVIGIADHNTTSQVTAFAEAAQAAGLDF
CEEEEEEHEECCCCCCCCCHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHCCCCC
IGGVEFDSAFNGKLWHTLVYGANPNDPGILGLCEAVVRRNHADAQRLLEQTRSAGHDLPS
CCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCH
LAQIAVDRPANLADVAHGLVRDGIWPSQTGVDPESAGMAYLLTNQPEAYNPLSVDEIVQV
HHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHH
AHAAGGVAILAHPGREKSVYAIPATAADFVALAAIGLDGIEVYYPMHSSEQVAFFVQQAA
HHHCCCEEEEECCCCCCEEEEECCCHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHH
LHGFLISAGGDSHGPRDPFSPQPAARCRDLLARFGIDVL
HHEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MLLDLHCHTIATPHHSHWTPTELMAAAQAAGIQVIGIADHNTTSQVTAFAEAAQAAGLDF
CEEEEEEHEECCCCCCCCCHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHCCCCC
IGGVEFDSAFNGKLWHTLVYGANPNDPGILGLCEAVVRRNHADAQRLLEQTRSAGHDLPS
CCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCH
LAQIAVDRPANLADVAHGLVRDGIWPSQTGVDPESAGMAYLLTNQPEAYNPLSVDEIVQV
HHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHH
AHAAGGVAILAHPGREKSVYAIPATAADFVALAAIGLDGIEVYYPMHSSEQVAFFVQQAA
HHHCCCEEEEECCCCCCEEEEECCCHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHH
LHGFLISAGGDSHGPRDPFSPQPAARCRDLLARFGIDVL
HHEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]